RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 TEX11Q8IYF3 940 aa24.96■■□□□ 1.59
CLN8-213ENST00000637156 STK11IPQ8N1F8 1099 aa24.96■■□□□ 1.59
CLN8-213ENST00000637156 STAG1Q8WVM7 1258 aa24.96■■□□□ 1.59
CLN8-213ENST00000637156 MCM9Q9NXL9 1143 aa24.96■■□□□ 1.59
CLN8-213ENST00000637156 ZBTB12Q9Y330 459 aaPredicted RBP24.96■■□□□ 1.59
CLN8-213ENST00000637156 TRDNQ13061 729 aa24.95■■□□□ 1.58
CLN8-213ENST00000637156 MFSD6Q6ZSS7 791 aa24.95■■□□□ 1.58
CLN8-213ENST00000637156 MAPKAPK5Q8IW41 473 aa24.95■■□□□ 1.58
CLN8-213ENST00000637156 FOXD4L1Q9NU39 408 aa24.95■■□□□ 1.58
CLN8-213ENST00000637156 SERPINA10Q9UK55 444 aa24.95■■□□□ 1.58
CLN8-213ENST00000637156 TPCN1Q9ULQ1 816 aa24.95■■□□□ 1.58
CLN8-213ENST00000637156 NEDD4P46934 1319 aa24.94■■□□□ 1.58
CLN8-213ENST00000637156 SLKQ9H2G2 1235 aaPredicted RBP24.94■■□□□ 1.58
CLN8-213ENST00000637156 USP40Q9NVE5 1235 aa24.94■■□□□ 1.58
CLN8-213ENST00000637156 ZNF646O15015 1829 aaPredicted RBP24.94■■□□□ 1.58
CLN8-213ENST00000637156 B4E1Z4 1266 aa24.94■■□□□ 1.58
CLN8-213ENST00000637156 CYP2D6P10635 497 aa24.94■■□□□ 1.58
CLN8-213ENST00000637156 ANTXR2P58335 489 aa24.94■■□□□ 1.58
CLN8-213ENST00000637156 CDC42EP5Q6NZY7 148 aa24.94■■□□□ 1.58
CLN8-213ENST00000637156 RALYLQ86SE5 291 aaKnown RBP24.94■■□□□ 1.58
CLN8-213ENST00000637156 ANP32EQ9BTT0 268 aa24.94■■□□□ 1.58
CLN8-213ENST00000637156 MYO3BQ8WXR4 1341 aa24.93■■□□□ 1.58
CLN8-213ENST00000637156 MCM5P33992 734 aa24.93■■□□□ 1.58
CLN8-213ENST00000637156 CUL4AQ13619 759 aa24.93■■□□□ 1.58
CLN8-213ENST00000637156 ANKRD1Q15327 319 aa24.93■■□□□ 1.58
CLN8-213ENST00000637156 AGXT2Q9BYV1 514 aa24.93■■□□□ 1.58
CLN8-213ENST00000637156 ARPP21Q9UBL0 812 aaPredicted RBP24.93■■□□□ 1.58
CLN8-213ENST00000637156 LARGE1O95461 756 aa24.92■■□□□ 1.58
CLN8-213ENST00000637156 FGRP09769 529 aa24.92■■□□□ 1.58
CLN8-213ENST00000637156 ME3Q16798 604 aa24.92■■□□□ 1.58
CLN8-213ENST00000637156 C12orf60Q5U649 245 aa24.92■■□□□ 1.58
CLN8-213ENST00000637156 ARHGAP27Q6ZUM4 889 aa24.92■■□□□ 1.58
CLN8-213ENST00000637156 CYB5R4Q7L1T6 521 aa24.92■■□□□ 1.58
CLN8-213ENST00000637156 ZSWIM5Q9P217 1185 aa24.92■■□□□ 1.58
CLN8-213ENST00000637156 WDHD1O75717 1129 aaPredicted RBP24.92■■□□□ 1.58
CLN8-213ENST00000637156 HSP90AA1P07900 732 aaKnown RBP24.92■■□□□ 1.58
CLN8-213ENST00000637156 RBM5P52756 815 aaKnown RBP eCLIP24.92■■□□□ 1.58
CLN8-213ENST00000637156 FBXL16Q8N461 479 aa24.92■■□□□ 1.58
CLN8-213ENST00000637156 FLT1P17948 1338 aa24.91■■□□□ 1.58
CLN8-213ENST00000637156 PRC1O43663 620 aa24.91■■□□□ 1.58
CLN8-213ENST00000637156 SLC4A8Q2Y0W8 1093 aa24.91■■□□□ 1.58
CLN8-213ENST00000637156 CIAPIN1Q6FI81 312 aa24.91■■□□□ 1.58
CLN8-213ENST00000637156 BRF1Q92994 677 aa24.91■■□□□ 1.58
CLN8-213ENST00000637156 RNF41Q9H4P4 317 aaPredicted RBP24.91■■□□□ 1.58
CLN8-213ENST00000637156 CNNM2Q9H8M5 875 aa24.91■■□□□ 1.58
CLN8-213ENST00000637156 GPHNQ9NQX3 736 aaPredicted RBP24.91■■□□□ 1.58
CLN8-213ENST00000637156 PLCD1P51178 756 aa24.9■■□□□ 1.58
CLN8-213ENST00000637156 AGBL3Q8NEM8 1001 aa24.9■■□□□ 1.58
CLN8-213ENST00000637156 KRT23Q9C075 422 aa24.9■■□□□ 1.58
CLN8-213ENST00000637156 FZD9O00144 591 aa24.89■■□□□ 1.58
CLN8-213ENST00000637156 KDM4AO75164 1064 aa24.89■■□□□ 1.58
CLN8-213ENST00000637156 CFAP100Q494V2 611 aa24.89■■□□□ 1.58
CLN8-213ENST00000637156 PRMT6Q96LA8 375 aaPredicted RBP24.89■■□□□ 1.58
CLN8-213ENST00000637156 ZSCAN31Q96LW9 406 aaPredicted RBP24.89■■□□□ 1.58
CLN8-213ENST00000637156 DDX4Q9NQI0 724 aaKnown RBP24.89■■□□□ 1.58
CLN8-213ENST00000637156 SAP30BPQ9UHR5 308 aaKnown RBP24.89■■□□□ 1.58
CLN8-213ENST00000637156 BAZ2AQ9UIF9 1905 aaKnown RBP24.89■■□□□ 1.58
CLN8-213ENST00000637156 ARFGEF1Q9Y6D6 1849 aa24.89■■□□□ 1.57
CLN8-213ENST00000637156 DDIT3P35638 169 aa24.89■■□□□ 1.57
CLN8-213ENST00000637156 FGD1P98174 961 aa24.89■■□□□ 1.57
CLN8-213ENST00000637156 RRP12Q5JTH9 1297 aaKnown RBP24.89■■□□□ 1.57
CLN8-213ENST00000637156 TOMM22Q9NS69 142 aa24.88■■□□□ 1.57
CLN8-213ENST00000637156 WDR19Q8NEZ3 1342 aa24.88■■□□□ 1.57
CLN8-213ENST00000637156 LAMA4Q16363 1823 aa24.87■■□□□ 1.57
CLN8-213ENST00000637156 PRDM1O75626 825 aa24.87■■□□□ 1.57
CLN8-213ENST00000637156 NFIAQ12857 509 aa24.87■■□□□ 1.57
CLN8-213ENST00000637156 PICALMQ13492 652 aa24.87■■□□□ 1.57
CLN8-213ENST00000637156 TNIP1Q15025 636 aa24.87■■□□□ 1.57
CLN8-213ENST00000637156 POLR3DP05423 398 aaPredicted RBP24.87■■□□□ 1.57
CLN8-213ENST00000637156 OGFOD1Q8N543 542 aa24.87■■□□□ 1.57
CLN8-213ENST00000637156 IGDCC4Q8TDY8 1250 aa24.87■■□□□ 1.57
CLN8-213ENST00000637156 SH2B1Q9NRF2 756 aaPredicted RBP24.87■■□□□ 1.57
CLN8-213ENST00000637156 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.87■■□□□ 1.57
CLN8-213ENST00000637156 PCP11498 1178 aaKnown RBP24.86■■□□□ 1.57
CLN8-213ENST00000637156 YBX3P16989 372 aaKnown RBP eCLIP24.86■■□□□ 1.57
CLN8-213ENST00000637156 APOBRQ0VD83 1088 aa24.86■■□□□ 1.57
CLN8-213ENST00000637156 ST3GAL1Q11201 340 aa24.86■■□□□ 1.57
CLN8-213ENST00000637156 DYNLL2Q96FJ2 89 aa24.86■■□□□ 1.57
CLN8-213ENST00000637156 INTS4Q96HW7 963 aaKnown RBP24.86■■□□□ 1.57
CLN8-213ENST00000637156 PSME4Q14997 1843 aa24.86■■□□□ 1.57
CLN8-213ENST00000637156 EVCP57679 992 aa24.85■■□□□ 1.57
CLN8-213ENST00000637156 NECAB1Q8N987 351 aa24.85■■□□□ 1.57
CLN8-213ENST00000637156 TDRD3Q9H7E2 651 aaKnown RBP24.85■■□□□ 1.57
CLN8-213ENST00000637156 HDAC9Q9UKV0 1011 aa24.85■■□□□ 1.57
CLN8-213ENST00000637156 ADAMTSL1Q8N6G6 1762 aa24.85■■□□□ 1.57
CLN8-213ENST00000637156 SLC3A2P08195 630 aaKnown RBP24.85■■□□□ 1.57
CLN8-213ENST00000637156 CACNB3P54284 484 aa24.85■■□□□ 1.57
CLN8-213ENST00000637156 TIAM2Q8IVF5 1701 aa24.84■■□□□ 1.57
CLN8-213ENST00000637156 LMNB1P20700 586 aa24.84■■□□□ 1.57
CLN8-213ENST00000637156 ZFPM1Q8IX07 1006 aa24.84■■□□□ 1.57
CLN8-213ENST00000637156 AMOTL1Q8IY63 956 aa24.84■■□□□ 1.57
CLN8-213ENST00000637156 ESR2Q92731 530 aa24.84■■□□□ 1.57
CLN8-213ENST00000637156 IDI2Q9BXS1 227 aa24.84■■□□□ 1.57
CLN8-213ENST00000637156 ORC4O43929 436 aa24.83■■□□□ 1.57
CLN8-213ENST00000637156 EIF6P56537 245 aaKnown RBP24.83■■□□□ 1.57
CLN8-213ENST00000637156 PDE4BQ07343 736 aa24.83■■□□□ 1.57
CLN8-213ENST00000637156 CCDC83Q8IWF9 413 aa24.83■■□□□ 1.57
CLN8-213ENST00000637156 TMEM87BQ96K49 555 aa24.83■■□□□ 1.57
CLN8-213ENST00000637156 SPDYE2BA6NHP3 402 aa24.83■■□□□ 1.56
CLN8-213ENST00000637156 SPDYE6P0CI01 402 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms