RNA–Protein interactions for RNA: ENST00000612798.4

LSP1-217, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 1,881 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-217ENST00000612798 CDK5RAP2Q96SN8 1893 aa20.27■□□□□ 0.83
LSP1-217ENST00000612798 B4E1Z4 1266 aa20.26■□□□□ 0.83
LSP1-217ENST00000612798 TOB2Q14106 344 aaPredicted RBP20.26■□□□□ 0.83
LSP1-217ENST00000612798 CDC42EP5Q6NZY7 148 aa20.26■□□□□ 0.83
LSP1-217ENST00000612798 GIMAP6Q6P9H5 292 aa20.26■□□□□ 0.83
LSP1-217ENST00000612798 EXOSC10Q01780 885 aaKnown RBP20.26■□□□□ 0.83
LSP1-217ENST00000612798 PICALMQ13492 652 aa20.26■□□□□ 0.83
LSP1-217ENST00000612798 CIAPIN1Q6FI81 312 aa20.26■□□□□ 0.83
LSP1-217ENST00000612798 Q6ZUG5 572 aa20.26■□□□□ 0.83
LSP1-217ENST00000612798 DHX32Q7L7V1 743 aaKnown RBP20.26■□□□□ 0.83
LSP1-217ENST00000612798 MB21D2Q8IYB1 491 aaPredicted RBP20.26■□□□□ 0.83
LSP1-217ENST00000612798 TMX3Q96JJ7 454 aa20.26■□□□□ 0.83
LSP1-217ENST00000612798 ZDHHC15Q96MV8 337 aa20.26■□□□□ 0.83
LSP1-217ENST00000612798 GPHNQ9NQX3 736 aaPredicted RBP20.26■□□□□ 0.83
LSP1-217ENST00000612798 SHTN1A0MZ66 631 aa20.25■□□□□ 0.83
LSP1-217ENST00000612798 LARGE1O95461 756 aa20.25■□□□□ 0.83
LSP1-217ENST00000612798 CACNB3P54284 484 aa20.25■□□□□ 0.83
LSP1-217ENST00000612798 CFAP100Q494V2 611 aa20.25■□□□□ 0.83
LSP1-217ENST00000612798 RRP12Q5JTH9 1297 aaKnown RBP20.25■□□□□ 0.83
LSP1-217ENST00000612798 AKNAD1Q5T1N1 836 aa20.25■□□□□ 0.83
LSP1-217ENST00000612798 CYB5R4Q7L1T6 521 aa20.25■□□□□ 0.83
LSP1-217ENST00000612798 NCOA7Q8NI08 942 aa20.25■□□□□ 0.83
LSP1-217ENST00000612798 SLKQ9H2G2 1235 aaPredicted RBP20.25■□□□□ 0.83
LSP1-217ENST00000612798 DDX4Q9NQI0 724 aaKnown RBP20.25■□□□□ 0.83
LSP1-217ENST00000612798 FLT1P17948 1338 aa20.25■□□□□ 0.83
LSP1-217ENST00000612798 PLCG2P16885 1265 aa20.24■□□□□ 0.83
LSP1-217ENST00000612798 ANTXR2P58335 489 aa20.24■□□□□ 0.83
LSP1-217ENST00000612798 PRDM1O75626 825 aa20.24■□□□□ 0.83
LSP1-217ENST00000612798 WDHD1O75717 1129 aaPredicted RBP20.24■□□□□ 0.83
LSP1-217ENST00000612798 MFSD6Q6ZSS7 791 aa20.24■□□□□ 0.83
LSP1-217ENST00000612798 RALYLQ86SE5 291 aaKnown RBP20.24■□□□□ 0.83
LSP1-217ENST00000612798 STAG1Q8WVM7 1258 aa20.24■□□□□ 0.83
LSP1-217ENST00000612798 MRIQ9BWK5 157 aa20.24■□□□□ 0.83
LSP1-217ENST00000612798 TOMM22Q9NS69 142 aa20.24■□□□□ 0.83
LSP1-217ENST00000612798 ANAPC4Q9UJX5 808 aa20.24■□□□□ 0.83
LSP1-217ENST00000612798 SERPINA10Q9UK55 444 aa20.24■□□□□ 0.83
LSP1-217ENST00000612798 TPCN1Q9ULQ1 816 aa20.24■□□□□ 0.83
LSP1-217ENST00000612798 DTNBO60941 627 aa20.23■□□□□ 0.83
LSP1-217ENST00000612798 HMGB1P09429 215 aaKnown RBP20.23■□□□□ 0.83
LSP1-217ENST00000612798 PLCD1P51178 756 aa20.23■□□□□ 0.83
LSP1-217ENST00000612798 HDLBPQ00341 1268 aaKnown RBP20.23■□□□□ 0.83
LSP1-217ENST00000612798 NFIAQ12857 509 aa20.23■□□□□ 0.83
LSP1-217ENST00000612798 TIAM2Q8IVF5 1701 aa20.23■□□□□ 0.83
LSP1-217ENST00000612798 NAV1Q8NEY1 1877 aa20.23■□□□□ 0.83
LSP1-217ENST00000612798 DYNLL2Q96FJ2 89 aa20.23■□□□□ 0.83
LSP1-217ENST00000612798 PRMT6Q96LA8 375 aaPredicted RBP20.23■□□□□ 0.83
LSP1-217ENST00000612798 MYO3BQ8WXR4 1341 aa20.23■□□□□ 0.83
LSP1-217ENST00000612798 FZD9O00144 591 aa20.22■□□□□ 0.83
LSP1-217ENST00000612798 PRC1O43663 620 aa20.22■□□□□ 0.83
LSP1-217ENST00000612798 MCM2P49736 904 aa20.22■□□□□ 0.83
LSP1-217ENST00000612798 TRDNQ13061 729 aa20.22■□□□□ 0.83
LSP1-217ENST00000612798 SBK1Q52WX2 424 aa20.22■□□□□ 0.83
LSP1-217ENST00000612798 TDRD3Q9H7E2 651 aaKnown RBP20.22■□□□□ 0.83
LSP1-217ENST00000612798 ARPP21Q9UBL0 812 aaPredicted RBP20.22■□□□□ 0.83
LSP1-217ENST00000612798 LIMCH1Q9UPQ0 1083 aa20.22■□□□□ 0.83
LSP1-217ENST00000612798 GJA3Q9Y6H8 435 aa20.22■□□□□ 0.83
LSP1-217ENST00000612798 ZNF541Q9H0D2 1346 aa20.22■□□□□ 0.83
LSP1-217ENST00000612798 KDM4AO75164 1064 aa20.22■□□□□ 0.83
LSP1-217ENST00000612798 C12orf60Q5U649 245 aa20.22■□□□□ 0.83
LSP1-217ENST00000612798 CERS3Q8IU89 383 aa20.22■□□□□ 0.83
LSP1-217ENST00000612798 BRF1Q92994 677 aa20.22■□□□□ 0.83
LSP1-217ENST00000612798 POLR3DP05423 398 aaPredicted RBP20.21■□□□□ 0.83
LSP1-217ENST00000612798 ZFPM1Q8IX07 1006 aa20.21■□□□□ 0.83
LSP1-217ENST00000612798 ALDH8A1Q9H2A2 487 aaPredicted RBP20.21■□□□□ 0.83
LSP1-217ENST00000612798 ZSWIM5Q9P217 1185 aa20.21■□□□□ 0.83
LSP1-217ENST00000612798 HSP90AA1P07900 732 aaKnown RBP20.2■□□□□ 0.82
LSP1-217ENST00000612798 MCM5P33992 734 aa20.2■□□□□ 0.82
LSP1-217ENST00000612798 EIF6P56537 245 aaKnown RBP20.2■□□□□ 0.82
LSP1-217ENST00000612798 FGD1P98174 961 aa20.2■□□□□ 0.82
LSP1-217ENST00000612798 TNIP1Q15025 636 aa20.2■□□□□ 0.82
LSP1-217ENST00000612798 ME3Q16798 604 aa20.2■□□□□ 0.82
LSP1-217ENST00000612798 AGBL3Q8NEM8 1001 aa20.2■□□□□ 0.82
LSP1-217ENST00000612798 ZKSCAN3Q9BRR0 538 aa20.2■□□□□ 0.82
LSP1-217ENST00000612798 LAMB1P07942 1786 aa20.2■□□□□ 0.82
LSP1-217ENST00000612798 LMNB1P20700 586 aa20.2■□□□□ 0.82
LSP1-217ENST00000612798 APOBRQ0VD83 1088 aa20.2■□□□□ 0.82
LSP1-217ENST00000612798 TCP10Q12799 353 aa20.2■□□□□ 0.82
LSP1-217ENST00000612798 NECAB1Q8N987 351 aa20.2■□□□□ 0.82
LSP1-217ENST00000612798 FOCADQ5VW36 1801 aa20.19■□□□□ 0.82
LSP1-217ENST00000612798 STK3Q13188 491 aa20.19■□□□□ 0.82
LSP1-217ENST00000612798 OGFOD1Q8N543 542 aa20.19■□□□□ 0.82
LSP1-217ENST00000612798 SLC44A5Q8NCS7 719 aa20.19■□□□□ 0.82
LSP1-217ENST00000612798 SENP2Q9HC62 589 aa20.19■□□□□ 0.82
LSP1-217ENST00000612798 HDAC9Q9UKV0 1011 aa20.19■□□□□ 0.82
LSP1-217ENST00000612798 ECM29Q5VYK3 1845 aa20.19■□□□□ 0.82
LSP1-217ENST00000612798 DDX60LQ5H9U9 1706 aaKnown RBP20.18■□□□□ 0.82
LSP1-217ENST00000612798 SOCS7O14512 581 aa20.18■□□□□ 0.82
LSP1-217ENST00000612798 SLURP2P0DP57 97 aa20.18■□□□□ 0.82
LSP1-217ENST00000612798 GMPSP49915 693 aaPredicted RBP20.18■□□□□ 0.82
LSP1-217ENST00000612798 ST3GAL1Q11201 340 aa20.18■□□□□ 0.82
LSP1-217ENST00000612798 KRT23Q9C075 422 aa20.18■□□□□ 0.82
LSP1-217ENST00000612798 RNF41Q9H4P4 317 aaPredicted RBP20.18■□□□□ 0.82
LSP1-217ENST00000612798 FAM198AQ9UFP1 575 aa20.18■□□□□ 0.82
LSP1-217ENST00000612798 SBF1O95248 1867 aa20.18■□□□□ 0.82
LSP1-217ENST00000612798 MYH1P12882 1939 aa20.18■□□□□ 0.82
LSP1-217ENST00000612798 CLRN2A0PK11 232 aa20.18■□□□□ 0.82
LSP1-217ENST00000612798 SPDYE2BA6NHP3 402 aa20.18■□□□□ 0.82
LSP1-217ENST00000612798 EGFRP00533 1210 aa20.18■□□□□ 0.82
LSP1-217ENST00000612798 SPDYE6P0CI01 402 aa20.18■□□□□ 0.82
LSP1-217ENST00000612798 DLGAP5Q15398 846 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 226.3 ms