RNA–Protein interactions for RNA: ENST00000603844.1

FOCAD-210, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-210ENST00000603844 AEBP2Q6ZN18 517 aaPredicted RBP30.56■■■□□ 2.48
FOCAD-210ENST00000603844 CHIC1Q5VXU3 224 aa28.96■■■□□ 2.23
FOCAD-210ENST00000603844 SENP3Q9H4L4 574 aaPredicted RBP26.12■■□□□ 1.77
FOCAD-210ENST00000603844 PHF23Q9BUL5 403 aaPredicted RBP25.75■■□□□ 1.71
FOCAD-210ENST00000603844 FOXD1Q16676 465 aa24.33■■□□□ 1.49
FOCAD-210ENST00000603844 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
FOCAD-210ENST00000603844 MSH5O43196 834 aa22.83■■□□□ 1.25
FOCAD-210ENST00000603844 PIAS4Q8N2W9 510 aaPredicted RBP22.71■■□□□ 1.23
FOCAD-210ENST00000603844 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
FOCAD-210ENST00000603844 ADRA2BP18089 450 aa22.59■■□□□ 1.21
FOCAD-210ENST00000603844 POTEDQ86YR6 584 aa22.4■■□□□ 1.18
FOCAD-210ENST00000603844 MAPK8IP2Q13387 824 aaPredicted RBP20.77■□□□□ 0.92
FOCAD-210ENST00000603844 SCAF1Q9H7N4 1312 aaKnown RBP20.72■□□□□ 0.91
FOCAD-210ENST00000603844 DMRT2Q9Y5R5 561 aa20.7■□□□□ 0.9
FOCAD-210ENST00000603844 PPP4R3CPQ6ZMV5 832 aa20.23■□□□□ 0.83
FOCAD-210ENST00000603844 HOXD11P31277 338 aaPredicted RBP19.91■□□□□ 0.78
FOCAD-210ENST00000603844 CNKSR2Q8WXI2 1034 aa19.89■□□□□ 0.77
FOCAD-210ENST00000603844 DCAF8L1A6NGE4 600 aa19.81■□□□□ 0.76
FOCAD-210ENST00000603844 RNF216Q9NWF9 866 aaPredicted RBP19.73■□□□□ 0.75
FOCAD-210ENST00000603844 CACNB1Q02641 598 aaPredicted RBP19.62■□□□□ 0.73
FOCAD-210ENST00000603844 RNF39Q9H2S5 420 aa19.46■□□□□ 0.71
FOCAD-210ENST00000603844 NCBP3Q53F19 620 aaKnown RBP19.45■□□□□ 0.7
FOCAD-210ENST00000603844 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
FOCAD-210ENST00000603844 C1QBPQ07021 282 aaKnown RBP19.19■□□□□ 0.66
FOCAD-210ENST00000603844 NPM3O75607 178 aaKnown RBP19.15■□□□□ 0.66
FOCAD-210ENST00000603844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.94■□□□□ 0.62
FOCAD-210ENST00000603844 KCNA4P22459 653 aa18.69■□□□□ 0.58
FOCAD-210ENST00000603844 U3KPZ7 1027 aaPredicted RBP18.54■□□□□ 0.56
FOCAD-210ENST00000603844 SLC4A2P04920 1241 aa18.31■□□□□ 0.52
FOCAD-210ENST00000603844 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
FOCAD-210ENST00000603844 CAPN15O75808 1086 aa18.26■□□□□ 0.51
FOCAD-210ENST00000603844 DSG3P32926 999 aa18.19■□□□□ 0.5
FOCAD-210ENST00000603844 APLP2Q06481 763 aa18.05■□□□□ 0.48
FOCAD-210ENST00000603844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.01■□□□□ 0.47
FOCAD-210ENST00000603844 HNRNPUL2Q1KMD3 747 aaKnown RBP18.01■□□□□ 0.47
FOCAD-210ENST00000603844 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
FOCAD-210ENST00000603844 ZNF219Q9P2Y4 722 aaPredicted RBP17.94■□□□□ 0.46
FOCAD-210ENST00000603844 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.45
FOCAD-210ENST00000603844 ABCB7O75027 752 aa17.81■□□□□ 0.44
FOCAD-210ENST00000603844 MYCNP04198 464 aaPredicted RBP17.73■□□□□ 0.43
FOCAD-210ENST00000603844 SLC4A1APQ9BWU0 796 aaKnown RBP17.64■□□□□ 0.41
FOCAD-210ENST00000603844 POTEHQ6S545 545 aa17.54■□□□□ 0.4
FOCAD-210ENST00000603844 FOXD4L1Q9NU39 408 aa17.49■□□□□ 0.39
FOCAD-210ENST00000603844 POLA2Q14181 598 aa17.45■□□□□ 0.38
FOCAD-210ENST00000603844 RBM42Q9BTD8 480 aaKnown RBP17.38■□□□□ 0.37
FOCAD-210ENST00000603844 ATF5Q9Y2D1 282 aaPredicted RBP17.29■□□□□ 0.36
FOCAD-210ENST00000603844 ZBTB22O15209 634 aa17.17■□□□□ 0.34
FOCAD-210ENST00000603844 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
FOCAD-210ENST00000603844 CHRDL2Q6WN34 429 aa17.01■□□□□ 0.31
FOCAD-210ENST00000603844 ATXN8OSP0DMR3 200 aa16.99■□□□□ 0.31
FOCAD-210ENST00000603844 AKT1S1Q96B36 256 aa16.96■□□□□ 0.31
FOCAD-210ENST00000603844 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
FOCAD-210ENST00000603844 REM2Q8IYK8 340 aaPredicted RBP16.79■□□□□ 0.28
FOCAD-210ENST00000603844 FBLN2P98095 1184 aa16.65■□□□□ 0.26
FOCAD-210ENST00000603844 PITPNM1O00562 1244 aa16.6■□□□□ 0.25
FOCAD-210ENST00000603844 SPDYE2BA6NHP3 402 aa16.58■□□□□ 0.24
FOCAD-210ENST00000603844 SPDYE6P0CI01 402 aa16.58■□□□□ 0.24
FOCAD-210ENST00000603844 SPDYE2Q495Y8 402 aa16.58■□□□□ 0.24
FOCAD-210ENST00000603844 PIP4P2Q8N4L2 257 aa16.58■□□□□ 0.24
FOCAD-210ENST00000603844 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
FOCAD-210ENST00000603844 FXR2P51116 673 aaKnown RBP eCLIP16.49■□□□□ 0.23
FOCAD-210ENST00000603844 SP7Q8TDD2 431 aaPredicted RBP16.41■□□□□ 0.22
FOCAD-210ENST00000603844 ZNF692Q9BU19 519 aaPredicted RBP16.35■□□□□ 0.21
FOCAD-210ENST00000603844 SSUH2Q9Y2M2 353 aa16.35■□□□□ 0.21
FOCAD-210ENST00000603844 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
FOCAD-210ENST00000603844 SPDYE1Q8NFV5 336 aaPredicted RBP16.31■□□□□ 0.2
FOCAD-210ENST00000603844 HAX1O00165 279 aa16.3■□□□□ 0.2
FOCAD-210ENST00000603844 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
FOCAD-210ENST00000603844 PRKAR2AP13861 404 aaKnown RBP16.17■□□□□ 0.18
FOCAD-210ENST00000603844 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
FOCAD-210ENST00000603844 EVX2Q03828 476 aa16.08■□□□□ 0.16
FOCAD-210ENST00000603844 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
FOCAD-210ENST00000603844 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
FOCAD-210ENST00000603844 C19orf67A6NJJ6 358 aa15.97■□□□□ 0.15
FOCAD-210ENST00000603844 CHADLQ6NUI6 762 aa15.95■□□□□ 0.14
FOCAD-210ENST00000603844 GABBR2O75899 941 aa15.74■□□□□ 0.11
FOCAD-210ENST00000603844 FARP1Q9Y4F1 1045 aaPredicted RBP15.73■□□□□ 0.11
FOCAD-210ENST00000603844 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
FOCAD-210ENST00000603844 STAG3Q9UJ98 1225 aa15.68■□□□□ 0.1
FOCAD-210ENST00000603844 CD44P16070 742 aaKnown RBP15.65■□□□□ 0.1
FOCAD-210ENST00000603844 CREBZFQ9NS37 354 aa15.58■□□□□ 0.08
FOCAD-210ENST00000603844 CLCN6P51797 869 aa15.51■□□□□ 0.07
FOCAD-210ENST00000603844 ZNF579Q8NAF0 562 aaKnown RBP15.43■□□□□ 0.06
FOCAD-210ENST00000603844 ZRANB1Q9UGI0 708 aa15.41■□□□□ 0.06
FOCAD-210ENST00000603844 POTEIP0CG38 1075 aa15.4■□□□□ 0.06
FOCAD-210ENST00000603844 LHX8Q68G74 356 aa15.39■□□□□ 0.05
FOCAD-210ENST00000603844 PROM2Q8N271 834 aa15.32■□□□□ 0.04
FOCAD-210ENST00000603844 NPM1P06748 294 aaKnown RBP eCLIP15.31■□□□□ 0.04
FOCAD-210ENST00000603844 MNX1P50219 401 aaPredicted RBP15.3■□□□□ 0.04
FOCAD-210ENST00000603844 DCBLD2Q96PD2 775 aa15.3■□□□□ 0.04
FOCAD-210ENST00000603844 PAK3O75914 559 aaPredicted RBP15.29■□□□□ 0.04
FOCAD-210ENST00000603844 GALR2O43603 387 aaPredicted RBP15.22■□□□□ 0.03
FOCAD-210ENST00000603844 PHF12Q96QT6 1004 aa15.19■□□□□ 0.02
FOCAD-210ENST00000603844 TSPYL2Q9H2G4 693 aaPredicted RBP15□□□□□ -0.01
FOCAD-210ENST00000603844 MS4A3Q96HJ5 214 aa14.99□□□□□ -0.01
FOCAD-210ENST00000603844 PLEKHG5O94827 1062 aa14.98□□□□□ -0.01
FOCAD-210ENST00000603844 MIER1Q8N108 512 aa14.97□□□□□ -0.01
FOCAD-210ENST00000603844 CCDC61Q9Y6R9 512 aa14.95□□□□□ -0.02
FOCAD-210ENST00000603844 PELP1Q8IZL8 1130 aaKnown RBP14.93□□□□□ -0.02
FOCAD-210ENST00000603844 ASTLQ6HA08 431 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms