RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 CENPHQ9H3R5 247 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 MMRN2Q9H8L6 949 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 USP25Q9UHP3 1055 aa12.48□□□□□ -0.41
VPS8-227ENST00000625842 PFDN6O15212 129 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 XPAP23025 273 aaPredicted RBP12.47□□□□□ -0.41
VPS8-227ENST00000625842 ADCY7P51828 1080 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 ZNF277Q9NRM2 450 aaPredicted RBP12.47□□□□□ -0.41
VPS8-227ENST00000625842 NUB1Q9Y5A7 615 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 PLEKHG1Q9ULL1 1385 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 ZNF335Q9H4Z2 1342 aaPredicted RBP12.47□□□□□ -0.41
VPS8-227ENST00000625842 AKR1B10O60218 316 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 MMP10P09238 476 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 HARSP12081 509 aaKnown RBP12.47□□□□□ -0.41
VPS8-227ENST00000625842 IFFO1Q0D2I5 559 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 GCKRQ14397 625 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 MUM1L1Q5H9M0 696 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 KIFC2Q96AC6 838 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 CSRNP2Q9H175 543 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 F8W8V4 182 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 CFBP00751 764 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 NASPP49321 788 aaPredicted RBP12.47□□□□□ -0.41
VPS8-227ENST00000625842 ALAS1P13196 640 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 FTOQ9C0B1 505 aaKnown RBP eCLIP12.47□□□□□ -0.41
VPS8-227ENST00000625842 CCDC113Q9H0I3 377 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 ATP8A2Q9NTI2 1148 aa12.47□□□□□ -0.41
VPS8-227ENST00000625842 BSDC1Q9NW68 430 aaPredicted RBP12.47□□□□□ -0.41
VPS8-227ENST00000625842 PTPREP23469 700 aa12.46□□□□□ -0.41
VPS8-227ENST00000625842 MRE11P49959 708 aa12.46□□□□□ -0.41
VPS8-227ENST00000625842 PNMA8AQ86V59 439 aaPredicted RBP12.46□□□□□ -0.41
VPS8-227ENST00000625842 ELMOD1Q8N336 334 aa12.46□□□□□ -0.41
VPS8-227ENST00000625842 NACC1Q96RE7 527 aa12.46□□□□□ -0.41
VPS8-227ENST00000625842 JAG2Q9Y219 1238 aa12.46□□□□□ -0.41
VPS8-227ENST00000625842 EPB41P11171 864 aaKnown RBP12.46□□□□□ -0.41
VPS8-227ENST00000625842 UBE4AQ14139 1066 aa12.46□□□□□ -0.41
VPS8-227ENST00000625842 CEP135Q66GS9 1140 aa12.46□□□□□ -0.41
VPS8-227ENST00000625842 GJD4Q96KN9 370 aaPredicted RBP12.46□□□□□ -0.41
VPS8-227ENST00000625842 LMCD1Q9NZU5 365 aa12.46□□□□□ -0.41
VPS8-227ENST00000625842 PARD3Q8TEW0 1356 aa12.46□□□□□ -0.41
VPS8-227ENST00000625842 POTEB2H3BUK9 544 aa12.46□□□□□ -0.42
VPS8-227ENST00000625842 POLR2MP0CAP2 368 aa12.46□□□□□ -0.42
VPS8-227ENST00000625842 EEF2P13639 858 aaKnown RBP12.46□□□□□ -0.42
VPS8-227ENST00000625842 METTL13Q8N6R0 699 aa12.46□□□□□ -0.42
VPS8-227ENST00000625842 FSIP1Q8NA03 581 aa12.46□□□□□ -0.42
VPS8-227ENST00000625842 RASAL2Q9UJF2 1139 aa12.46□□□□□ -0.42
VPS8-227ENST00000625842 CUL4BQ13620 913 aa12.46□□□□□ -0.42
VPS8-227ENST00000625842 LIN9Q5TKA1 542 aa12.46□□□□□ -0.42
VPS8-227ENST00000625842 SV2BQ7L1I2 683 aa12.46□□□□□ -0.42
VPS8-227ENST00000625842 BBS5Q8N3I7 341 aa12.46□□□□□ -0.42
VPS8-227ENST00000625842 PKD2L1Q9P0L9 805 aa12.46□□□□□ -0.42
VPS8-227ENST00000625842 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.46□□□□□ -0.42
VPS8-227ENST00000625842 GOLGA8CPA6NN73 597 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 KIAA0754O94854 1291 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 NT5C2P49902 561 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 SREBF2Q12772 1141 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 SMARCA5O60264 1052 aaPredicted RBP12.45□□□□□ -0.42
VPS8-227ENST00000625842 FOSP01100 380 aaPredicted RBP12.45□□□□□ -0.42
VPS8-227ENST00000625842 A1BGP04217 495 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 GUCY1B3Q02153 619 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 ICA1Q05084 483 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 PPP2R5AQ15172 486 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 SND1Q7KZF4 910 aaKnown RBP eCLIP12.45□□□□□ -0.42
VPS8-227ENST00000625842 RNF214Q8ND24 703 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 JAKMIP2Q96AA8 810 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 SELENOOQ9BVL4 669 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 ATP8B3O60423 1300 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 PRPF4BQ13523 1007 aaKnown RBP12.45□□□□□ -0.42
VPS8-227ENST00000625842 CEP128Q6ZU80 1094 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 FERMT3Q86UX7 667 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 BRF1Q92994 677 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 ZHX1Q9UKY1 873 aaPredicted RBP12.45□□□□□ -0.42
VPS8-227ENST00000625842 MAP2K1Q02750 393 aaPredicted RBP12.45□□□□□ -0.42
VPS8-227ENST00000625842 GABPAQ06546 454 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 ABCB5Q2M3G0 1257 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 APPBP2Q92624 585 aa12.45□□□□□ -0.42
VPS8-227ENST00000625842 A0A1B0GUL7 405 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 USP17L3A6NCW0 530 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 USP17L4A6NCW7 530 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 ZBBXA8MT70 800 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 ZBTB7AO95365 584 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 CYLC1P35663 651 aaPredicted RBP12.44□□□□□ -0.42
VPS8-227ENST00000625842 USP17L1Q7RTZ2 530 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 CGNQ9P2M7 1197 aaKnown RBP12.44□□□□□ -0.42
VPS8-227ENST00000625842 SHTN1A0MZ66 631 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 GIPC1O14908 333 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 USP17L8P0C7I0 530 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 CRKLP46109 303 aaKnown RBP12.44□□□□□ -0.42
VPS8-227ENST00000625842 TMED8Q6PL24 325 aaPredicted RBP12.44□□□□□ -0.42
VPS8-227ENST00000625842 IPO4Q8TEX9 1081 aaKnown RBP12.44□□□□□ -0.42
VPS8-227ENST00000625842 M0R2C6 588 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 DPYSL4O14531 572 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 PCP11498 1178 aaKnown RBP12.44□□□□□ -0.42
VPS8-227ENST00000625842 PLCB3Q01970 1234 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 CCT6BQ92526 530 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 DNM3Q9UQ16 869 aa12.44□□□□□ -0.42
VPS8-227ENST00000625842 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 PDZD4Q76G19 769 aaPredicted RBP12.43□□□□□ -0.42
VPS8-227ENST00000625842 IQUBQ8NA54 791 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 WDR97A6NE52 1622 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 GOLGA6CA6NDK9 693 aa12.43□□□□□ -0.42
VPS8-227ENST00000625842 GOLGA6BA6NDN3 693 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms