RNA–Protein interactions for RNA: ENST00000618596.1

GPC5-204, Transcript of glypican 5, humanhuman

TSL 5 BASIC

Gene GPC5, Length 960 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-204ENST00000618596 PCDHAC2Q9Y5I4 1007 aa11.49□□□□□ -0.57
GPC5-204ENST00000618596 TACC3Q9Y6A5 838 aa11.49□□□□□ -0.57
GPC5-204ENST00000618596 FOCADQ5VW36 1801 aa11.49□□□□□ -0.57
GPC5-204ENST00000618596 SMIM22K7EJ46 135 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 PLCG2P16885 1265 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 MCM2P49736 904 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 CXCL9Q07325 125 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 CTR9Q6PD62 1173 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 ARHGAP27Q6ZUM4 889 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 CERS3Q8IU89 383 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 MB21D2Q8IYB1 491 aaPredicted RBP11.48□□□□□ -0.57
GPC5-204ENST00000618596 STK11IPQ8N1F8 1099 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 SPRYD3Q8NCJ5 442 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 NKX2-3Q8TAU0 364 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 TGFBRAP1Q8WUH2 860 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 ZDHHC15Q96MV8 337 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 GMLQ99445 158 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
GPC5-204ENST00000618596 INCENPQ9NQS7 918 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
GPC5-204ENST00000618596 NEDD4P46934 1319 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 MYO3BQ8WXR4 1341 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 ECM29Q5VYK3 1845 aa11.48□□□□□ -0.57
GPC5-204ENST00000618596 FLT1P17948 1338 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 USP17L12C9JPN9 530 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 USP17L21D6R901 530 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 MYCNP04198 464 aaPredicted RBP11.47□□□□□ -0.57
GPC5-204ENST00000618596 HMGB1P09429 215 aaKnown RBP11.47□□□□□ -0.57
GPC5-204ENST00000618596 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 YBX3P16989 372 aaKnown RBP eCLIP11.47□□□□□ -0.57
GPC5-204ENST00000618596 HDLBPQ00341 1268 aaKnown RBP11.47□□□□□ -0.57
GPC5-204ENST00000618596 SLC4A8Q2Y0W8 1093 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 AKNAD1Q5T1N1 836 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 CIAPIN1Q6FI81 312 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 APOBEC3HQ6NTF7 200 aaKnown RBP11.47□□□□□ -0.57
GPC5-204ENST00000618596 CDC42EP5Q6NZY7 148 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 DHX32Q7L7V1 743 aaKnown RBP11.47□□□□□ -0.57
GPC5-204ENST00000618596 RALYLQ86SE5 291 aaKnown RBP11.47□□□□□ -0.57
GPC5-204ENST00000618596 IL27Q8NEV9 243 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 NCOA7Q8NI08 942 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 STAG1Q8WVM7 1258 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 TMX3Q96JJ7 454 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 LRRC2Q9BYS8 371 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 USP40Q9NVE5 1235 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 MCM9Q9NXL9 1143 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 ARPP21Q9UBL0 812 aaPredicted RBP11.47□□□□□ -0.57
GPC5-204ENST00000618596 MKRN1Q9UHC7 482 aaKnown RBP11.47□□□□□ -0.57
GPC5-204ENST00000618596 SAP30BPQ9UHR5 308 aaKnown RBP11.47□□□□□ -0.57
GPC5-204ENST00000618596 ANAPC4Q9UJX5 808 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 SERPINA10Q9UK55 444 aa11.47□□□□□ -0.57
GPC5-204ENST00000618596 ZNF541Q9H0D2 1346 aa11.46□□□□□ -0.57
GPC5-204ENST00000618596 B4E1Z4 1266 aa11.46□□□□□ -0.57
GPC5-204ENST00000618596 RBM5P52756 815 aaKnown RBP eCLIP11.46□□□□□ -0.57
GPC5-204ENST00000618596 ANTXR2P58335 489 aa11.46□□□□□ -0.57
GPC5-204ENST00000618596 EXOSC10Q01780 885 aaKnown RBP11.46□□□□□ -0.57
GPC5-204ENST00000618596 TRDNQ13061 729 aa11.46□□□□□ -0.57
GPC5-204ENST00000618596 TOB2Q14106 344 aaPredicted RBP11.46□□□□□ -0.57
GPC5-204ENST00000618596 CFAP100Q494V2 611 aa11.46□□□□□ -0.57
GPC5-204ENST00000618596 SBK1Q52WX2 424 aa11.46□□□□□ -0.57
GPC5-204ENST00000618596 Q6ZUG5 572 aa11.46□□□□□ -0.57
GPC5-204ENST00000618596 CHST3Q7LGC8 479 aa11.46□□□□□ -0.57
GPC5-204ENST00000618596 MRIQ9BWK5 157 aa11.46□□□□□ -0.57
GPC5-204ENST00000618596 ALDH8A1Q9H2A2 487 aaPredicted RBP11.46□□□□□ -0.57
GPC5-204ENST00000618596 FOXD4L1Q9NU39 408 aa11.46□□□□□ -0.57
GPC5-204ENST00000618596 MYH1P12882 1939 aa11.46□□□□□ -0.58
GPC5-204ENST00000618596 DICER1Q9UPY3 1922 aaKnown RBP11.45□□□□□ -0.58
GPC5-204ENST00000618596 PRC1O43663 620 aa11.45□□□□□ -0.58
GPC5-204ENST00000618596 WDHD1O75717 1129 aaPredicted RBP11.45□□□□□ -0.58
GPC5-204ENST00000618596 LARGE1O95461 756 aa11.45□□□□□ -0.58
GPC5-204ENST00000618596 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
GPC5-204ENST00000618596 PICALMQ13492 652 aa11.45□□□□□ -0.58
GPC5-204ENST00000618596 TNIP1Q15025 636 aa11.45□□□□□ -0.58
GPC5-204ENST00000618596 RRP12Q5JTH9 1297 aaKnown RBP11.45□□□□□ -0.58
GPC5-204ENST00000618596 MFSD6Q6ZSS7 791 aa11.45□□□□□ -0.58
GPC5-204ENST00000618596 CYB5R4Q7L1T6 521 aa11.45□□□□□ -0.58
GPC5-204ENST00000618596 AGBL3Q8NEM8 1001 aa11.45□□□□□ -0.58
GPC5-204ENST00000618596 RNF41Q9H4P4 317 aaPredicted RBP11.45□□□□□ -0.58
GPC5-204ENST00000618596 DDX4Q9NQI0 724 aaKnown RBP11.45□□□□□ -0.58
GPC5-204ENST00000618596 LIMCH1Q9UPQ0 1083 aa11.45□□□□□ -0.58
GPC5-204ENST00000618596 SBF1O95248 1867 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 ROBO3Q96MS0 1386 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 WDR19Q8NEZ3 1342 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 SHTN1A0MZ66 631 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 FZD9O00144 591 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 KDM4AO75164 1064 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 HSP90AA1P07900 732 aaKnown RBP11.44□□□□□ -0.58
GPC5-204ENST00000618596 LMNB1P20700 586 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 MCM5P33992 734 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 CACNB3P54284 484 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 NFIAQ12857 509 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 ANKRD1Q15327 319 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 C12orf60Q5U649 245 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 KRT23Q9C075 422 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 SLKQ9H2G2 1235 aaPredicted RBP11.44□□□□□ -0.58
GPC5-204ENST00000618596 CNNM2Q9H8M5 875 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 GPHNQ9NQX3 736 aaPredicted RBP11.44□□□□□ -0.58
GPC5-204ENST00000618596 TOMM22Q9NS69 142 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 HDAC9Q9UKV0 1011 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 TPCN1Q9ULQ1 816 aa11.44□□□□□ -0.58
GPC5-204ENST00000618596 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms