RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 ZNF646O15015 1829 aaPredicted RBP15.97■□□□□ 0.15
PDXDC1-218ENST00000627450 PRC1O43663 620 aa15.97■□□□□ 0.15
PDXDC1-218ENST00000627450 HMGB1P09429 215 aaKnown RBP15.97■□□□□ 0.15
PDXDC1-218ENST00000627450 RBM5P52756 815 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDXDC1-218ENST00000627450 APOBRQ0VD83 1088 aa15.97■□□□□ 0.15
PDXDC1-218ENST00000627450 TRDNQ13061 729 aa15.97■□□□□ 0.15
PDXDC1-218ENST00000627450 CCDC83Q8IWF9 413 aa15.97■□□□□ 0.15
PDXDC1-218ENST00000627450 ATP8A2Q9NTI2 1148 aa15.97■□□□□ 0.15
PDXDC1-218ENST00000627450 SUGT1Q9Y2Z0 365 aa15.97■□□□□ 0.15
PDXDC1-218ENST00000627450 KDM4AO75164 1064 aa15.96■□□□□ 0.15
PDXDC1-218ENST00000627450 ST3GAL1Q11201 340 aa15.96■□□□□ 0.15
PDXDC1-218ENST00000627450 MFSD6Q6ZSS7 791 aa15.96■□□□□ 0.15
PDXDC1-218ENST00000627450 CRKP46108 304 aa15.96■□□□□ 0.15
PDXDC1-218ENST00000627450 PICALMQ13492 652 aa15.96■□□□□ 0.15
PDXDC1-218ENST00000627450 APOBEC3HQ6NTF7 200 aaKnown RBP15.96■□□□□ 0.15
PDXDC1-218ENST00000627450 SLF2Q8IX21 1173 aa15.96■□□□□ 0.15
PDXDC1-218ENST00000627450 TEKT1Q969V4 418 aa15.96■□□□□ 0.15
PDXDC1-218ENST00000627450 ZKSCAN3Q9BRR0 538 aa15.96■□□□□ 0.15
PDXDC1-218ENST00000627450 ZSWIM5Q9P217 1185 aa15.96■□□□□ 0.15
PDXDC1-218ENST00000627450 CDK5RAP2Q96SN8 1893 aa15.96■□□□□ 0.14
PDXDC1-218ENST00000627450 MCM5P33992 734 aa15.95■□□□□ 0.14
PDXDC1-218ENST00000627450 DDIT3P35638 169 aa15.95■□□□□ 0.14
PDXDC1-218ENST00000627450 CACNB3P54284 484 aa15.95■□□□□ 0.14
PDXDC1-218ENST00000627450 CUL4AQ13619 759 aa15.95■□□□□ 0.14
PDXDC1-218ENST00000627450 TMED8Q6PL24 325 aaPredicted RBP15.95■□□□□ 0.14
PDXDC1-218ENST00000627450 RAB11FIP4Q86YS3 637 aa15.95■□□□□ 0.14
PDXDC1-218ENST00000627450 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
PDXDC1-218ENST00000627450 SENP2Q9HC62 589 aa15.95■□□□□ 0.14
PDXDC1-218ENST00000627450 NAP1L2Q9ULW6 460 aaPredicted RBP15.95■□□□□ 0.14
PDXDC1-218ENST00000627450 PLCD1P51178 756 aa15.95■□□□□ 0.14
PDXDC1-218ENST00000627450 PKP1Q13835 747 aa15.95■□□□□ 0.14
PDXDC1-218ENST00000627450 GIMAP6Q6P9H5 292 aa15.94■□□□□ 0.14
PDXDC1-218ENST00000627450 STAG1Q8WVM7 1258 aa15.94■□□□□ 0.14
PDXDC1-218ENST00000627450 DYNLL2Q96FJ2 89 aa15.94■□□□□ 0.14
PDXDC1-218ENST00000627450 ZNRF3Q9ULT6 936 aa15.94■□□□□ 0.14
PDXDC1-218ENST00000627450 CXCL9Q07325 125 aa15.94■□□□□ 0.14
PDXDC1-218ENST00000627450 DDX4Q9NQI0 724 aaKnown RBP15.94■□□□□ 0.14
PDXDC1-218ENST00000627450 USP40Q9NVE5 1235 aa15.94■□□□□ 0.14
PDXDC1-218ENST00000627450 FLT1P17948 1338 aa15.94■□□□□ 0.14
PDXDC1-218ENST00000627450 PPFIA3O75145 1194 aa15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 ANKRD1Q15327 319 aa15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 CDC42EP5Q6NZY7 148 aa15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 SYT17Q9BSW7 474 aa15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 ALDH8A1Q9H2A2 487 aaPredicted RBP15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 ANAPC4Q9UJX5 808 aa15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 IGSF3O75054 1194 aa15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 WDHD1O75717 1129 aaPredicted RBP15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 NFIAQ12857 509 aa15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 RSBN1LQ6PCB5 846 aaPredicted RBP15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 HHIPL2Q6UWX4 724 aa15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 SLC44A5Q8NCS7 719 aa15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 JDP2Q8WYK2 163 aa15.93■□□□□ 0.14
PDXDC1-218ENST00000627450 VIL1P09327 827 aaKnown RBP15.92■□□□□ 0.14
PDXDC1-218ENST00000627450 AGXT2Q9BYV1 514 aa15.92■□□□□ 0.14
PDXDC1-218ENST00000627450 ARPP21Q9UBL0 812 aaPredicted RBP15.92■□□□□ 0.14
PDXDC1-218ENST00000627450 BRPF3Q9ULD4 1205 aa15.92■□□□□ 0.14
PDXDC1-218ENST00000627450 SHTN1A0MZ66 631 aa15.92■□□□□ 0.14
PDXDC1-218ENST00000627450 FKBP1AP62942 108 aaKnown RBP15.92■□□□□ 0.14
PDXDC1-218ENST00000627450 CCT2P78371 535 aaKnown RBP15.92■□□□□ 0.14
PDXDC1-218ENST00000627450 C12orf60Q5U649 245 aa15.92■□□□□ 0.14
PDXDC1-218ENST00000627450 RANBP6O60518 1105 aaKnown RBP15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 POLR3DP05423 398 aaPredicted RBP15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 SLURP2P0DP57 97 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 PLCG2P16885 1265 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 ZDHHC15Q96MV8 337 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 NCOA5Q9HCD5 579 aaKnown RBP15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 FAM47AQ5JRC9 791 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 ARHGAP27Q6ZUM4 889 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 ZFPM1Q8IX07 1006 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 PRMT6Q96LA8 375 aaPredicted RBP15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 ZSCAN31Q96LW9 406 aaPredicted RBP15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 TIAM2Q8IVF5 1701 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 RXRAP19793 462 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 TCP10Q12799 353 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 CFAP100Q494V2 611 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 SBK1Q52WX2 424 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 IGDCC4Q8TDY8 1250 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 GMLQ99445 158 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 KRT23Q9C075 422 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 RNF41Q9H4P4 317 aaPredicted RBP15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 TDRD3Q9H7E2 651 aaKnown RBP15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 CNNM2Q9H8M5 875 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 SH2B1Q9NRF2 756 aaPredicted RBP15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 CHMP5Q9NZZ3 219 aa15.91■□□□□ 0.14
PDXDC1-218ENST00000627450 NAV1Q8NEY1 1877 aa15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 PSME4Q14997 1843 aa15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 SCRN1Q12765 414 aa15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 FOXD4L5Q5VV16 416 aaPredicted RBP15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 FOXD4L4Q8WXT5 416 aaPredicted RBP15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 VPS33BQ9H267 617 aa15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 KLF18A0A0U1RQI7 1052 aa15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 IFIT3O14879 490 aaKnown RBP15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 NMT2O60551 498 aa15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 PDIA3P30101 505 aaKnown RBP15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 INTS4Q96HW7 963 aaKnown RBP15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 MYL10Q9BUA6 226 aa15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 SERPINA10Q9UK55 444 aa15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 MYH1P12882 1939 aa15.9■□□□□ 0.14
PDXDC1-218ENST00000627450 ARFGEF1Q9Y6D6 1849 aa15.89■□□□□ 0.13
PDXDC1-218ENST00000627450 SH2B2O14492 632 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms