RNA–Protein interactions for RNA: ENST00000603844.1

FOCAD-210, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-210ENST00000603844 LOC105371045A0A1W2PR82 267 aa7.99□□□□□ -1.13
FOCAD-210ENST00000603844 ZNF211Q13398 564 aaPredicted RBP7.99□□□□□ -1.13
FOCAD-210ENST00000603844 FBLN7Q53RD9 439 aa7.99□□□□□ -1.13
FOCAD-210ENST00000603844 PIDD1Q9HB75 910 aa7.99□□□□□ -1.13
FOCAD-210ENST00000603844 MKNK2Q9HBH9 465 aa7.99□□□□□ -1.13
FOCAD-210ENST00000603844 ANO2Q9NQ90 1003 aa7.99□□□□□ -1.13
FOCAD-210ENST00000603844 ADAMTS6Q9UKP5 1117 aa7.99□□□□□ -1.13
FOCAD-210ENST00000603844 KIF21BO75037 1637 aa7.99□□□□□ -1.13
FOCAD-210ENST00000603844 GOLGA3Q08378 1498 aa7.99□□□□□ -1.13
FOCAD-210ENST00000603844 TDRD9Q8NDG6 1382 aaKnown RBP7.98□□□□□ -1.13
FOCAD-210ENST00000603844 SLFN14P0C7P3 912 aa7.98□□□□□ -1.13
FOCAD-210ENST00000603844 LIG1P18858 919 aa7.98□□□□□ -1.13
FOCAD-210ENST00000603844 PKN1Q16512 942 aa7.98□□□□□ -1.13
FOCAD-210ENST00000603844 RPS26P11Q5JNZ5 115 aaPredicted RBP7.98□□□□□ -1.13
FOCAD-210ENST00000603844 SPOCD1Q6ZMY3 1216 aa7.98□□□□□ -1.13
FOCAD-210ENST00000603844 PI4K2BQ8TCG2 481 aa7.98□□□□□ -1.13
FOCAD-210ENST00000603844 WDR89Q96FK6 387 aaPredicted RBP7.98□□□□□ -1.13
FOCAD-210ENST00000603844 FANCD2OSQ96PS1 177 aa7.98□□□□□ -1.13
FOCAD-210ENST00000603844 CCDC86Q9H6F5 360 aaKnown RBP7.98□□□□□ -1.13
FOCAD-210ENST00000603844 ID3Q02535 119 aa7.97□□□□□ -1.13
FOCAD-210ENST00000603844 IFI16Q16666 785 aaKnown RBP7.97□□□□□ -1.13
FOCAD-210ENST00000603844 KSR1Q8IVT5 923 aa7.97□□□□□ -1.13
FOCAD-210ENST00000603844 SMYD4Q8IYR2 804 aaPredicted RBP7.97□□□□□ -1.13
FOCAD-210ENST00000603844 LRRN4CLQ8ND94 238 aa7.97□□□□□ -1.13
FOCAD-210ENST00000603844 GAPVD1Q14C86 1478 aa7.97□□□□□ -1.13
FOCAD-210ENST00000603844 PPP1R15AO75807 674 aaPredicted RBP7.96□□□□□ -1.14
FOCAD-210ENST00000603844 PRPF40BQ6NWY9 871 aaKnown RBP7.96□□□□□ -1.14
FOCAD-210ENST00000603844 ABCB6Q9NP58 842 aa7.96□□□□□ -1.14
FOCAD-210ENST00000603844 NPHS2Q9NP85 383 aa7.96□□□□□ -1.14
FOCAD-210ENST00000603844 DISC1Q9NRI5 854 aa7.96□□□□□ -1.14
FOCAD-210ENST00000603844 BRPF3Q9ULD4 1205 aa7.96□□□□□ -1.14
FOCAD-210ENST00000603844 U3KQE9 123 aa7.96□□□□□ -1.14
FOCAD-210ENST00000603844 ZNF608Q9ULD9 1512 aaPredicted RBP7.96□□□□□ -1.14
FOCAD-210ENST00000603844 EIF4G3O43432 1585 aaKnown RBP7.96□□□□□ -1.14
FOCAD-210ENST00000603844 PRXQ9BXM0 1461 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 RAPGEF2Q9Y4G8 1499 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 ERICH3Q5RHP9 1530 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 ZNF862O60290 1169 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 CPNE3O75131 537 aaKnown RBP7.95□□□□□ -1.14
FOCAD-210ENST00000603844 CD96P40200 585 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 AOC3Q16853 763 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 KIF4BQ2VIQ3 1234 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 HRASLS5Q96KN8 279 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 KRT82Q9NSB4 513 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 EGFL7Q9UHF1 273 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 PCDHGC5Q9Y5F6 944 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 CUL7Q14999 1698 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 PBRM1Q86U86 1689 aa7.95□□□□□ -1.14
FOCAD-210ENST00000603844 AQRO60306 1485 aaKnown RBP eCLIP7.94□□□□□ -1.14
FOCAD-210ENST00000603844 CEACAM5P06731 702 aa7.94□□□□□ -1.14
FOCAD-210ENST00000603844 OXCT1P55809 520 aa7.94□□□□□ -1.14
FOCAD-210ENST00000603844 HNRNPUQ00839 825 aaKnown RBP eCLIP7.94□□□□□ -1.14
FOCAD-210ENST00000603844 SLC38A3Q99624 504 aa7.94□□□□□ -1.14
FOCAD-210ENST00000603844 ZC3H12CQ9C0D7 883 aaKnown RBP7.94□□□□□ -1.14
FOCAD-210ENST00000603844 GRIN2BQ13224 1484 aa7.94□□□□□ -1.14
FOCAD-210ENST00000603844 TMEM265A0A087WTH1 108 aa7.93□□□□□ -1.14
FOCAD-210ENST00000603844 TMEM238LA0A1B0GVL6 79 aa7.93□□□□□ -1.14
FOCAD-210ENST00000603844 ICMTO60725 284 aa7.93□□□□□ -1.14
FOCAD-210ENST00000603844 LEFTY1O75610 366 aa7.93□□□□□ -1.14
FOCAD-210ENST00000603844 ORC1Q13415 861 aa7.93□□□□□ -1.14
FOCAD-210ENST00000603844 TTLL4Q14679 1199 aa7.93□□□□□ -1.14
FOCAD-210ENST00000603844 ARHGAP27Q6ZUM4 889 aa7.93□□□□□ -1.14
FOCAD-210ENST00000603844 DUSP23Q9BVJ7 150 aa7.93□□□□□ -1.14
FOCAD-210ENST00000603844 KRTAP4-2Q9BYR5 136 aa7.93□□□□□ -1.14
FOCAD-210ENST00000603844 PCOLCE2Q9UKZ9 415 aa7.93□□□□□ -1.14
FOCAD-210ENST00000603844 PLAGL2Q9UPG8 496 aa7.93□□□□□ -1.14
FOCAD-210ENST00000603844 CARMIL1Q5VZK9 1371 aa7.93□□□□□ -1.14
FOCAD-210ENST00000603844 RNGTTO60942 597 aaKnown RBP7.92□□□□□ -1.14
FOCAD-210ENST00000603844 GSTP1P09211 210 aaKnown RBP7.92□□□□□ -1.14
FOCAD-210ENST00000603844 FAAP100Q0VG06 881 aa7.92□□□□□ -1.14
FOCAD-210ENST00000603844 ANGEL2Q5VTE6 544 aaKnown RBP7.92□□□□□ -1.14
FOCAD-210ENST00000603844 SLC23A3Q6PIS1 610 aa7.92□□□□□ -1.14
FOCAD-210ENST00000603844 ADAMTS12P58397 1594 aa7.92□□□□□ -1.14
FOCAD-210ENST00000603844 ARID3CA6NKF2 412 aa7.91□□□□□ -1.14
FOCAD-210ENST00000603844 HCLS1P14317 486 aaPredicted RBP7.91□□□□□ -1.14
FOCAD-210ENST00000603844 ZNF157P51786 506 aaPredicted RBP7.91□□□□□ -1.14
FOCAD-210ENST00000603844 MESP2Q0VG99 397 aa7.91□□□□□ -1.14
FOCAD-210ENST00000603844 PDE3BQ13370 1112 aa7.91□□□□□ -1.14
FOCAD-210ENST00000603844 ECM1Q16610 540 aa7.91□□□□□ -1.14
FOCAD-210ENST00000603844 FLAD1Q8NFF5 587 aa7.91□□□□□ -1.14
FOCAD-210ENST00000603844 BHLHE22Q8NFJ8 381 aaPredicted RBP7.91□□□□□ -1.14
FOCAD-210ENST00000603844 CCDC74AQ96AQ1 378 aa7.91□□□□□ -1.14
FOCAD-210ENST00000603844 FAM84AQ96KN4 292 aa7.91□□□□□ -1.14
FOCAD-210ENST00000603844 FAM129BQ96TA1 746 aa7.91□□□□□ -1.14
FOCAD-210ENST00000603844 TNIKQ9UKE5 1360 aa7.91□□□□□ -1.14
FOCAD-210ENST00000603844 SNAPC4Q5SXM2 1469 aa7.9□□□□□ -1.14
FOCAD-210ENST00000603844 NDUFB5O43674 189 aa7.9□□□□□ -1.14
FOCAD-210ENST00000603844 KRTAP19-4Q3LI73 84 aa7.9□□□□□ -1.14
FOCAD-210ENST00000603844 DNAJC25Q9H1X3 360 aa7.9□□□□□ -1.14
FOCAD-210ENST00000603844 TNKS2Q9H2K2 1166 aa7.9□□□□□ -1.14
FOCAD-210ENST00000603844 TRAK1Q9UPV9 953 aa7.9□□□□□ -1.14
FOCAD-210ENST00000603844 SNX11Q9Y5W9 270 aa7.9□□□□□ -1.14
FOCAD-210ENST00000603844 FHAD1B1AJZ9 1412 aa7.89□□□□□ -1.15
FOCAD-210ENST00000603844 CEP162Q5TB80 1403 aa7.88□□□□□ -1.15
FOCAD-210ENST00000603844 CARNS1A5YM72 827 aa7.88□□□□□ -1.15
FOCAD-210ENST00000603844 H3BRB1 525 aa7.88□□□□□ -1.15
FOCAD-210ENST00000603844 GADD45BO75293 160 aaPredicted RBP7.88□□□□□ -1.15
FOCAD-210ENST00000603844 NEFMP07197 916 aa7.88□□□□□ -1.15
FOCAD-210ENST00000603844 PDZD3Q86UT5 571 aa7.88□□□□□ -1.15
FOCAD-210ENST00000603844 ZSWIM9Q86XI8 627 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms