RNA–Protein interactions for RNA: ENST00000602204.1

SIN3B-212, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-212ENST00000602204 CTR9Q6PD62 1173 aa23.4■■□□□ 1.34
SIN3B-212ENST00000602204 RALYLQ86SE5 291 aaKnown RBP23.4■■□□□ 1.34
SIN3B-212ENST00000602204 TBC1D10CQ8IV04 446 aa23.4■■□□□ 1.34
SIN3B-212ENST00000602204 AMOTL1Q8IY63 956 aa23.4■■□□□ 1.34
SIN3B-212ENST00000602204 FBXL16Q8N461 479 aa23.4■■□□□ 1.34
SIN3B-212ENST00000602204 ROBO3Q96MS0 1386 aa23.4■■□□□ 1.34
SIN3B-212ENST00000602204 NPM3O75607 178 aaKnown RBP23.39■■□□□ 1.33
SIN3B-212ENST00000602204 LMNB1P20700 586 aa23.39■■□□□ 1.33
SIN3B-212ENST00000602204 APOBEC3HQ6NTF7 200 aaKnown RBP23.39■■□□□ 1.33
SIN3B-212ENST00000602204 MB21D2Q8IYB1 491 aaPredicted RBP23.39■■□□□ 1.33
SIN3B-212ENST00000602204 KRT23Q9C075 422 aa23.39■■□□□ 1.33
SIN3B-212ENST00000602204 SOCS7O14512 581 aa23.38■■□□□ 1.33
SIN3B-212ENST00000602204 SLC3A2P08195 630 aaKnown RBP23.38■■□□□ 1.33
SIN3B-212ENST00000602204 FGRP09769 529 aa23.38■■□□□ 1.33
SIN3B-212ENST00000602204 AK2P54819 239 aa23.38■■□□□ 1.33
SIN3B-212ENST00000602204 EIF6P56537 245 aaKnown RBP23.38■■□□□ 1.33
SIN3B-212ENST00000602204 EXOSC10Q01780 885 aaKnown RBP23.38■■□□□ 1.33
SIN3B-212ENST00000602204 MFSD6Q6ZSS7 791 aa23.38■■□□□ 1.33
SIN3B-212ENST00000602204 ARHGAP27Q6ZUM4 889 aa23.38■■□□□ 1.33
SIN3B-212ENST00000602204 TGFBRAP1Q8WUH2 860 aa23.38■■□□□ 1.33
SIN3B-212ENST00000602204 FLT1P17948 1338 aa23.37■■□□□ 1.33
SIN3B-212ENST00000602204 USP17L12C9JPN9 530 aa23.37■■□□□ 1.33
SIN3B-212ENST00000602204 USP17L21D6R901 530 aa23.37■■□□□ 1.33
SIN3B-212ENST00000602204 CPA1P15085 419 aa23.37■■□□□ 1.33
SIN3B-212ENST00000602204 MCM5P33992 734 aa23.37■■□□□ 1.33
SIN3B-212ENST00000602204 PRELPP51888 382 aa23.37■■□□□ 1.33
SIN3B-212ENST00000602204 OGFOD1Q8N543 542 aa23.37■■□□□ 1.33
SIN3B-212ENST00000602204 MTMR14Q8NCE2 650 aa23.37■■□□□ 1.33
SIN3B-212ENST00000602204 ZSCAN31Q96LW9 406 aaPredicted RBP23.37■■□□□ 1.33
SIN3B-212ENST00000602204 MTA3Q9BTC8 594 aa23.37■■□□□ 1.33
SIN3B-212ENST00000602204 AGXT2Q9BYV1 514 aa23.37■■□□□ 1.33
SIN3B-212ENST00000602204 MCM9Q9NXL9 1143 aa23.37■■□□□ 1.33
SIN3B-212ENST00000602204 LIMCH1Q9UPQ0 1083 aa23.37■■□□□ 1.33
SIN3B-212ENST00000602204 MINDY4BA8MYZ0 360 aa23.36■■□□□ 1.33
SIN3B-212ENST00000602204 C12orf60Q5U649 245 aa23.36■■□□□ 1.33
SIN3B-212ENST00000602204 CDC42EP5Q6NZY7 148 aa23.36■■□□□ 1.33
SIN3B-212ENST00000602204 USP40Q9NVE5 1235 aa23.36■■□□□ 1.33
SIN3B-212ENST00000602204 TAOK2Q9UL54 1235 aa23.36■■□□□ 1.33
SIN3B-212ENST00000602204 COL2A1P02458 1487 aaPredicted RBP23.36■■□□□ 1.33
SIN3B-212ENST00000602204 WDHD1O75717 1129 aaPredicted RBP23.35■■□□□ 1.33
SIN3B-212ENST00000602204 USP17L8P0C7I0 530 aa23.35■■□□□ 1.33
SIN3B-212ENST00000602204 CTDSPL2Q05D32 466 aa23.35■■□□□ 1.33
SIN3B-212ENST00000602204 CFAP100Q494V2 611 aa23.35■■□□□ 1.33
SIN3B-212ENST00000602204 IDI2Q9BXS1 227 aa23.35■■□□□ 1.33
SIN3B-212ENST00000602204 SH2B1Q9NRF2 756 aaPredicted RBP23.35■■□□□ 1.33
SIN3B-212ENST00000602204 ORC4O43929 436 aa23.34■■□□□ 1.33
SIN3B-212ENST00000602204 MAPKAPK5Q8IW41 473 aa23.34■■□□□ 1.33
SIN3B-212ENST00000602204 DPF2Q92785 391 aa23.34■■□□□ 1.33
SIN3B-212ENST00000602204 TMX3Q96JJ7 454 aa23.34■■□□□ 1.33
SIN3B-212ENST00000602204 NEDD4P46934 1319 aa23.33■■□□□ 1.33
SIN3B-212ENST00000602204 SIPA1L1O43166 1804 aa23.33■■□□□ 1.33
SIN3B-212ENST00000602204 SLC4A3P48751 1232 aa23.33■■□□□ 1.33
SIN3B-212ENST00000602204 RBM5P52756 815 aaKnown RBP eCLIP23.33■■□□□ 1.33
SIN3B-212ENST00000602204 CUL4AQ13619 759 aa23.33■■□□□ 1.33
SIN3B-212ENST00000602204 TOB2Q14106 344 aaPredicted RBP23.33■■□□□ 1.33
SIN3B-212ENST00000602204 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.33■■□□□ 1.33
SIN3B-212ENST00000602204 YBX3P16989 372 aaKnown RBP eCLIP23.32■■□□□ 1.32
SIN3B-212ENST00000602204 ZNF280AP59817 542 aaPredicted RBP23.32■■□□□ 1.32
SIN3B-212ENST00000602204 PDE4BQ07343 736 aa23.32■■□□□ 1.32
SIN3B-212ENST00000602204 COL9A3Q14050 684 aaPredicted RBP23.32■■□□□ 1.32
SIN3B-212ENST00000602204 Q6ZUG5 572 aa23.32■■□□□ 1.32
SIN3B-212ENST00000602204 TMEM87BQ96K49 555 aa23.32■■□□□ 1.32
SIN3B-212ENST00000602204 SPDYE2BA6NHP3 402 aa23.31■■□□□ 1.32
SIN3B-212ENST00000602204 B4E1Z4 1266 aa23.31■■□□□ 1.32
SIN3B-212ENST00000602204 PRC1O43663 620 aa23.31■■□□□ 1.32
SIN3B-212ENST00000602204 POLR3DP05423 398 aaPredicted RBP23.31■■□□□ 1.32
SIN3B-212ENST00000602204 SPDYE6P0CI01 402 aa23.31■■□□□ 1.32
SIN3B-212ENST00000602204 ANTXR2P58335 489 aa23.31■■□□□ 1.32
SIN3B-212ENST00000602204 DLGAP5Q15398 846 aa23.31■■□□□ 1.32
SIN3B-212ENST00000602204 ESR2Q92731 530 aa23.31■■□□□ 1.32
SIN3B-212ENST00000602204 INTS4Q96HW7 963 aaKnown RBP23.31■■□□□ 1.32
SIN3B-212ENST00000602204 ZBED3Q96IU2 234 aaPredicted RBP23.31■■□□□ 1.32
SIN3B-212ENST00000602204 ZNF287Q9HBT7 754 aa23.31■■□□□ 1.32
SIN3B-212ENST00000602204 ZBTB12Q9Y330 459 aaPredicted RBP23.31■■□□□ 1.32
SIN3B-212ENST00000602204 TACC3Q9Y6A5 838 aa23.31■■□□□ 1.32
SIN3B-212ENST00000602204 CYP2D7A0A087X1C5 515 aa23.3■■□□□ 1.32
SIN3B-212ENST00000602204 EVCP57679 992 aa23.3■■□□□ 1.32
SIN3B-212ENST00000602204 FGD1P98174 961 aa23.3■■□□□ 1.32
SIN3B-212ENST00000602204 FKBP1CQ5VVH2 108 aa23.3■■□□□ 1.32
SIN3B-212ENST00000602204 TTC6Q86TZ1 520 aa23.3■■□□□ 1.32
SIN3B-212ENST00000602204 OSBPL5Q9H0X9 879 aaPredicted RBP23.3■■□□□ 1.32
SIN3B-212ENST00000602204 TMOD2Q9NZR1 351 aa23.3■■□□□ 1.32
SIN3B-212ENST00000602204 ENTPD3O75355 529 aa23.29■■□□□ 1.32
SIN3B-212ENST00000602204 HSP90AA1P07900 732 aaKnown RBP23.29■■□□□ 1.32
SIN3B-212ENST00000602204 CYP2D6P10635 497 aa23.29■■□□□ 1.32
SIN3B-212ENST00000602204 TCEANC2Q96MN5 208 aa23.29■■□□□ 1.32
SIN3B-212ENST00000602204 DHX36Q9H2U1 1008 aaKnown RBP23.29■■□□□ 1.32
SIN3B-212ENST00000602204 KDM4AO75164 1064 aa23.28■■□□□ 1.32
SIN3B-212ENST00000602204 SART3Q15020 963 aaKnown RBP23.28■■□□□ 1.32
SIN3B-212ENST00000602204 CYB5R4Q7L1T6 521 aa23.28■■□□□ 1.32
SIN3B-212ENST00000602204 PRMT6Q96LA8 375 aaPredicted RBP23.28■■□□□ 1.32
SIN3B-212ENST00000602204 DDX4Q9NQI0 724 aaKnown RBP23.28■■□□□ 1.32
SIN3B-212ENST00000602204 ZSWIM5Q9P217 1185 aa23.28■■□□□ 1.32
SIN3B-212ENST00000602204 ZNF541Q9H0D2 1346 aa23.28■■□□□ 1.32
SIN3B-212ENST00000602204 ATRNL1Q5VV63 1379 aa23.27■■□□□ 1.32
SIN3B-212ENST00000602204 GREB1LQ9C091 1923 aaPredicted RBP23.27■■□□□ 1.32
SIN3B-212ENST00000602204 LIFRP42702 1097 aa23.27■■□□□ 1.32
SIN3B-212ENST00000602204 SPDYE2Q495Y8 402 aa23.27■■□□□ 1.32
SIN3B-212ENST00000602204 C16orf86Q6ZW13 317 aa23.27■■□□□ 1.32
SIN3B-212ENST00000602204 GPC2Q8N158 579 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms