RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 PRRT2Q7Z6L0 340 aaPredicted RBP4.69□□□□□ -1.66
LINC00649-216ENST00000613667 CXorf38Q8TB03 319 aa4.69□□□□□ -1.66
LINC00649-216ENST00000613667 CORO1BQ9BR76 489 aa4.69□□□□□ -1.66
LINC00649-216ENST00000613667 EPB41L4BQ9H329 900 aa4.69□□□□□ -1.66
LINC00649-216ENST00000613667 SEPT3Q9UH03 358 aa4.69□□□□□ -1.66
LINC00649-216ENST00000613667 ETV2O00321 342 aaPredicted RBP4.68□□□□□ -1.66
LINC00649-216ENST00000613667 PHACTR2O75167 634 aa4.68□□□□□ -1.66
LINC00649-216ENST00000613667 NFKB2Q00653 900 aa4.68□□□□□ -1.66
LINC00649-216ENST00000613667 PROSER2Q86WR7 435 aaPredicted RBP4.68□□□□□ -1.66
LINC00649-216ENST00000613667 SPACA3Q8IXA5 215 aa4.68□□□□□ -1.66
LINC00649-216ENST00000613667 FANCD2OSQ96PS1 177 aa4.68□□□□□ -1.66
LINC00649-216ENST00000613667 DCP1AQ9NPI6 582 aaPredicted RBP4.68□□□□□ -1.66
LINC00649-216ENST00000613667 RTEL1Q9NZ71 1219 aa4.68□□□□□ -1.66
LINC00649-216ENST00000613667 ADAMTS20P59510 1910 aa4.68□□□□□ -1.66
LINC00649-216ENST00000613667 IGHA2P01877 340 aa4.67□□□□□ -1.66
LINC00649-216ENST00000613667 ADRB1P08588 477 aa4.67□□□□□ -1.66
LINC00649-216ENST00000613667 SRFP11831 508 aa4.67□□□□□ -1.66
LINC00649-216ENST00000613667 BMP7P18075 431 aa4.67□□□□□ -1.66
LINC00649-216ENST00000613667 LIG1P18858 919 aa4.67□□□□□ -1.66
LINC00649-216ENST00000613667 FLIIQ13045 1269 aa4.67□□□□□ -1.66
LINC00649-216ENST00000613667 PDE3AQ14432 1141 aa4.67□□□□□ -1.66
LINC00649-216ENST00000613667 FAM214BQ7L5A3 538 aa4.67□□□□□ -1.66
LINC00649-216ENST00000613667 SMYD4Q8IYR2 804 aaPredicted RBP4.67□□□□□ -1.66
LINC00649-216ENST00000613667 SLC26A8Q96RN1 970 aa4.67□□□□□ -1.66
LINC00649-216ENST00000613667 IRF2BPLQ9H1B7 796 aa4.67□□□□□ -1.66
LINC00649-216ENST00000613667 DISC1Q9NRI5 854 aa4.67□□□□□ -1.66
LINC00649-216ENST00000613667 B3GALT4O96024 378 aa4.66□□□□□ -1.66
LINC00649-216ENST00000613667 POLR3DP05423 398 aaPredicted RBP4.66□□□□□ -1.66
LINC00649-216ENST00000613667 TTLL4Q14679 1199 aa4.66□□□□□ -1.66
LINC00649-216ENST00000613667 NKPD1Q17RQ9 610 aa4.66□□□□□ -1.66
LINC00649-216ENST00000613667 CCNJLQ8IV13 435 aa4.66□□□□□ -1.66
LINC00649-216ENST00000613667 TOP6BLQ8N6T0 577 aa4.66□□□□□ -1.66
LINC00649-216ENST00000613667 KCNC2Q96PR1 638 aa4.66□□□□□ -1.66
LINC00649-216ENST00000613667 TCF12Q99081 682 aa4.66□□□□□ -1.66
LINC00649-216ENST00000613667 PIDD1Q9HB75 910 aa4.66□□□□□ -1.66
LINC00649-216ENST00000613667 SLAIN2Q9P270 581 aa4.66□□□□□ -1.66
LINC00649-216ENST00000613667 PCDHGC5Q9Y5F6 944 aa4.66□□□□□ -1.66
LINC00649-216ENST00000613667 HCLS1P14317 486 aaPredicted RBP4.65□□□□□ -1.67
LINC00649-216ENST00000613667 MZF1P28698 734 aaPredicted RBP4.65□□□□□ -1.67
LINC00649-216ENST00000613667 GDNFP39905 211 aa4.65□□□□□ -1.67
LINC00649-216ENST00000613667 SKOR2Q2VWA4 1001 aaPredicted RBP4.65□□□□□ -1.67
LINC00649-216ENST00000613667 DDX54Q8TDD1 881 aaKnown RBP4.65□□□□□ -1.67
LINC00649-216ENST00000613667 SNX29Q8TEQ0 813 aa4.65□□□□□ -1.67
LINC00649-216ENST00000613667 KCNN1Q92952 543 aa4.65□□□□□ -1.67
LINC00649-216ENST00000613667 ATXN3LQ9H3M9 355 aa4.65□□□□□ -1.67
LINC00649-216ENST00000613667 CCDC86Q9H6F5 360 aaKnown RBP4.65□□□□□ -1.67
LINC00649-216ENST00000613667 POLIQ9UNA4 740 aa4.65□□□□□ -1.67
LINC00649-216ENST00000613667 CNTNAP4Q9C0A0 1308 aa4.65□□□□□ -1.67
LINC00649-216ENST00000613667 A0A1W2PP55 124 aa4.64□□□□□ -1.67
LINC00649-216ENST00000613667 ZNF862O60290 1169 aa4.64□□□□□ -1.67
LINC00649-216ENST00000613667 NEFMP07197 916 aa4.64□□□□□ -1.67
LINC00649-216ENST00000613667 PCSK2P16519 638 aa4.64□□□□□ -1.67
LINC00649-216ENST00000613667 ERICH6BQ5W0A0 696 aa4.64□□□□□ -1.67
LINC00649-216ENST00000613667 CCDC120Q96HB5 630 aa4.64□□□□□ -1.67
LINC00649-216ENST00000613667 AMOTL2Q9Y2J4 779 aa4.64□□□□□ -1.67
LINC00649-216ENST00000613667 EIF1AXP47813 144 aaKnown RBP4.63□□□□□ -1.67
LINC00649-216ENST00000613667 ID3Q02535 119 aa4.63□□□□□ -1.67
LINC00649-216ENST00000613667 ELOAQ14241 798 aaKnown RBP4.63□□□□□ -1.67
LINC00649-216ENST00000613667 TTC16Q8NEE8 873 aa4.63□□□□□ -1.67
LINC00649-216ENST00000613667 ZC3H12CQ9C0D7 883 aaKnown RBP4.63□□□□□ -1.67
LINC00649-216ENST00000613667 ZNF576Q9H609 170 aa4.63□□□□□ -1.67
LINC00649-216ENST00000613667 CARS2Q9HA77 564 aaKnown RBP4.63□□□□□ -1.67
LINC00649-216ENST00000613667 IGF2BP3O00425 579 aaKnown RBP eCLIP4.62□□□□□ -1.67
LINC00649-216ENST00000613667 SUV39H1O43463 412 aa4.62□□□□□ -1.67
LINC00649-216ENST00000613667 RNGTTO60942 597 aaKnown RBP4.62□□□□□ -1.67
LINC00649-216ENST00000613667 CELA3BP08861 270 aa4.62□□□□□ -1.67
LINC00649-216ENST00000613667 MPSTP25325 297 aa4.62□□□□□ -1.67
LINC00649-216ENST00000613667 CLCN7P51798 805 aa4.62□□□□□ -1.67
LINC00649-216ENST00000613667 ZXDCQ2QGD7 858 aaPredicted RBP4.62□□□□□ -1.67
LINC00649-216ENST00000613667 NOM1Q5C9Z4 860 aaKnown RBP4.62□□□□□ -1.67
LINC00649-216ENST00000613667 MARCH10Q8NA82 808 aaPredicted RBP4.62□□□□□ -1.67
LINC00649-216ENST00000613667 LIN7BQ9HAP6 207 aa4.62□□□□□ -1.67
LINC00649-216ENST00000613667 ZFYVE28Q9HCC9 887 aa4.62□□□□□ -1.67
LINC00649-216ENST00000613667 GTF2IRD1Q9UHL9 959 aa4.62□□□□□ -1.67
LINC00649-216ENST00000613667 PCOLCE2Q9UKZ9 415 aa4.62□□□□□ -1.67
LINC00649-216ENST00000613667 TMEM164Q5U3C3 297 aa4.61□□□□□ -1.67
LINC00649-216ENST00000613667 HELQQ8TDG4 1101 aa4.61□□□□□ -1.67
LINC00649-216ENST00000613667 ISL2Q96A47 359 aa4.61□□□□□ -1.67
LINC00649-216ENST00000613667 SLFN14P0C7P3 912 aa4.6□□□□□ -1.67
LINC00649-216ENST00000613667 KIF4BQ2VIQ3 1234 aa4.6□□□□□ -1.67
LINC00649-216ENST00000613667 TCERG1LQ5VWI1 586 aa4.6□□□□□ -1.67
LINC00649-216ENST00000613667 BAHD1Q8TBE0 780 aaPredicted RBP4.6□□□□□ -1.67
LINC00649-216ENST00000613667 RBAK-RBAKDNI3L0D1 243 aa4.59□□□□□ -1.67
LINC00649-216ENST00000613667 HNRNPUQ00839 825 aaKnown RBP eCLIP4.59□□□□□ -1.67
LINC00649-216ENST00000613667 AP3B2Q13367 1082 aa4.59□□□□□ -1.67
LINC00649-216ENST00000613667 ABHD4Q8TB40 342 aa4.59□□□□□ -1.67
LINC00649-216ENST00000613667 CLP1Q92989 425 aaKnown RBP4.59□□□□□ -1.67
LINC00649-216ENST00000613667 ATP13A1Q9HD20 1204 aa4.59□□□□□ -1.67
LINC00649-216ENST00000613667 SEMA3GQ9NS98 782 aa4.59□□□□□ -1.67
LINC00649-216ENST00000613667 RAC2P15153 192 aa4.58□□□□□ -1.68
LINC00649-216ENST00000613667 ITPKAP23677 461 aa4.58□□□□□ -1.68
LINC00649-216ENST00000613667 ZNF157P51786 506 aaPredicted RBP4.58□□□□□ -1.68
LINC00649-216ENST00000613667 MTMR3Q13615 1198 aa4.58□□□□□ -1.68
LINC00649-216ENST00000613667 NPAS4Q8IUM7 802 aa4.58□□□□□ -1.68
LINC00649-216ENST00000613667 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.58□□□□□ -1.68
LINC00649-216ENST00000613667 GALNT12Q8IXK2 581 aa4.58□□□□□ -1.68
LINC00649-216ENST00000613667 TRIM13O60858 407 aa4.57□□□□□ -1.68
LINC00649-216ENST00000613667 ERVFC1P60507 584 aa4.57□□□□□ -1.68
LINC00649-216ENST00000613667 SRPK2P78362 688 aaKnown RBP4.57□□□□□ -1.68
LINC00649-216ENST00000613667 FAAP100Q0VG06 881 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms