RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 FERMT3Q86UX7 667 aa11.76□□□□□ -0.53
AL353770.3-201ENST00000616253 LY9Q9HBG7 655 aa11.76□□□□□ -0.53
AL353770.3-201ENST00000616253 GDPD2Q9HCC8 539 aa11.76□□□□□ -0.53
AL353770.3-201ENST00000616253 DCP1AQ9NPI6 582 aaPredicted RBP11.76□□□□□ -0.53
AL353770.3-201ENST00000616253 CNPY2Q9Y2B0 182 aa11.76□□□□□ -0.53
AL353770.3-201ENST00000616253 H0YIN7 160 aa11.75□□□□□ -0.53
AL353770.3-201ENST00000616253 IFIT3O14879 490 aaKnown RBP11.75□□□□□ -0.53
AL353770.3-201ENST00000616253 PPFIA3O75145 1194 aa11.75□□□□□ -0.53
AL353770.3-201ENST00000616253 MFSD14BQ5SR56 506 aa11.75□□□□□ -0.53
AL353770.3-201ENST00000616253 STYK1Q6J9G0 422 aa11.75□□□□□ -0.53
AL353770.3-201ENST00000616253 NFXL1Q6ZNB6 911 aa11.75□□□□□ -0.53
AL353770.3-201ENST00000616253 TMX4Q9H1E5 349 aaPredicted RBP11.75□□□□□ -0.53
AL353770.3-201ENST00000616253 ATP8A2Q9NTI2 1148 aa11.75□□□□□ -0.53
AL353770.3-201ENST00000616253 KIF3AQ9Y496 699 aa11.75□□□□□ -0.53
AL353770.3-201ENST00000616253 MROH7-TTC4A0A0A0MT08 1334 aa11.75□□□□□ -0.53
AL353770.3-201ENST00000616253 MYH15Q9Y2K3 1946 aa11.75□□□□□ -0.53
AL353770.3-201ENST00000616253 USP17L12C9JPN9 530 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 USP17L21D6R901 530 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 H3BQV1 296 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 NCLP19338 710 aaKnown RBP11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 FOSBP53539 338 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 APOA5Q6Q788 366 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 SGMS1Q86VZ5 419 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 GPT2Q8TD30 523 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 TBC1D22AQ8WUA7 517 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 PDGFDQ9GZP0 370 aaPredicted RBP11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 COA1Q9GZY4 146 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 ECM29Q5VYK3 1845 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 DHX16O60231 1041 aaKnown RBP11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 LDHCP07864 332 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 CHRNA5P30532 468 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 LIFRP42702 1097 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 METAP2P50579 478 aaKnown RBP eCLIP11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 DNM1Q05193 864 aaKnown RBP11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 SART3Q15020 963 aaKnown RBP11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 USP48Q86UV5 1035 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 MICU3Q86XE3 530 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 TMEM87AQ8NBN3 555 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 SH3RF3Q8TEJ3 882 aaPredicted RBP11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 ZKSCAN3Q9BRR0 538 aa11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 NOL10Q9BSC4 688 aaKnown RBP11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 RTFDC1Q9BY42 306 aaPredicted RBP11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 ZC3H12CQ9C0D7 883 aaKnown RBP11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 ARPP21Q9UBL0 812 aaPredicted RBP11.74□□□□□ -0.53
AL353770.3-201ENST00000616253 FAM205AQ6ZU69 1335 aa11.73□□□□□ -0.53
AL353770.3-201ENST00000616253 CPLX1O14810 134 aa11.73□□□□□ -0.53
AL353770.3-201ENST00000616253 ZBTB43O43298 467 aa11.73□□□□□ -0.53
AL353770.3-201ENST00000616253 FIBPO43427 364 aa11.73□□□□□ -0.53
AL353770.3-201ENST00000616253 BAG3O95817 575 aa11.73□□□□□ -0.53
AL353770.3-201ENST00000616253 RXRAP19793 462 aa11.73□□□□□ -0.53
AL353770.3-201ENST00000616253 USP5P45974 858 aa11.73□□□□□ -0.53
AL353770.3-201ENST00000616253 GTF2IP78347 998 aa11.73□□□□□ -0.53
AL353770.3-201ENST00000616253 EVX2Q03828 476 aa11.73□□□□□ -0.53
AL353770.3-201ENST00000616253 ESR2Q92731 530 aa11.73□□□□□ -0.53
AL353770.3-201ENST00000616253 FBXW7Q969H0 707 aa11.73□□□□□ -0.53
AL353770.3-201ENST00000616253 DLEC1Q9Y238 1755 aa11.73□□□□□ -0.53
AL353770.3-201ENST00000616253 ERICH2A1L162 156 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 CCDC69A6NI79 296 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 PRDM1O75626 825 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 CYP2D6P10635 497 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 FDPSP14324 419 aaKnown RBP11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 BTDP43251 543 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 PPP4CP60510 307 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 WTAPQ15007 396 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 DOK7Q18PE1 504 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 CAVIN1Q6NZI2 390 aaKnown RBP11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 UBAC1Q9BSL1 405 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 MTA3Q9BTC8 594 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 MCM9Q9NXL9 1143 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 SLC12A7Q9Y666 1083 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 DDX60LQ5H9U9 1706 aaKnown RBP11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 GOLGA8AA7E2F4 631 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 RANBP6O60518 1105 aaKnown RBP11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 MBD3O95983 291 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 PCP11498 1178 aaKnown RBP11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 RESTQ13127 1097 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 SBK1Q52WX2 424 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 CCDC144CPQ8IYA2 1237 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 CNKSR1Q969H4 720 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 EYA3Q99504 573 aa11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 ZNF219Q9P2Y4 722 aaPredicted RBP11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
AL353770.3-201ENST00000616253 C10orf71Q711Q0 1435 aa11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 FOCADQ5VW36 1801 aa11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 GADD45BO75293 160 aaPredicted RBP11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 SLC3A2P08195 630 aaKnown RBP11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 FGRP09769 529 aa11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 USP17L8P0C7I0 530 aa11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 SLC4A8Q2Y0W8 1093 aa11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 FAM173BQ6P4H8 233 aa11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 SLF2Q8IX21 1173 aa11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 ORC3Q9UBD5 711 aaPredicted RBP11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 PPP1R1BQ9UD71 204 aaPredicted RBP11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 MKRN1Q9UHC7 482 aaKnown RBP11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 TNKSO95271 1327 aa11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 SRCAPQ6ZRS2 3230 aa11.71□□□□□ -0.53
AL353770.3-201ENST00000616253 NID2Q14112 1375 aa11.71□□□□□ -0.54
AL353770.3-201ENST00000616253 ADAMTSL1Q8N6G6 1762 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms