RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 OGFOD1Q8N543 542 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 AOPEPQ8N6M6 819 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 IL17REQ8NFR9 667 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 SUDS3Q9H7L9 328 aaPredicted RBP10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 NCOA5Q9HCD5 579 aaKnown RBP10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 B4E1Z4 1266 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 PRDM1O75626 825 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 GNG11P61952 73 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 PPP4R3BQ5MIZ7 849 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 N4BP2L2Q92802 583 aaPredicted RBP10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 OLA1Q9NTK5 396 aaKnown RBP10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 KLF15Q9UIH9 416 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 TMEM2Q9UHN6 1383 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 SPTLC2O15270 562 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 SKILP12757 684 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 GNAT2P19087 354 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 NBPF14Q5TI25 921 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 ANAPC4Q9UJX5 808 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 ZMYM4Q5VZL5 1548 aa10.64□□□□□ -0.71
SRGAP2B-204ENST00000612199 STAT6P42226 847 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 UBASH3AP57075 661 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 EIF4A1P60842 406 aaKnown RBP10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 KIF22Q14807 665 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 LRRC43Q8N309 656 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 RNF169Q8NCN4 708 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 XAGE2Q96GT9 111 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 PLIN2Q99541 437 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 NOLC1Q14978 699 aaKnown RBP eCLIP10.63□□□□□ -0.713e-19■■□□□ 13.2
SRGAP2B-204ENST00000612199 CCDC14Q49A88 953 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 PDCD7Q8N8D1 485 aaKnown RBP10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 MICAL1Q8TDZ2 1067 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 MOSPD1Q9UJG1 213 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 SH3TC1Q8TE82 1336 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 RNF123Q5XPI4 1314 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 ERICH4A6NGS2 130 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 MKRN1Q9UHC7 482 aaKnown RBP10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 SAP30BPQ9UHR5 308 aaKnown RBP10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 GAS8O95995 478 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 LDHBP07195 334 aaKnown RBP10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 PDE1CQ14123 709 aaPredicted RBP10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 GCKRQ14397 625 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 ATL3Q6DD88 541 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 TTC12Q9H892 705 aaPredicted RBP10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 ARMT1Q9H993 441 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 SYNDIG1LA6NDD5 238 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 ARID4AP29374 1257 aaPredicted RBP10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 SLAIN2Q9P270 581 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 KDM2BQ8NHM5 1336 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 TRIM75PA6NK02 468 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 CALM1P0DP23 149 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 CALM2P0DP24 149 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 CALM3P0DP25 149 aa10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 CCNL1Q9UK58 526 aaPredicted RBP10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.63□□□□□ -0.71
SRGAP2B-204ENST00000612199 AKR1B10O60218 316 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 OCM2P0CE71 109 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 OCMP0CE72 109 aaPredicted RBP10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 BZW2Q9Y6E2 419 aaKnown RBP10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 PLEKHG3A1L390 1219 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 FSD2A1L4K1 749 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 EXOC1Q9NV70 894 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 STX17P56962 302 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 IFRD2Q12894 506 aaPredicted RBP10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 TRAPPC3LQ5T215 181 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 MSL1Q68DK7 614 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 BRAPQ7Z569 592 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 AOX1Q06278 1338 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 MCM7P33993 719 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 KRT33BQ14525 404 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 PALM2Q8IXS6 379 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 KDM6BO15054 1643 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 TMEM110-MUSTN1A8MSY1 372 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 SLC27A2O14975 620 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 TNNI2P48788 182 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 OTUD7BQ6GQQ9 843 aa10.62□□□□□ -0.71
SRGAP2B-204ENST00000612199 TYRO3Q06418 890 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 ERMNQ8TAM6 284 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 CLNS1AP54105 237 aaKnown RBP10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 UGGT1Q9NYU2 1555 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 A0A1B0GVL5 298 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 A0A1W2PRG0 241 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 CALML3P27482 149 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 EIF6P56537 245 aaKnown RBP10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 CNBD1Q8NA66 436 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 TRIM6Q9C030 488 aaPredicted RBP10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 LMCD1Q9NZU5 365 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 SNX14Q9Y5W7 946 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 RTL1A6NKG5 1358 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 PSMA7O14818 248 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 SLC4A1P02730 911 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 SWAP70Q9UH65 585 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 MAGI2Q86UL8 1455 aa10.61□□□□□ -0.71
SRGAP2B-204ENST00000612199 GPAA1O43292 621 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 PTGS1P23219 599 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 ASIC1P78348 528 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 PSMD6Q15008 389 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 MYL10Q9BUA6 226 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 USP44Q9H0E7 712 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms