RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 AEBP2Q6ZN18 517 aaPredicted RBP20.51■□□□□ 0.87
LINC00649-216ENST00000613667 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
LINC00649-216ENST00000613667 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
LINC00649-216ENST00000613667 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
LINC00649-216ENST00000613667 FOXD1Q16676 465 aa16.47■□□□□ 0.23
LINC00649-216ENST00000613667 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
LINC00649-216ENST00000613667 MSH5O43196 834 aa15.7■□□□□ 0.1
LINC00649-216ENST00000613667 PIAS4Q8N2W9 510 aaPredicted RBP15.28■□□□□ 0.04
LINC00649-216ENST00000613667 PLPPR3Q6T4P5 718 aa14.98□□□□□ -0.01
LINC00649-216ENST00000613667 PPP6R1Q9UPN7 881 aa14.95□□□□□ -0.02
LINC00649-216ENST00000613667 ADRA2BP18089 450 aa14.88□□□□□ -0.03
LINC00649-216ENST00000613667 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
LINC00649-216ENST00000613667 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
LINC00649-216ENST00000613667 CACNB1Q02641 598 aaPredicted RBP13.76□□□□□ -0.21
LINC00649-216ENST00000613667 SCAF1Q9H7N4 1312 aaKnown RBP13.73□□□□□ -0.21
LINC00649-216ENST00000613667 DCAF8L1A6NGE4 600 aa13.33□□□□□ -0.28
LINC00649-216ENST00000613667 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
LINC00649-216ENST00000613667 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
LINC00649-216ENST00000613667 C1QBPQ07021 282 aaKnown RBP13.12□□□□□ -0.31
LINC00649-216ENST00000613667 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
LINC00649-216ENST00000613667 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
LINC00649-216ENST00000613667 CNKSR2Q8WXI2 1034 aa12.94□□□□□ -0.34
LINC00649-216ENST00000613667 DNAJC5BQ9UF47 199 aa12.92□□□□□ -0.34
LINC00649-216ENST00000613667 POTEHQ6S545 545 aa12.72□□□□□ -0.37
LINC00649-216ENST00000613667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC00649-216ENST00000613667 NCBP3Q53F19 620 aaKnown RBP12.42□□□□□ -0.42
LINC00649-216ENST00000613667 DSG3P32926 999 aa12.27□□□□□ -0.45
LINC00649-216ENST00000613667 CAPN15O75808 1086 aa12.21□□□□□ -0.45
LINC00649-216ENST00000613667 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
LINC00649-216ENST00000613667 NPM3O75607 178 aaKnown RBP12.2□□□□□ -0.46
LINC00649-216ENST00000613667 SPINK5Q9NQ38 1064 aaPredicted RBP12.17□□□□□ -0.46
LINC00649-216ENST00000613667 APLP2Q06481 763 aa11.93□□□□□ -0.5
LINC00649-216ENST00000613667 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
LINC00649-216ENST00000613667 TRHP20396 242 aaPredicted RBP11.87□□□□□ -0.51
LINC00649-216ENST00000613667 ABCB7O75027 752 aa11.85□□□□□ -0.51
LINC00649-216ENST00000613667 SLC4A2P04920 1241 aa11.8□□□□□ -0.52
LINC00649-216ENST00000613667 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
LINC00649-216ENST00000613667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.77□□□□□ -0.53
LINC00649-216ENST00000613667 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.53
LINC00649-216ENST00000613667 CHRDL2Q6WN34 429 aa11.69□□□□□ -0.54
LINC00649-216ENST00000613667 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
LINC00649-216ENST00000613667 KCNA4P22459 653 aa11.61□□□□□ -0.55
LINC00649-216ENST00000613667 SP7Q8TDD2 431 aaPredicted RBP11.55□□□□□ -0.56
LINC00649-216ENST00000613667 POLA2Q14181 598 aa11.44□□□□□ -0.58
LINC00649-216ENST00000613667 AKT1S1Q96B36 256 aa11.38□□□□□ -0.59
LINC00649-216ENST00000613667 MYCNP04198 464 aaPredicted RBP11.32□□□□□ -0.6
LINC00649-216ENST00000613667 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
LINC00649-216ENST00000613667 ZBTB12Q9Y330 459 aaPredicted RBP11.25□□□□□ -0.61
LINC00649-216ENST00000613667 REM2Q8IYK8 340 aaPredicted RBP11.24□□□□□ -0.61
LINC00649-216ENST00000613667 HAX1O00165 279 aa11.23□□□□□ -0.61
LINC00649-216ENST00000613667 FXR2P51116 673 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC00649-216ENST00000613667 ATF5Q9Y2D1 282 aaPredicted RBP11.13□□□□□ -0.63
LINC00649-216ENST00000613667 PITPNM1O00562 1244 aa11.11□□□□□ -0.63
LINC00649-216ENST00000613667 OSCARQ8IYS5 282 aa11.08□□□□□ -0.64
LINC00649-216ENST00000613667 EVX2Q03828 476 aa10.99□□□□□ -0.65
LINC00649-216ENST00000613667 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
LINC00649-216ENST00000613667 SPDYE2BA6NHP3 402 aa10.83□□□□□ -0.68
LINC00649-216ENST00000613667 SPDYE6P0CI01 402 aa10.83□□□□□ -0.68
LINC00649-216ENST00000613667 PRKAR2AP13861 404 aaKnown RBP10.83□□□□□ -0.68
LINC00649-216ENST00000613667 SPDYE2Q495Y8 402 aa10.83□□□□□ -0.68
LINC00649-216ENST00000613667 LHX8Q68G74 356 aa10.82□□□□□ -0.68
LINC00649-216ENST00000613667 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
LINC00649-216ENST00000613667 C19orf67A6NJJ6 358 aa10.81□□□□□ -0.68
LINC00649-216ENST00000613667 PLSCR2Q9NRY7 297 aa10.81□□□□□ -0.68
LINC00649-216ENST00000613667 GABBR2O75899 941 aa10.77□□□□□ -0.69
LINC00649-216ENST00000613667 SPDYE1Q8NFV5 336 aaPredicted RBP10.77□□□□□ -0.69
LINC00649-216ENST00000613667 CLEC11AQ9Y240 323 aa10.73□□□□□ -0.69
LINC00649-216ENST00000613667 ZBTB22O15209 634 aa10.72□□□□□ -0.69
LINC00649-216ENST00000613667 FBLN2P98095 1184 aa10.71□□□□□ -0.69
LINC00649-216ENST00000613667 ATXN8OSP0DMR3 200 aa10.66□□□□□ -0.7
LINC00649-216ENST00000613667 SSUH2Q9Y2M2 353 aa10.6□□□□□ -0.71
LINC00649-216ENST00000613667 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
LINC00649-216ENST00000613667 ZNF692Q9BU19 519 aaPredicted RBP10.58□□□□□ -0.72
LINC00649-216ENST00000613667 CHADLQ6NUI6 762 aa10.55□□□□□ -0.72
LINC00649-216ENST00000613667 CLCN6P51797 869 aa10.53□□□□□ -0.72
LINC00649-216ENST00000613667 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
LINC00649-216ENST00000613667 POTEIP0CG38 1075 aa10.5□□□□□ -0.73
LINC00649-216ENST00000613667 CD44P16070 742 aaKnown RBP10.46□□□□□ -0.73
LINC00649-216ENST00000613667 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
LINC00649-216ENST00000613667 DCBLD2Q96PD2 775 aa10.39□□□□□ -0.75
LINC00649-216ENST00000613667 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
LINC00649-216ENST00000613667 ZNF579Q8NAF0 562 aaKnown RBP10.29□□□□□ -0.76
LINC00649-216ENST00000613667 OTUD5Q96G74 571 aa10.24□□□□□ -0.77
LINC00649-216ENST00000613667 POTEMA6NI47 508 aa10.22□□□□□ -0.77
LINC00649-216ENST00000613667 ZRANB1Q9UGI0 708 aa10.22□□□□□ -0.77
LINC00649-216ENST00000613667 PCDH10Q9P2E7 1040 aa10.17□□□□□ -0.78
LINC00649-216ENST00000613667 POTEGQ6S5H5 508 aa10.16□□□□□ -0.78
LINC00649-216ENST00000613667 GALR2O43603 387 aaPredicted RBP10.15□□□□□ -0.78
LINC00649-216ENST00000613667 POTEB2H3BUK9 544 aa10.14□□□□□ -0.79
LINC00649-216ENST00000613667 CREBZFQ9NS37 354 aa10.09□□□□□ -0.79
LINC00649-216ENST00000613667 PAK3O75914 559 aaPredicted RBP10.08□□□□□ -0.8
LINC00649-216ENST00000613667 STAG3Q9UJ98 1225 aa10.07□□□□□ -0.8
LINC00649-216ENST00000613667 PHF12Q96QT6 1004 aa10□□□□□ -0.81
LINC00649-216ENST00000613667 PELP1Q8IZL8 1130 aaKnown RBP9.99□□□□□ -0.81
LINC00649-216ENST00000613667 MAMSTRQ6ZN01 415 aa9.98□□□□□ -0.81
LINC00649-216ENST00000613667 C7P10643 843 aa9.96□□□□□ -0.82
LINC00649-216ENST00000613667 SLC39A7Q92504 469 aa9.96□□□□□ -0.82
LINC00649-216ENST00000613667 METRNQ9UJH8 293 aa9.96□□□□□ -0.82
LINC00649-216ENST00000613667 NPM1P06748 294 aaKnown RBP eCLIP9.95□□□□□ -0.82
LINC00649-216ENST00000613667 ASTLQ6HA08 431 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms