RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 PTPRTO14522 1441 aa10.25□□□□□ -0.77
COL25A1-208ENST00000610288 MAP3K5Q99683 1374 aa10.25□□□□□ -0.77
COL25A1-208ENST00000610288 ACTN2P35609 894 aa10.25□□□□□ -0.77
COL25A1-208ENST00000610288 MTX1Q13505 466 aa10.25□□□□□ -0.77
COL25A1-208ENST00000610288 CACTINQ8WUQ7 758 aaKnown RBP10.25□□□□□ -0.77
COL25A1-208ENST00000610288 OSBPL3Q9H4L5 887 aa10.25□□□□□ -0.77
COL25A1-208ENST00000610288 BABAM1Q9NWV8 329 aa10.25□□□□□ -0.77
COL25A1-208ENST00000610288 PPP1R2P41236 205 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 CHST3Q7LGC8 479 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 CTNNBL1Q8WYA6 563 aaPredicted RBP10.24□□□□□ -0.77
COL25A1-208ENST00000610288 CABP5Q9NP86 173 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 DDX41Q9UJV9 622 aaKnown RBP10.24□□□□□ -0.77
COL25A1-208ENST00000610288 PCK1P35558 622 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 TTLL12Q14166 644 aaPredicted RBP10.24□□□□□ -0.77
COL25A1-208ENST00000610288 DDB1Q16531 1140 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 IFT74Q96LB3 600 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 MAP3K19Q56UN5 1328 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 KIAA0232Q92628 1395 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 PNMA6EA0A0J9YXQ4 647 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 MACROD2A1Z1Q3 448 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 RUFY4Q6ZNE9 571 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 IFT20Q8IY31 132 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 EXOC4Q96A65 974 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 SELENOSQ9BQE4 189 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 ZSWIM6Q9HCJ5 1215 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 PPP2R2CQ9Y2T4 447 aa10.24□□□□□ -0.77
COL25A1-208ENST00000610288 TSPY3P0CV98 308 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 TSPY8P0CW00 308 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 PEX19P40855 299 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 ASIC1P78348 528 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 GSTO1P78417 241 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 PPFIBP2Q8ND30 876 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 CABS1Q96KC9 395 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 CAPN7Q9Y6W3 813 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 LUC7L3O95232 432 aaKnown RBP10.23□□□□□ -0.77
COL25A1-208ENST00000610288 KRT9P35527 623 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 CCT6AP40227 531 aaKnown RBP10.23□□□□□ -0.77
COL25A1-208ENST00000610288 RBM6P78332 1123 aaKnown RBP10.23□□□□□ -0.77
COL25A1-208ENST00000610288 E2F4Q16254 413 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 TSNAXIP1Q2TAA8 658 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 LRRC45Q96CN5 670 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 NLRP3Q96P20 1036 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 ODF2LQ9ULJ1 636 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 A0A1W2PRG0 241 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 GCP02774 474 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 CALML3P27482 149 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 WDR78Q5VTH9 848 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 JAKMIP2Q96AA8 810 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 NRBP1Q9UHY1 535 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 NIP7Q9Y221 180 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL25A1-208ENST00000610288 SYNRGQ9UMZ2 1314 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 ABCC1P33527 1531 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 JAK2O60674 1132 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 MAP3K9P80192 1104 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 TFCP2Q12800 502 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 ZNF365Q70YC5 407 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 FAM227BQ96M60 508 aa10.23□□□□□ -0.77
COL25A1-208ENST00000610288 MAGI2Q86UL8 1455 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 KCNA6P17658 529 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 IL13P35225 146 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 GNAQP50148 359 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 ATP11AP98196 1134 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 NCBP1Q09161 790 aaKnown RBP10.22□□□□□ -0.77
COL25A1-208ENST00000610288 SND1Q7KZF4 910 aaKnown RBP eCLIP10.22□□□□□ -0.77
COL25A1-208ENST00000610288 TMEM87AQ8NBN3 555 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 SETDB2Q96T68 719 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 NUP58Q9BVL2 599 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 MTRF1LQ9UGC7 380 aaKnown RBP10.22□□□□□ -0.77
COL25A1-208ENST00000610288 PHLPP2Q6ZVD8 1323 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 IRX1P78414 480 aaPredicted RBP10.22□□□□□ -0.77
COL25A1-208ENST00000610288 PAK2Q13177 524 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 LRRC23Q53EV4 343 aaPredicted RBP10.22□□□□□ -0.77
COL25A1-208ENST00000610288 PPP1R13BQ96KQ4 1090 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 CEP63Q96MT8 703 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 TRIM6Q9C030 488 aaPredicted RBP10.22□□□□□ -0.77
COL25A1-208ENST00000610288 SBNO2Q9Y2G9 1366 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 CALM1P0DP23 149 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 CALM2P0DP24 149 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 CALM3P0DP25 149 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 KRT2P35908 639 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 SLFNL1Q499Z3 407 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 STXBP4Q6ZWJ1 553 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 HELBQ8NG08 1087 aaPredicted RBP10.22□□□□□ -0.77
COL25A1-208ENST00000610288 VPS16Q9H269 839 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 CCDC151A5D8V7 595 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 STX10O60499 249 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 PPFIA4O75335 1185 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 GIGYF1O75420 1035 aaPredicted RBP10.22□□□□□ -0.77
COL25A1-208ENST00000610288 HOXB7P09629 217 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 HOXC9P31274 260 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 TBC1D8BQ0IIM8 1120 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 NBPF14Q5TI25 921 aa10.22□□□□□ -0.77
COL25A1-208ENST00000610288 IL2RBP14784 551 aa10.21□□□□□ -0.77
COL25A1-208ENST00000610288 ZSCAN20P17040 1043 aaPredicted RBP10.21□□□□□ -0.77
COL25A1-208ENST00000610288 HPDP32754 393 aaPredicted RBP10.21□□□□□ -0.77
COL25A1-208ENST00000610288 RAD51AP2Q09MP3 1159 aa10.21□□□□□ -0.77
COL25A1-208ENST00000610288 CROCCP2Q86T23 111 aa10.21□□□□□ -0.77
COL25A1-208ENST00000610288 SYCP3Q8IZU3 236 aa10.21□□□□□ -0.77
COL25A1-208ENST00000610288 RTL9Q8NET4 1388 aa10.21□□□□□ -0.77
COL25A1-208ENST00000610288 CCDC26Q8TAB7 109 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms