RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 SBF1O95248 1867 aa12.64□□□□□ -0.39
CPNE3-212ENST00000621783 CYP2D7A0A087X1C5 515 aa12.64□□□□□ -0.39
CPNE3-212ENST00000621783 MINDY4BA8MYZ0 360 aa12.64□□□□□ -0.39
CPNE3-212ENST00000621783 LMNB1P20700 586 aa12.64□□□□□ -0.39
CPNE3-212ENST00000621783 AK2P54819 239 aa12.64□□□□□ -0.39
CPNE3-212ENST00000621783 EIF6P56537 245 aaKnown RBP12.64□□□□□ -0.39
CPNE3-212ENST00000621783 CTDSPL2Q05D32 466 aa12.64□□□□□ -0.39
CPNE3-212ENST00000621783 APOBEC3HQ6NTF7 200 aaKnown RBP12.64□□□□□ -0.39
CPNE3-212ENST00000621783 CTR9Q6PD62 1173 aa12.64□□□□□ -0.39
CPNE3-212ENST00000621783 MAPKAPK5Q8IW41 473 aa12.64□□□□□ -0.39
CPNE3-212ENST00000621783 AGBL3Q8NEM8 1001 aa12.64□□□□□ -0.39
CPNE3-212ENST00000621783 TGFBRAP1Q8WUH2 860 aa12.64□□□□□ -0.39
CPNE3-212ENST00000621783 ANAPC4Q9UJX5 808 aa12.64□□□□□ -0.39
CPNE3-212ENST00000621783 ZNF541Q9H0D2 1346 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 USP17L12C9JPN9 530 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 USP17L21D6R901 530 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 FZD9O00144 591 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 HMGB1P09429 215 aaKnown RBP12.63□□□□□ -0.39
CPNE3-212ENST00000621783 USP17L8P0C7I0 530 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 CYP2D6P10635 497 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 MCM2P49736 904 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 RBM5P52756 815 aaKnown RBP eCLIP12.63□□□□□ -0.39
CPNE3-212ENST00000621783 EVX2Q03828 476 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 TNIP1Q15025 636 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 CFAP100Q494V2 611 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 SBK1Q52WX2 424 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 AKNAD1Q5T1N1 836 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 CDC42EP5Q6NZY7 148 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 NOL8Q76FK4 1167 aaKnown RBP12.63□□□□□ -0.39
CPNE3-212ENST00000621783 RALYLQ86SE5 291 aaKnown RBP12.63□□□□□ -0.39
CPNE3-212ENST00000621783 MB21D2Q8IYB1 491 aaPredicted RBP12.63□□□□□ -0.39
CPNE3-212ENST00000621783 NCOA7Q8NI08 942 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 STAG1Q8WVM7 1258 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 TCEANC2Q96MN5 208 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 USP40Q9NVE5 1235 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 MCM9Q9NXL9 1143 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 DAXXQ9UER7 740 aaPredicted RBP12.63□□□□□ -0.39
CPNE3-212ENST00000621783 HDAC9Q9UKV0 1011 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 TACC3Q9Y6A5 838 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 ROBO3Q96MS0 1386 aa12.63□□□□□ -0.39
CPNE3-212ENST00000621783 MYH1P12882 1939 aa12.62□□□□□ -0.39
CPNE3-212ENST00000621783 SMIM22K7EJ46 135 aa12.62□□□□□ -0.39
CPNE3-212ENST00000621783 WDHD1O75717 1129 aaPredicted RBP12.62□□□□□ -0.39
CPNE3-212ENST00000621783 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
CPNE3-212ENST00000621783 DHX32Q7L7V1 743 aaKnown RBP12.62□□□□□ -0.39
CPNE3-212ENST00000621783 SAP30BPQ9UHR5 308 aaKnown RBP12.62□□□□□ -0.39
CPNE3-212ENST00000621783 B4E1Z4 1266 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 RPS12P25398 132 aaKnown RBP12.61□□□□□ -0.39
CPNE3-212ENST00000621783 ANTXR2P58335 489 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 TRDNQ13061 729 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 PICALMQ13492 652 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 C12orf60Q5U649 245 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 MFSD6Q6ZSS7 791 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 AMOTL1Q8IY63 956 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 STK11IPQ8N1F8 1099 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 OGFOD1Q8N543 542 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 NKX2-3Q8TAU0 364 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 ALDH8A1Q9H2A2 487 aaPredicted RBP12.61□□□□□ -0.39
CPNE3-212ENST00000621783 RNF41Q9H4P4 317 aaPredicted RBP12.61□□□□□ -0.39
CPNE3-212ENST00000621783 CNNM2Q9H8M5 875 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 DDX4Q9NQI0 724 aaKnown RBP12.61□□□□□ -0.39
CPNE3-212ENST00000621783 INCENPQ9NQS7 918 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 WDR19Q8NEZ3 1342 aa12.61□□□□□ -0.39
CPNE3-212ENST00000621783 SHTN1A0MZ66 631 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 SPDYE2BA6NHP3 402 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 SPDYE6P0CI01 402 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 PCP11498 1178 aaKnown RBP12.6□□□□□ -0.39
CPNE3-212ENST00000621783 MCM5P33992 734 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 GMPSP49915 693 aaPredicted RBP12.6□□□□□ -0.39
CPNE3-212ENST00000621783 EXOSC10Q01780 885 aaKnown RBP12.6□□□□□ -0.39
CPNE3-212ENST00000621783 NFIAQ12857 509 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 TOB2Q14106 344 aaPredicted RBP12.6□□□□□ -0.39
CPNE3-212ENST00000621783 ANKRD1Q15327 319 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 RRP12Q5JTH9 1297 aaKnown RBP12.6□□□□□ -0.39
CPNE3-212ENST00000621783 Q6ZUG5 572 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 CYB5R4Q7L1T6 521 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 CHST3Q7LGC8 479 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 TMX3Q96JJ7 454 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 LRRC2Q9BYS8 371 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 KRT23Q9C075 422 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 RNF181Q9P0P0 153 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.6□□□□□ -0.39
CPNE3-212ENST00000621783 GJA3Q9Y6H8 435 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 SIPA1L1O43166 1804 aa12.6□□□□□ -0.39
CPNE3-212ENST00000621783 PRC1O43663 620 aa12.59□□□□□ -0.39
CPNE3-212ENST00000621783 LARGE1O95461 756 aa12.59□□□□□ -0.39
CPNE3-212ENST00000621783 POLR3DP05423 398 aaPredicted RBP12.59□□□□□ -0.39
CPNE3-212ENST00000621783 SLC3A2P08195 630 aaKnown RBP12.59□□□□□ -0.39
CPNE3-212ENST00000621783 FGRP09769 529 aa12.59□□□□□ -0.39
CPNE3-212ENST00000621783 CACNB3P54284 484 aa12.59□□□□□ -0.39
CPNE3-212ENST00000621783 ZNF280AP59817 542 aaPredicted RBP12.59□□□□□ -0.39
CPNE3-212ENST00000621783 DLGAP5Q15398 846 aa12.59□□□□□ -0.39
CPNE3-212ENST00000621783 MTMR14Q8NCE2 650 aa12.59□□□□□ -0.39
CPNE3-212ENST00000621783 ZBED3Q96IU2 234 aaPredicted RBP12.59□□□□□ -0.39
CPNE3-212ENST00000621783 PRMT6Q96LA8 375 aaPredicted RBP12.59□□□□□ -0.39
CPNE3-212ENST00000621783 LARP6Q9BRS8 491 aaKnown RBP12.59□□□□□ -0.39
CPNE3-212ENST00000621783 IDI2Q9BXS1 227 aa12.59□□□□□ -0.39
CPNE3-212ENST00000621783 AGXT2Q9BYV1 514 aa12.59□□□□□ -0.39
CPNE3-212ENST00000621783 OSBPL5Q9H0X9 879 aaPredicted RBP12.59□□□□□ -0.39
CPNE3-212ENST00000621783 TDRD3Q9H7E2 651 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms