RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 A0A1B0GVL5 298 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 KIF28PB7ZC32 967 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 SNAP23O00161 211 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 NEMFO60524 1076 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 PPFIA3O75145 1194 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 CYP7A1P22680 504 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 NDUFA8P51970 172 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 CTDSPL2Q05D32 466 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 GNL2Q13823 731 aaKnown RBP12.09□□□□□ -0.47
PABPC1-224ENST00000610907 WTAPQ15007 396 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 ERFEQ4G0M1 354 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 AXDND1Q5T1B0 1012 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-224ENST00000610907 MICU3Q86XE3 530 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 DRC7Q8IY82 874 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 TRIM22Q8IYM9 498 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 SPC24Q8NBT2 197 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 DYNC1I1O14576 645 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 RRP9O43818 475 aaKnown RBP12.09□□□□□ -0.47
PABPC1-224ENST00000610907 ZNF202O95125 648 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 PPARAQ07869 468 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 DHX8Q14562 1220 aaKnown RBP12.09□□□□□ -0.47
PABPC1-224ENST00000610907 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
PABPC1-224ENST00000610907 VPS72Q15906 364 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 DNTTIP2Q5QJE6 756 aaKnown RBP12.09□□□□□ -0.47
PABPC1-224ENST00000610907 RAB11FIP4Q86YS3 637 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 ELOA2Q8IYF1 753 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-224ENST00000610907 PIAS4Q8N2W9 510 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-224ENST00000610907 ESR2Q92731 530 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.09□□□□□ -0.47
PABPC1-224ENST00000610907 BRIP1Q9BX63 1249 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 KCNF1Q9H3M0 494 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 MINPP1Q9UNW1 487 aa12.09□□□□□ -0.47
PABPC1-224ENST00000610907 NUTM2BA6NNL0 878 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-224ENST00000610907 NUTM2EB1AL46 878 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-224ENST00000610907 KCNQ2O43526 872 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 PRKAB2O43741 272 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 RANBP6O60518 1105 aaKnown RBP12.08□□□□□ -0.48
PABPC1-224ENST00000610907 CUTAO60888 179 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 SLC3A2P08195 630 aaKnown RBP12.08□□□□□ -0.48
PABPC1-224ENST00000610907 NT5C2P49902 561 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 RTN1Q16799 776 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 C11orf57Q6ZUT1 292 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-224ENST00000610907 CCDC186Q7Z3E2 898 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 NUTM2AQ8IVF1 878 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-224ENST00000610907 LINC00116Q8NCU8 138 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 NKX2-3Q8TAU0 364 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 NOL10Q9BSC4 688 aaKnown RBP12.08□□□□□ -0.48
PABPC1-224ENST00000610907 ANKRD2Q9GZV1 360 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 SENP2Q9HC62 589 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 NARFQ9UHQ1 456 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 HPSEQ9Y251 543 aa12.08□□□□□ -0.48
PABPC1-224ENST00000610907 RPS6KA4O75676 772 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 DEXIO95424 95 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
PABPC1-224ENST00000610907 HSPA1LP34931 641 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 PTPAQ15257 358 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 FBXO33Q7Z6M2 555 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 DHX40Q8IX18 779 aaKnown RBP12.07□□□□□ -0.48
PABPC1-224ENST00000610907 CRACR2BQ8N4Y2 399 aaPredicted RBP12.07□□□□□ -0.48
PABPC1-224ENST00000610907 MPNDQ8N594 471 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 PHKBQ93100 1093 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 MAP3K14Q99558 947 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 RIOK1Q9BRS2 568 aaKnown RBP12.07□□□□□ -0.48
PABPC1-224ENST00000610907 UBAC1Q9BSL1 405 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 SLC26A6Q9BXS9 759 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 FOXP1Q9H334 677 aaPredicted RBP12.07□□□□□ -0.48
PABPC1-224ENST00000610907 GJB4Q9NTQ9 266 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 RAI14Q9P0K7 980 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 TACC3Q9Y6A5 838 aa12.07□□□□□ -0.48
PABPC1-224ENST00000610907 MORC2Q9Y6X9 1032 aaPredicted RBP12.07□□□□□ -0.48
PABPC1-224ENST00000610907 SMTNL1A8MU46 457 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 MMP1P03956 469 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 FGRP09769 529 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 PFKFB1P16118 471 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 PTGS1P23219 599 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 NLRP12P59046 1061 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 RPS8P62241 208 aaKnown RBP12.06□□□□□ -0.48
PABPC1-224ENST00000610907 TPM4P67936 248 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 RILPL1Q5EBL4 403 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 NOSTRINQ8IVI9 506 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 MIGA1Q8NAN2 632 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 FANCBQ8NB91 859 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 MYRIPQ8NFW9 859 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 FAM84BQ96KN1 310 aaPredicted RBP12.06□□□□□ -0.48
PABPC1-224ENST00000610907 AIFM3Q96NN9 605 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 NLRP3Q96P20 1036 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 INCENPQ9NQS7 918 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 ABCF2Q9UG63 623 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 SCN7AQ01118 1682 aa12.06□□□□□ -0.48
PABPC1-224ENST00000610907 A0A1B0GUL6 1792 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 UQCRHLA0A096LP55 91 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 WDHD1O75717 1129 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-224ENST00000610907 UQCRHP07919 91 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 CALM1P0DP23 149 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 CALM2P0DP24 149 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 CALM3P0DP25 149 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 RXRAP19793 462 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 SYKP43405 635 aa12.05□□□□□ -0.48
PABPC1-224ENST00000610907 GYG1P46976 350 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms