RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 GPLD1P80108 840 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 ZNF252P-AS1Q0IIN9 211 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 UBAP2LQ14157 1087 aaKnown RBP6.79□□□□□ -1.32
RFC3-203ENST00000616236 NCAPHQ15003 741 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 ZYXQ15942 572 aaKnown RBP6.79□□□□□ -1.32
RFC3-203ENST00000616236 LONRF2Q1L5Z9 754 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 VHLLQ6RSH7 139 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 ADAMTSL4Q6UY14 1074 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 UNC5AQ6ZN44 842 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 SMC5Q8IY18 1101 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 TMEM40Q8WWA1 233 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 PCDHB10Q9UN67 800 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 SLC12A7Q9Y666 1083 aa6.79□□□□□ -1.32
RFC3-203ENST00000616236 LTBP3Q9NS15 1303 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 WASHC2CQ9Y4E1 1318 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 ALG1L2C9J202 215 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 BNIP3LO60238 219 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 ALDH1L1O75891 902 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 HTR3BO95264 441 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 GHRHP01286 108 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 RHBDL3P58872 404 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 SCARF1Q14162 830 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 SLC10A6Q3KNW5 377 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 AXDND1Q5T1B0 1012 aaPredicted RBP6.78□□□□□ -1.32
RFC3-203ENST00000616236 CEP135Q66GS9 1140 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 RIPOR1Q6ZS17 1223 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 VN1R5Q7Z5H4 357 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 PDZD3Q86UT5 571 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 LRRC47Q8N1G4 583 aaKnown RBP6.78□□□□□ -1.32
RFC3-203ENST00000616236 MCM8Q9UJA3 840 aa6.78□□□□□ -1.32
RFC3-203ENST00000616236 SENP3-EIF4A1A0A087X0R7 540 aa6.77□□□□□ -1.33
RFC3-203ENST00000616236 SUSD5O60279 629 aa6.77□□□□□ -1.33
RFC3-203ENST00000616236 RFPL3O75679 317 aa6.77□□□□□ -1.33
RFC3-203ENST00000616236 SMNDC1O75940 238 aaKnown RBP eCLIP6.77□□□□□ -1.33
RFC3-203ENST00000616236 RAPGEF3O95398 923 aa6.77□□□□□ -1.33
RFC3-203ENST00000616236 ACRP10323 421 aa6.77□□□□□ -1.33
RFC3-203ENST00000616236 CD33P20138 364 aa6.77□□□□□ -1.33
RFC3-203ENST00000616236 PMLP29590 882 aa6.77□□□□□ -1.33
RFC3-203ENST00000616236 L1CAMP32004 1257 aa6.77□□□□□ -1.33
RFC3-203ENST00000616236 TTF1Q15361 905 aaPredicted RBP6.77□□□□□ -1.33
RFC3-203ENST00000616236 ZC3H12BQ5HYM0 836 aaKnown RBP6.77□□□□□ -1.33
RFC3-203ENST00000616236 FOXB2Q5VYV0 432 aa6.77□□□□□ -1.33
RFC3-203ENST00000616236 MAP1SQ66K74 1059 aaPredicted RBP6.77□□□□□ -1.33
RFC3-203ENST00000616236 TMED8Q6PL24 325 aaPredicted RBP6.77□□□□□ -1.33
RFC3-203ENST00000616236 RNF180Q86T96 592 aa6.77□□□□□ -1.33
RFC3-203ENST00000616236 TAB3Q8N5C8 712 aaPredicted RBP6.77□□□□□ -1.33
RFC3-203ENST00000616236 RNF166Q96A37 237 aaPredicted RBP6.77□□□□□ -1.33
RFC3-203ENST00000616236 IGFLR1Q9H665 355 aa6.77□□□□□ -1.33
RFC3-203ENST00000616236 SOX13Q9UN79 622 aa6.77□□□□□ -1.33
RFC3-203ENST00000616236 CCDC163A0A0D9SF12 145 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 IQCA1LA6NCM1 817 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 GSG1L2A8MUP6 293 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 SELPP16109 830 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 NFE2Q16621 373 aaPredicted RBP6.76□□□□□ -1.33
RFC3-203ENST00000616236 AKAP4Q5JQC9 854 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 SCARA3Q6AZY7 606 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 KIAA1211LQ6NV74 962 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 ATL2Q8NHH9 583 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 ABHD17AQ96GS6 310 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 SPOCK3Q9BQ16 436 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 NUCKS1Q9H1E3 243 aaKnown RBP6.76□□□□□ -1.33
RFC3-203ENST00000616236 PHAXQ9H814 394 aaKnown RBP6.76□□□□□ -1.33
RFC3-203ENST00000616236 NDFIP2Q9NV92 336 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 DNMT3LQ9UJW3 386 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 CORINQ9Y5Q5 1042 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 PRR36Q9H6K5 1346 aa6.76□□□□□ -1.33
RFC3-203ENST00000616236 FAM86C2PA6NEL3 165 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 SLC22A31A6NKX4 558 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 GFRA2O00451 464 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 TSPAN6O43657 245 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 ESRRAP11474 423 aaPredicted RBP6.75□□□□□ -1.33
RFC3-203ENST00000616236 BMP1P13497 986 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 EIF2AK2P19525 551 aaKnown RBP6.75□□□□□ -1.33
RFC3-203ENST00000616236 EPHB1P54762 984 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 BIRC2Q13490 618 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 PPP2R5AQ15172 486 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 MAP9Q49MG5 647 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 INTS3Q68E01 1043 aaKnown RBP6.75□□□□□ -1.33
RFC3-203ENST00000616236 OVOS1Q6IE37 1185 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 TRIM67Q6ZTA4 783 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 KISS1RQ969F8 398 aaPredicted RBP6.75□□□□□ -1.33
RFC3-203ENST00000616236 ATG4CQ96DT6 458 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 EXOC2Q96KP1 924 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 CLUHP3Q96NS8 147 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 KIF2CQ99661 725 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 EPN3Q9H201 632 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 NCOA5Q9HCD5 579 aaKnown RBP6.75□□□□□ -1.33
RFC3-203ENST00000616236 DNAJB12Q9NXW2 375 aaKnown RBP6.75□□□□□ -1.33
RFC3-203ENST00000616236 GMIPQ9P107 970 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 REV1Q9UBZ9 1251 aa6.75□□□□□ -1.33
RFC3-203ENST00000616236 PLD2O14939 933 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 KIF3BO15066 747 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 EIF3JO75822 258 aaKnown RBP6.74□□□□□ -1.33
RFC3-203ENST00000616236 GSTP1P09211 210 aaKnown RBP6.74□□□□□ -1.33
RFC3-203ENST00000616236 NME1P15531 152 aaKnown RBP6.74□□□□□ -1.33
RFC3-203ENST00000616236 PTPRAP18433 802 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 CCNFP41002 786 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 GUCY2FP51841 1108 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 TBC1D8BQ0IIM8 1120 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 NEUROD1Q13562 356 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms