RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 MINDY4BA8MYZ0 360 aa29.41■■■□□ 2.3
RFX1-205ENST00000589239 SMIM22K7EJ46 135 aa29.41■■■□□ 2.3
RFX1-205ENST00000589239 NFIAQ12857 509 aa29.41■■■□□ 2.3
RFX1-205ENST00000589239 SLC4A8Q2Y0W8 1093 aa29.41■■■□□ 2.3
RFX1-205ENST00000589239 DDX4Q9NQI0 724 aaKnown RBP29.41■■■□□ 2.3
RFX1-205ENST00000589239 CDK5RAP2Q96SN8 1893 aa29.41■■■□□ 2.3
RFX1-205ENST00000589239 RBM26Q5T8P6 1007 aaKnown RBP29.41■■■□□ 2.3
RFX1-205ENST00000589239 STOX1Q6ZVD7 989 aa29.41■■■□□ 2.3
RFX1-205ENST00000589239 MTMR14Q8NCE2 650 aa29.41■■■□□ 2.3
RFX1-205ENST00000589239 EVX2Q03828 476 aa29.4■■■□□ 2.3
RFX1-205ENST00000589239 JAKMIP1Q96N16 626 aaKnown RBP29.4■■■□□ 2.3
RFX1-205ENST00000589239 CTDSPL2Q05D32 466 aa29.39■■■□□ 2.3
RFX1-205ENST00000589239 SAMD7Q7Z3H4 446 aa29.39■■■□□ 2.3
RFX1-205ENST00000589239 SAP30BPQ9UHR5 308 aaKnown RBP29.39■■■□□ 2.3
RFX1-205ENST00000589239 WNT10BO00744 389 aa29.39■■■□□ 2.3
RFX1-205ENST00000589239 MMP14P50281 582 aa29.39■■■□□ 2.3
RFX1-205ENST00000589239 PPARAQ07869 468 aa29.39■■■□□ 2.3
RFX1-205ENST00000589239 COL9A3Q14050 684 aaPredicted RBP29.39■■■□□ 2.3
RFX1-205ENST00000589239 NBPF9Q3BBW0 867 aa29.39■■■□□ 2.3
RFX1-205ENST00000589239 TBC1D10CQ8IV04 446 aa29.39■■■□□ 2.3
RFX1-205ENST00000589239 ZBED3Q96IU2 234 aaPredicted RBP29.39■■■□□ 2.3
RFX1-205ENST00000589239 UPF3BQ9BZI7 483 aaKnown RBP29.39■■■□□ 2.3
RFX1-205ENST00000589239 GPRC5DQ9NZD1 345 aa29.39■■■□□ 2.3
RFX1-205ENST00000589239 ARPP21Q9UBL0 812 aaPredicted RBP29.39■■■□□ 2.3
RFX1-205ENST00000589239 CLRN2A0PK11 232 aa29.38■■■□□ 2.29
RFX1-205ENST00000589239 E7EWF7 191 aa29.38■■■□□ 2.29
RFX1-205ENST00000589239 CYP2D6P10635 497 aa29.38■■■□□ 2.29
RFX1-205ENST00000589239 STK11IPQ8N1F8 1099 aa29.38■■■□□ 2.29
RFX1-205ENST00000589239 RABEP1Q15276 862 aa29.38■■■□□ 2.29
RFX1-205ENST00000589239 CASTP20810 708 aaKnown RBP29.37■■■□□ 2.29
RFX1-205ENST00000589239 KRT32Q14532 448 aa29.37■■■□□ 2.29
RFX1-205ENST00000589239 TBC1D10BQ4KMP7 808 aaPredicted RBP29.37■■■□□ 2.29
RFX1-205ENST00000589239 H7C1D1 291 aa29.36■■■□□ 2.29
RFX1-205ENST00000589239 CPA1P15085 419 aa29.36■■■□□ 2.29
RFX1-205ENST00000589239 IDI2Q9BXS1 227 aa29.36■■■□□ 2.29
RFX1-205ENST00000589239 NAV1Q8NEY1 1877 aa29.36■■■□□ 2.29
RFX1-205ENST00000589239 SBK1Q52WX2 424 aa29.36■■■□□ 2.29
RFX1-205ENST00000589239 INCENPQ9NQS7 918 aa29.36■■■□□ 2.29
RFX1-205ENST00000589239 FAM198AQ9UFP1 575 aa29.36■■■□□ 2.29
RFX1-205ENST00000589239 LAMA4Q16363 1823 aa29.36■■■□□ 2.29
RFX1-205ENST00000589239 FOCADQ5VW36 1801 aa29.36■■■□□ 2.29
RFX1-205ENST00000589239 ECM29Q5VYK3 1845 aa29.36■■■□□ 2.29
RFX1-205ENST00000589239 EPS15P42566 896 aa29.35■■■□□ 2.29
RFX1-205ENST00000589239 TCP10Q12799 353 aa29.35■■■□□ 2.29
RFX1-205ENST00000589239 DPY19L2Q6NUT2 758 aa29.35■■■□□ 2.29
RFX1-205ENST00000589239 NEK1Q96PY6 1258 aa29.35■■■□□ 2.29
RFX1-205ENST00000589239 ZNF70Q9UC06 446 aaPredicted RBP29.35■■■□□ 2.29
RFX1-205ENST00000589239 ANAPC4Q9UJX5 808 aa29.35■■■□□ 2.29
RFX1-205ENST00000589239 ZC3H4Q9UPT8 1303 aaKnown RBP29.35■■■□□ 2.29
RFX1-205ENST00000589239 POLR3DP05423 398 aaPredicted RBP29.35■■■□□ 2.29
RFX1-205ENST00000589239 SPDYE2Q495Y8 402 aa29.35■■■□□ 2.29
RFX1-205ENST00000589239 C12orf60Q5U649 245 aa29.35■■■□□ 2.29
RFX1-205ENST00000589239 ZFPM1Q8IX07 1006 aa29.35■■■□□ 2.29
RFX1-205ENST00000589239 OSBPL5Q9H0X9 879 aaPredicted RBP29.35■■■□□ 2.29
RFX1-205ENST00000589239 TACC3Q9Y6A5 838 aa29.35■■■□□ 2.29
RFX1-205ENST00000589239 PLCD1P51178 756 aa29.34■■■□□ 2.29
RFX1-205ENST00000589239 NEK4P51957 841 aa29.34■■■□□ 2.29
RFX1-205ENST00000589239 TM6SF1Q9BZW5 370 aa29.34■■■□□ 2.29
RFX1-205ENST00000589239 MYO1BO43795 1136 aa29.33■■■□□ 2.29
RFX1-205ENST00000589239 PSMA5P28066 241 aa29.33■■■□□ 2.29
RFX1-205ENST00000589239 KIF4BQ2VIQ3 1234 aa29.33■■■□□ 2.29
RFX1-205ENST00000589239 VEZTQ9HBM0 779 aa29.33■■■□□ 2.29
RFX1-205ENST00000589239 ZSWIM6Q9HCJ5 1215 aa29.33■■■□□ 2.29
RFX1-205ENST00000589239 TMOD2Q9NZR1 351 aa29.33■■■□□ 2.29
RFX1-205ENST00000589239 AKNAD1Q5T1N1 836 aa29.33■■■□□ 2.29
RFX1-205ENST00000589239 AMOTL1Q8IY63 956 aa29.33■■■□□ 2.29
RFX1-205ENST00000589239 DDX60LQ5H9U9 1706 aaKnown RBP29.33■■■□□ 2.29
RFX1-205ENST00000589239 TRPM4Q8TD43 1214 aa29.32■■■□□ 2.28
RFX1-205ENST00000589239 NEDD4P46934 1319 aa29.32■■■□□ 2.28
RFX1-205ENST00000589239 TCP10L2B9ZVM9 353 aa29.32■■■□□ 2.28
RFX1-205ENST00000589239 BLOC1S2Q6QNY1 142 aa29.31■■■□□ 2.28
RFX1-205ENST00000589239 MFSD6Q6ZSS7 791 aa29.31■■■□□ 2.28
RFX1-205ENST00000589239 STAG1Q8WVM7 1258 aa29.31■■■□□ 2.28
RFX1-205ENST00000589239 LMOD1P29536 600 aaPredicted RBP29.3■■■□□ 2.28
RFX1-205ENST00000589239 RUFY3Q7L099 469 aa29.3■■■□□ 2.28
RFX1-205ENST00000589239 NKX2-3Q8TAU0 364 aa29.3■■■□□ 2.28
RFX1-205ENST00000589239 CYP46A1Q9Y6A2 500 aa29.3■■■□□ 2.28
RFX1-205ENST00000589239 ASTN2O75129 1339 aaPredicted RBP29.3■■■□□ 2.28
RFX1-205ENST00000589239 LAMB1P07942 1786 aa29.3■■■□□ 2.28
RFX1-205ENST00000589239 GLTPD2A6NH11 291 aa29.3■■■□□ 2.28
RFX1-205ENST00000589239 NPM3O75607 178 aaKnown RBP29.3■■■□□ 2.28
RFX1-205ENST00000589239 MYH1P12882 1939 aa29.3■■■□□ 2.28
RFX1-205ENST00000589239 CD2BP2O95400 341 aaKnown RBP29.29■■■□□ 2.28
RFX1-205ENST00000589239 NCOA7Q8NI08 942 aa29.29■■■□□ 2.28
RFX1-205ENST00000589239 DYNLL2Q96FJ2 89 aa29.29■■■□□ 2.28
RFX1-205ENST00000589239 TCEANC2Q96MN5 208 aa29.29■■■□□ 2.28
RFX1-205ENST00000589239 DCAF8L1A6NGE4 600 aa29.29■■■□□ 2.28
RFX1-205ENST00000589239 TRDNQ13061 729 aa29.29■■■□□ 2.28
RFX1-205ENST00000589239 SCAF8Q9UPN6 1271 aaKnown RBP29.29■■■□□ 2.28
RFX1-205ENST00000589239 RPS6KB1P23443 525 aa29.28■■■□□ 2.28
RFX1-205ENST00000589239 RALYLQ86SE5 291 aaKnown RBP29.28■■■□□ 2.28
RFX1-205ENST00000589239 RNF41Q9H4P4 317 aaPredicted RBP29.28■■■□□ 2.28
RFX1-205ENST00000589239 TOMM22Q9NS69 142 aa29.28■■■□□ 2.28
RFX1-205ENST00000589239 B4E1Z4 1266 aa29.27■■■□□ 2.28
RFX1-205ENST00000589239 ENTPD3O75355 529 aa29.27■■■□□ 2.28
RFX1-205ENST00000589239 PRDM1O75626 825 aa29.27■■■□□ 2.28
RFX1-205ENST00000589239 RRP12Q5JTH9 1297 aaKnown RBP29.27■■■□□ 2.28
RFX1-205ENST00000589239 SH3BP5LQ7L8J4 393 aa29.27■■■□□ 2.28
RFX1-205ENST00000589239 L3MBTL3Q96JM7 780 aaPredicted RBP29.27■■■□□ 2.28
RFX1-205ENST00000589239 DDTLA6NHG4 134 aaPredicted RBP29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms