RNA–Protein interactions for RNA: ENST00000618007.4

TPTE-204, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TPTE, Length 2,150 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-204ENST00000618007 ST5P78524 1137 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 SSRP1Q08945 709 aaKnown RBP13.15□□□□□ -0.3
TPTE-204ENST00000618007 CAMK4Q16566 473 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 OTUD7BQ6GQQ9 843 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 RPGRQ92834 1020 aaKnown RBP13.15□□□□□ -0.3
TPTE-204ENST00000618007 CRNKL1Q9BZJ0 848 aaKnown RBP13.15□□□□□ -0.3
TPTE-204ENST00000618007 RRAGDQ9NQL2 400 aaPredicted RBP13.15□□□□□ -0.3
TPTE-204ENST00000618007 ATP8A2Q9NTI2 1148 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 POLR3EQ9NVU0 708 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 XDHP47989 1333 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 CTAGE5O15320 804 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 YEATS4O95619 227 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 SERPINB2P05120 415 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 POLR3DP05423 398 aaPredicted RBP13.15□□□□□ -0.3
TPTE-204ENST00000618007 FGRP09769 529 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 RXRAP19793 462 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 CLCN1P35523 988 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 ME1P48163 572 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 TRIM29Q14134 588 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 ADALQ6DHV7 355 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 C15orf52Q6ZUT6 534 aaKnown RBP13.15□□□□□ -0.3
TPTE-204ENST00000618007 TXNRD3Q86VQ6 643 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 CCAR1Q8IX12 1150 aaKnown RBP13.15□□□□□ -0.3
TPTE-204ENST00000618007 KCNG4Q8TDN1 519 aa13.15□□□□□ -0.3
TPTE-204ENST00000618007 NID2Q14112 1375 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 STK36Q9NRP7 1315 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 IRS2Q9Y4H2 1338 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 KIF23Q02241 960 aaPredicted RBP13.14□□□□□ -0.31
TPTE-204ENST00000618007 CHAF1AQ13111 956 aaPredicted RBP13.14□□□□□ -0.31
TPTE-204ENST00000618007 CRY2Q49AN0 593 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 MYSM1Q5VVJ2 828 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 LINC00301Q8NCQ3 95 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 BBOX1O75936 387 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
TPTE-204ENST00000618007 SF3A1Q15459 793 aaKnown RBP13.14□□□□□ -0.31
TPTE-204ENST00000618007 KRT40Q6A162 431 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 CTR9Q6PD62 1173 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 CCDC73Q6ZRK6 1079 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 ZSCAN30Q86W11 494 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 CCDC144CPQ8IYA2 1237 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 TDRD7Q8NHU6 1098 aaKnown RBP13.14□□□□□ -0.31
TPTE-204ENST00000618007 PHKBQ93100 1093 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 RBM17Q96I25 401 aaKnown RBP13.14□□□□□ -0.31
TPTE-204ENST00000618007 ZKSCAN3Q9BRR0 538 aa13.14□□□□□ -0.31
TPTE-204ENST00000618007 A0A1W2PQ27 194 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 A0A1W2PQ64 194 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 A0A1W2PQD8 194 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 USP17L12C9JPN9 530 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 USP17L21D6R901 530 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 TRIM37O94972 964 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 CAVIN2O95810 425 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 SLC3A2P08195 630 aaKnown RBP13.13□□□□□ -0.31
TPTE-204ENST00000618007 PRDX5P30044 214 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 RTN1Q16799 776 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 SASS6Q6UVJ0 657 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 ZNF804AQ7Z570 1209 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 IQCA1Q86XH1 822 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 FANCBQ8NB91 859 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 MYL10Q9BUA6 226 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 FTOQ9C0B1 505 aaKnown RBP eCLIP13.13□□□□□ -0.31
TPTE-204ENST00000618007 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
TPTE-204ENST00000618007 A0A1B0GUL6 1792 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 TIAM2Q8IVF5 1701 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 TYRO3Q06418 890 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 STK38Q15208 465 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 SEC23AQ15436 765 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 SBK1Q52WX2 424 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 DZIP1Q86YF9 867 aaKnown RBP13.13□□□□□ -0.31
TPTE-204ENST00000618007 STK11IPQ8N1F8 1099 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 SLC26A6Q9BXS9 759 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 GJB4Q9NTQ9 266 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 PCDHA7Q9UN72 937 aa13.13□□□□□ -0.31
TPTE-204ENST00000618007 CACNA1SQ13698 1873 aa13.12□□□□□ -0.31
TPTE-204ENST00000618007 SPTLC2O15270 562 aa13.12□□□□□ -0.31
TPTE-204ENST00000618007 RANBP6O60518 1105 aaKnown RBP13.12□□□□□ -0.31
TPTE-204ENST00000618007 LDHBP07195 334 aaKnown RBP13.12□□□□□ -0.31
TPTE-204ENST00000618007 ATP2B4P23634 1241 aa13.12□□□□□ -0.31
TPTE-204ENST00000618007 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.31
TPTE-204ENST00000618007 NT5C2P49902 561 aa13.12□□□□□ -0.31
TPTE-204ENST00000618007 GSTO1P78417 241 aa13.12□□□□□ -0.31
TPTE-204ENST00000618007 FAM160A1Q05DH4 1040 aa13.12□□□□□ -0.31
TPTE-204ENST00000618007 SNW1Q13573 536 aaKnown RBP13.12□□□□□ -0.31
TPTE-204ENST00000618007 GNL2Q13823 731 aaKnown RBP13.12□□□□□ -0.31
TPTE-204ENST00000618007 CKAP2LQ8IYA6 745 aa13.12□□□□□ -0.31
TPTE-204ENST00000618007 ZNF654Q8IZM8 581 aa13.12□□□□□ -0.31
TPTE-204ENST00000618007 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
TPTE-204ENST00000618007 ENGASEQ8NFI3 743 aa13.12□□□□□ -0.31
TPTE-204ENST00000618007 FAM200AQ8TCP9 573 aa13.12□□□□□ -0.31
TPTE-204ENST00000618007 ZSCAN10Q96SZ4 725 aaPredicted RBP13.12□□□□□ -0.31
TPTE-204ENST00000618007 DCP1AQ9NPI6 582 aaPredicted RBP13.12□□□□□ -0.31
TPTE-204ENST00000618007 CCDC39Q9UFE4 941 aa13.12□□□□□ -0.31
TPTE-204ENST00000618007 CLIC4Q9Y696 253 aa13.12□□□□□ -0.31
TPTE-204ENST00000618007 KINO60870 393 aaKnown RBP13.11□□□□□ -0.31
TPTE-204ENST00000618007 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
TPTE-204ENST00000618007 ANO1Q5XXA6 986 aa13.11□□□□□ -0.31
TPTE-204ENST00000618007 AIFM3Q96NN9 605 aa13.11□□□□□ -0.31
TPTE-204ENST00000618007 ARPP21Q9UBL0 812 aaPredicted RBP13.11□□□□□ -0.31
TPTE-204ENST00000618007 CASZ1Q86V15 1759 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms