RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 ZNF408Q9H9D4 720 aa13.98□□□□□ -0.17
GTF2I-218ENST00000620879 ZNF771Q7L3S4 317 aaPredicted RBP13.98□□□□□ -0.17
GTF2I-218ENST00000620879 OSBP2Q969R2 916 aa13.98□□□□□ -0.17
GTF2I-218ENST00000620879 RBM28Q9NW13 759 aaKnown RBP13.98□□□□□ -0.17
GTF2I-218ENST00000620879 CDC42BPGQ6DT37 1551 aa13.98□□□□□ -0.17
GTF2I-218ENST00000620879 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
GTF2I-218ENST00000620879 PRKAB2O43741 272 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 POLA2Q14181 598 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 DLGAP5Q15398 846 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 ERMNQ8TAM6 284 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 LLPHQ9BRT6 129 aaKnown RBP13.97□□□□□ -0.17
GTF2I-218ENST00000620879 ZSWIM6Q9HCJ5 1215 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 MAST3O60307 1309 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 ERVV-1B6SEH8 477 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 FGFR1OPO95684 399 aaKnown RBP13.97□□□□□ -0.17
GTF2I-218ENST00000620879 DYNLL1P63167 89 aaKnown RBP13.97□□□□□ -0.17
GTF2I-218ENST00000620879 KIF4BQ2VIQ3 1234 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 RILPL1Q5EBL4 403 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 PPP4R3AQ6IN85 833 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 TEKT1Q969V4 418 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 TNKSO95271 1327 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 CIAO1O76071 339 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 CAVIN2O95810 425 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 GTF3C6Q969F1 213 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 CPS1P31327 1500 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 NEXMIFQ5QGS0 1516 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 ATP2B4P23634 1241 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 ZMYM1Q5SVZ6 1142 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 LEO1Q8WVC0 666 aaPredicted RBP13.97□□□□□ -0.17
GTF2I-218ENST00000620879 STAMQ92783 540 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 PYM1Q9BRP8 204 aaKnown RBP13.97□□□□□ -0.17
GTF2I-218ENST00000620879 MAPK8IP1Q9UQF2 711 aa13.97□□□□□ -0.17
GTF2I-218ENST00000620879 LRRC7Q96NW7 1537 aa13.96□□□□□ -0.17
GTF2I-218ENST00000620879 TNNT1P13805 278 aa13.96□□□□□ -0.17
GTF2I-218ENST00000620879 PUS7LQ9H0K6 701 aaKnown RBP13.96□□□□□ -0.17
GTF2I-218ENST00000620879 MRPL12P52815 198 aaKnown RBP13.96□□□□□ -0.17
GTF2I-218ENST00000620879 TRAF1Q13077 416 aa13.96□□□□□ -0.17
GTF2I-218ENST00000620879 NIM1KQ8IY84 436 aa13.96□□□□□ -0.17
GTF2I-218ENST00000620879 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.96□□□□□ -0.17
GTF2I-218ENST00000620879 DBNDD1Q9H9R9 158 aa13.96□□□□□ -0.17
GTF2I-218ENST00000620879 PTCH1Q13635 1447 aa13.96□□□□□ -0.17
GTF2I-218ENST00000620879 GOLGA8HP0CJ92 632 aa13.96□□□□□ -0.18
GTF2I-218ENST00000620879 FNBP4Q8N3X1 1017 aaPredicted RBP13.96□□□□□ -0.18
GTF2I-218ENST00000620879 PI4K2BQ8TCG2 481 aa13.96□□□□□ -0.18
GTF2I-218ENST00000620879 PSMA7O14818 248 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 BRD1O95696 1058 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 TRIM21P19474 475 aaKnown RBP13.95□□□□□ -0.18
GTF2I-218ENST00000620879 UBE3CQ15386 1083 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 IQUBQ8NA54 791 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 FLAD1Q8NFF5 587 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 UBXN4Q92575 508 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 MMP10P09238 476 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 BTDP43251 543 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 DIXDC1Q155Q3 683 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 THRAP3Q9Y2W1 955 aaKnown RBP13.95□□□□□ -0.18
GTF2I-218ENST00000620879 YEATS4O95619 227 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 CYP19A1P11511 503 aaPredicted RBP13.95□□□□□ -0.18
GTF2I-218ENST00000620879 TXKP42681 527 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 TNNT3P45378 269 aaPredicted RBP13.95□□□□□ -0.18
GTF2I-218ENST00000620879 RASGRF1Q13972 1273 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 USH1GQ495M9 461 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 PAF1Q8N7H5 531 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 GPR108Q9NPR9 543 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 PTPRUQ92729 1446 aa13.95□□□□□ -0.18
GTF2I-218ENST00000620879 NF2P35240 595 aa13.94□□□□□ -0.18
GTF2I-218ENST00000620879 FAM160A1Q05DH4 1040 aa13.94□□□□□ -0.18
GTF2I-218ENST00000620879 UVSSAQ2YD98 709 aa13.94□□□□□ -0.18
GTF2I-218ENST00000620879 KIF18AQ8NI77 898 aa13.94□□□□□ -0.18
GTF2I-218ENST00000620879 POLR2DO15514 142 aaKnown RBP13.94□□□□□ -0.18
GTF2I-218ENST00000620879 ZSCAN12O43309 604 aa13.94□□□□□ -0.18
GTF2I-218ENST00000620879 CYP2D7A0A087X1C5 515 aa13.94□□□□□ -0.18
GTF2I-218ENST00000620879 ACBD3Q9H3P7 528 aa13.94□□□□□ -0.18
GTF2I-218ENST00000620879 RMND1Q9NWS8 449 aa13.94□□□□□ -0.18
GTF2I-218ENST00000620879 SETBP1Q9Y6X0 1596 aa13.94□□□□□ -0.18
GTF2I-218ENST00000620879 M0R2C6 588 aa13.94□□□□□ -0.18
GTF2I-218ENST00000620879 RPS6KA4O75676 772 aa13.94□□□□□ -0.18
GTF2I-218ENST00000620879 ARID4AP29374 1257 aaPredicted RBP13.94□□□□□ -0.18
GTF2I-218ENST00000620879 ZNF772Q68DY9 489 aaPredicted RBP13.94□□□□□ -0.18
GTF2I-218ENST00000620879 LRRC47Q8N1G4 583 aaKnown RBP13.94□□□□□ -0.18
GTF2I-218ENST00000620879 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.94□□□□□ -0.187e-7■■■■■ 85.9
GTF2I-218ENST00000620879 PTGS1P23219 599 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 TEX35Q5T0J7 233 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 PNMA1Q8ND90 353 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 HOMER2Q9NSB8 354 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 KCNH3Q9ULD8 1083 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 XDHP47989 1333 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 TCP10L2B9ZVM9 353 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 KIF5CO60282 957 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 GSDMDP57764 484 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 FANCBQ8NB91 859 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 RBSNQ9H1K0 784 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 CHMP2AO43633 222 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 SKILP12757 684 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 ZSWIM4Q9H7M6 989 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 LMBRD1Q9NUN5 540 aa13.93□□□□□ -0.18
GTF2I-218ENST00000620879 ARPP21Q9UBL0 812 aaPredicted RBP13.93□□□□□ -0.18
GTF2I-218ENST00000620879 TTC38Q5R3I4 469 aa13.92□□□□□ -0.18
GTF2I-218ENST00000620879 BICD1Q96G01 975 aa13.92□□□□□ -0.18
GTF2I-218ENST00000620879 USP28Q96RU2 1077 aa13.92□□□□□ -0.18
GTF2I-218ENST00000620879 GPHNQ9NQX3 736 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms