RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 FGAP02671 866 aa15.37■□□□□ 0.05
TRIM47-202ENST00000585333 CHGBP05060 677 aa15.37■□□□□ 0.05
TRIM47-202ENST00000585333 POLR3DP05423 398 aaPredicted RBP15.37■□□□□ 0.05
TRIM47-202ENST00000585333 HMGB1P09429 215 aaKnown RBP15.37■□□□□ 0.05
TRIM47-202ENST00000585333 VEGFAP15692 232 aaPredicted RBP15.37■□□□□ 0.05
TRIM47-202ENST00000585333 PSMA5P28066 241 aa15.37■□□□□ 0.05
TRIM47-202ENST00000585333 EPHX2P34913 555 aa15.37■□□□□ 0.05
TRIM47-202ENST00000585333 RBM25P49756 843 aaKnown RBP15.37■□□□□ 0.05
TRIM47-202ENST00000585333 TRDNQ13061 729 aa15.37■□□□□ 0.05
TRIM47-202ENST00000585333 SLFNL1Q499Z3 407 aa15.37■□□□□ 0.05
TRIM47-202ENST00000585333 TBC1D10BQ4KMP7 808 aaPredicted RBP15.37■□□□□ 0.05
TRIM47-202ENST00000585333 ZNF784Q8NCA9 323 aaPredicted RBP15.37■□□□□ 0.05
TRIM47-202ENST00000585333 TRIM34Q9BYJ4 488 aa15.37■□□□□ 0.05
TRIM47-202ENST00000585333 TDRD3Q9H7E2 651 aaKnown RBP15.37■□□□□ 0.05
TRIM47-202ENST00000585333 CNNM2Q9H8M5 875 aa15.37■□□□□ 0.05
TRIM47-202ENST00000585333 WDHD1O75717 1129 aaPredicted RBP15.36■□□□□ 0.05
TRIM47-202ENST00000585333 PTH1RQ03431 593 aa15.36■□□□□ 0.05
TRIM47-202ENST00000585333 PDE4BQ07343 736 aa15.36■□□□□ 0.05
TRIM47-202ENST00000585333 NECTIN1Q15223 517 aa15.36■□□□□ 0.05
TRIM47-202ENST00000585333 TSGA10IPQ3SY00 556 aa15.36■□□□□ 0.05
TRIM47-202ENST00000585333 SDR42E1Q8WUS8 393 aa15.36■□□□□ 0.05
TRIM47-202ENST00000585333 FAM151AQ8WW52 585 aa15.36■□□□□ 0.05
TRIM47-202ENST00000585333 DCPSQ96C86 337 aaKnown RBP15.36■□□□□ 0.05
TRIM47-202ENST00000585333 OSBPL5Q9H0X9 879 aaPredicted RBP15.36■□□□□ 0.05
TRIM47-202ENST00000585333 VEZTQ9HBM0 779 aa15.36■□□□□ 0.05
TRIM47-202ENST00000585333 ANAPC4Q9UJX5 808 aa15.36■□□□□ 0.05
TRIM47-202ENST00000585333 ECM29Q5VYK3 1845 aa15.36■□□□□ 0.05
TRIM47-202ENST00000585333 EPS15P42566 896 aa15.35■□□□□ 0.05
TRIM47-202ENST00000585333 PICALMQ13492 652 aa15.35■□□□□ 0.05
TRIM47-202ENST00000585333 RBM26Q5T8P6 1007 aaKnown RBP15.35■□□□□ 0.05
TRIM47-202ENST00000585333 VPS53Q5VIR6 699 aa15.35■□□□□ 0.05
TRIM47-202ENST00000585333 CREB3L3Q68CJ9 461 aa15.35■□□□□ 0.05
TRIM47-202ENST00000585333 SAMD7Q7Z3H4 446 aa15.35■□□□□ 0.05
TRIM47-202ENST00000585333 MAPKAPK5Q8IW41 473 aa15.35■□□□□ 0.05
TRIM47-202ENST00000585333 ZSCAN29Q8IWY8 852 aaPredicted RBP15.35■□□□□ 0.05
TRIM47-202ENST00000585333 TBC1D32Q96NH3 1257 aa15.35■□□□□ 0.05
TRIM47-202ENST00000585333 EHD4Q9H223 541 aa15.35■□□□□ 0.05
TRIM47-202ENST00000585333 IL25Q9H293 177 aa15.35■□□□□ 0.05
TRIM47-202ENST00000585333 PI4KBQ9UBF8 816 aa15.35■□□□□ 0.05
TRIM47-202ENST00000585333 SWAP70Q9UH65 585 aa15.35■□□□□ 0.05
TRIM47-202ENST00000585333 MKRN1Q9UHC7 482 aaKnown RBP15.35■□□□□ 0.05
TRIM47-202ENST00000585333 ATRNL1Q5VV63 1379 aa15.35■□□□□ 0.05
TRIM47-202ENST00000585333 USP17L12C9JPN9 530 aa15.34■□□□□ 0.05
TRIM47-202ENST00000585333 USP17L21D6R901 530 aa15.34■□□□□ 0.05
TRIM47-202ENST00000585333 PRKAB2O43741 272 aa15.34■□□□□ 0.05
TRIM47-202ENST00000585333 PPARAQ07869 468 aa15.34■□□□□ 0.05
TRIM47-202ENST00000585333 RALYLQ86SE5 291 aaKnown RBP15.34■□□□□ 0.05
TRIM47-202ENST00000585333 FOXP4Q8IVH2 680 aaPredicted RBP15.34■□□□□ 0.05
TRIM47-202ENST00000585333 SULF1Q8IWU6 871 aa15.34■□□□□ 0.05
TRIM47-202ENST00000585333 KCNB2Q92953 911 aa15.34■□□□□ 0.05
TRIM47-202ENST00000585333 KRT23Q9C075 422 aa15.34■□□□□ 0.05
TRIM47-202ENST00000585333 TAF1DQ9H5J8 278 aaPredicted RBP15.34■□□□□ 0.05
TRIM47-202ENST00000585333 EPB41L4AQ9HCS5 686 aaPredicted RBP15.34■□□□□ 0.05
TRIM47-202ENST00000585333 ROBO3Q96MS0 1386 aa15.34■□□□□ 0.05
TRIM47-202ENST00000585333 FOCADQ5VW36 1801 aa15.33■□□□□ 0.05
TRIM47-202ENST00000585333 NAV1Q8NEY1 1877 aa15.33■□□□□ 0.05
TRIM47-202ENST00000585333 CLRN2A0PK11 232 aa15.33■□□□□ 0.04
TRIM47-202ENST00000585333 MINDY4BA8MYZ0 360 aa15.33■□□□□ 0.04
TRIM47-202ENST00000585333 SLC27A2O14975 620 aa15.33■□□□□ 0.04
TRIM47-202ENST00000585333 NBPF9Q3BBW0 867 aa15.33■□□□□ 0.04
TRIM47-202ENST00000585333 PPP4R3BQ5MIZ7 849 aa15.33■□□□□ 0.04
TRIM47-202ENST00000585333 C12orf60Q5U649 245 aa15.33■□□□□ 0.04
TRIM47-202ENST00000585333 CTR9Q6PD62 1173 aa15.33■□□□□ 0.04
TRIM47-202ENST00000585333 MFSD6Q6ZSS7 791 aa15.33■□□□□ 0.04
TRIM47-202ENST00000585333 IL17RAQ96F46 866 aa15.33■□□□□ 0.04
TRIM47-202ENST00000585333 TM6SF1Q9BZW5 370 aa15.33■□□□□ 0.04
TRIM47-202ENST00000585333 HERC5Q9UII4 1024 aaKnown RBP15.33■□□□□ 0.04
TRIM47-202ENST00000585333 TCP10L2B9ZVM9 353 aa15.32■□□□□ 0.04
TRIM47-202ENST00000585333 SEC24BO95487 1268 aa15.32■□□□□ 0.04
TRIM47-202ENST00000585333 SUPT20HL1Q3ZLR7 823 aa15.32■□□□□ 0.04
TRIM47-202ENST00000585333 CCDC178Q5BJE1 867 aa15.32■□□□□ 0.04
TRIM47-202ENST00000585333 AKNAD1Q5T1N1 836 aa15.32■□□□□ 0.04
TRIM47-202ENST00000585333 DCAF15Q66K64 600 aa15.32■□□□□ 0.04
TRIM47-202ENST00000585333 CRACR2BQ8N4Y2 399 aaPredicted RBP15.32■□□□□ 0.04
TRIM47-202ENST00000585333 NCOA7Q8NI08 942 aa15.32■□□□□ 0.04
TRIM47-202ENST00000585333 TRPM4Q8TD43 1214 aa15.32■□□□□ 0.04
TRIM47-202ENST00000585333 STAG1Q8WVM7 1258 aa15.32■□□□□ 0.04
TRIM47-202ENST00000585333 MTA3Q9BTC8 594 aa15.32■□□□□ 0.04
TRIM47-202ENST00000585333 GGA3Q9NZ52 723 aa15.32■□□□□ 0.04
TRIM47-202ENST00000585333 SERPINB13Q9UIV8 391 aa15.32■□□□□ 0.04
TRIM47-202ENST00000585333 FOXP2O15409 715 aa15.31■□□□□ 0.04
TRIM47-202ENST00000585333 CYP21A2P08686 494 aa15.31■□□□□ 0.04
TRIM47-202ENST00000585333 NF2P35240 595 aa15.31■□□□□ 0.04
TRIM47-202ENST00000585333 SART3Q15020 963 aaKnown RBP15.31■□□□□ 0.04
TRIM47-202ENST00000585333 RABEP1Q15276 862 aa15.31■□□□□ 0.04
TRIM47-202ENST00000585333 ANGEL2Q5VTE6 544 aaKnown RBP15.31■□□□□ 0.04
TRIM47-202ENST00000585333 ESR2Q92731 530 aa15.31■□□□□ 0.04
TRIM47-202ENST00000585333 CSRNP1Q96S65 589 aa15.31■□□□□ 0.04
TRIM47-202ENST00000585333 MKNK2Q9HBH9 465 aa15.31■□□□□ 0.04
TRIM47-202ENST00000585333 FAM198AQ9UFP1 575 aa15.31■□□□□ 0.04
TRIM47-202ENST00000585333 PGAP2Q9UHJ9 254 aa15.31■□□□□ 0.04
TRIM47-202ENST00000585333 LAMA4Q16363 1823 aa15.31■□□□□ 0.04
TRIM47-202ENST00000585333 TBC1D12O60347 775 aa15.3■□□□□ 0.04
TRIM47-202ENST00000585333 LAMB1P07942 1786 aa15.3■□□□□ 0.04
TRIM47-202ENST00000585333 TCP10Q12799 353 aa15.3■□□□□ 0.04
TRIM47-202ENST00000585333 NFIAQ12857 509 aa15.3■□□□□ 0.04
TRIM47-202ENST00000585333 RASA3Q14644 834 aa15.3■□□□□ 0.04
TRIM47-202ENST00000585333 EAPPQ56P03 285 aaPredicted RBP15.3■□□□□ 0.04
TRIM47-202ENST00000585333 LDHDQ86WU2 507 aa15.3■□□□□ 0.04
TRIM47-202ENST00000585333 ADAMTSL1Q8N6G6 1762 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms