RNA–Protein interactions for RNA: ENST00000584424.1

TTC39C-210, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-210ENST00000584424 BHLHE22Q8NFJ8 381 aaPredicted RBP7.12□□□□□ -1.27
TTC39C-210ENST00000584424 ZSCAN18Q8TBC5 510 aaPredicted RBP7.12□□□□□ -1.27
TTC39C-210ENST00000584424 KCNB2Q92953 911 aa7.12□□□□□ -1.27
TTC39C-210ENST00000584424 NEFLP07196 543 aa7.11□□□□□ -1.27
TTC39C-210ENST00000584424 GSTP1P09211 210 aaKnown RBP7.11□□□□□ -1.27
TTC39C-210ENST00000584424 ORC1Q13415 861 aa7.11□□□□□ -1.27
TTC39C-210ENST00000584424 KIF4BQ2VIQ3 1234 aa7.11□□□□□ -1.27
TTC39C-210ENST00000584424 LILRA6Q6PI73 481 aa7.11□□□□□ -1.27
TTC39C-210ENST00000584424 MPZL3Q6UWV2 235 aa7.11□□□□□ -1.27
TTC39C-210ENST00000584424 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.11□□□□□ -1.27
TTC39C-210ENST00000584424 LRRC56Q8IYG6 542 aaPredicted RBP7.11□□□□□ -1.27
TTC39C-210ENST00000584424 ABCB6Q9NP58 842 aa7.11□□□□□ -1.27
TTC39C-210ENST00000584424 SERPINA10Q9UK55 444 aa7.11□□□□□ -1.27
TTC39C-210ENST00000584424 BRPF3Q9ULD4 1205 aa7.11□□□□□ -1.27
TTC39C-210ENST00000584424 TMEM88BA6NKF7 163 aa7.1□□□□□ -1.27
TTC39C-210ENST00000584424 GADD45BO75293 160 aaPredicted RBP7.1□□□□□ -1.27
TTC39C-210ENST00000584424 HNRNPUQ00839 825 aaKnown RBP eCLIP7.1□□□□□ -1.27
TTC39C-210ENST00000584424 FAAP100Q0VG06 881 aa7.1□□□□□ -1.27
TTC39C-210ENST00000584424 FYB2Q5VWT5 728 aa7.1□□□□□ -1.27
TTC39C-210ENST00000584424 SYDE1Q6ZW31 735 aaPredicted RBP7.1□□□□□ -1.27
TTC39C-210ENST00000584424 CILP2Q8IUL8 1156 aa7.1□□□□□ -1.27
TTC39C-210ENST00000584424 ASB11Q8WXH4 323 aa7.1□□□□□ -1.27
TTC39C-210ENST00000584424 ISL2Q96A47 359 aa7.1□□□□□ -1.27
TTC39C-210ENST00000584424 PPP1R16BQ96T49 567 aa7.1□□□□□ -1.27
TTC39C-210ENST00000584424 PCDHGC5Q9Y5F6 944 aa7.1□□□□□ -1.27
TTC39C-210ENST00000584424 CPNE3O75131 537 aaKnown RBP7.09□□□□□ -1.27
TTC39C-210ENST00000584424 NEFMP07197 916 aa7.09□□□□□ -1.27
TTC39C-210ENST00000584424 PTPN12Q05209 780 aaKnown RBP7.09□□□□□ -1.27
TTC39C-210ENST00000584424 PRR23BQ6ZRT6 265 aa7.09□□□□□ -1.27
TTC39C-210ENST00000584424 LCNL1Q6ZST4 164 aa7.09□□□□□ -1.27
TTC39C-210ENST00000584424 ANKLE2Q86XL3 938 aa7.09□□□□□ -1.27
TTC39C-210ENST00000584424 HEXIM2Q96MH2 286 aaKnown RBP7.09□□□□□ -1.27
TTC39C-210ENST00000584424 GPN3Q9UHW5 284 aaPredicted RBP7.09□□□□□ -1.27
TTC39C-210ENST00000584424 CTNND2Q9UQB3 1225 aa7.09□□□□□ -1.27
TTC39C-210ENST00000584424 SNX11Q9Y5W9 270 aa7.09□□□□□ -1.27
TTC39C-210ENST00000584424 TMEM238LA0A1B0GVL6 79 aa7.08□□□□□ -1.28
TTC39C-210ENST00000584424 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.08□□□□□ -1.28
TTC39C-210ENST00000584424 TSPAN15O95858 294 aa7.08□□□□□ -1.28
TTC39C-210ENST00000584424 ZSCAN22P10073 491 aaPredicted RBP7.08□□□□□ -1.28
TTC39C-210ENST00000584424 ECM1Q16610 540 aa7.08□□□□□ -1.28
TTC39C-210ENST00000584424 C1QL4Q86Z23 238 aa7.08□□□□□ -1.28
TTC39C-210ENST00000584424 TNKS2Q9H2K2 1166 aa7.08□□□□□ -1.28
TTC39C-210ENST00000584424 KRT82Q9NSB4 513 aa7.08□□□□□ -1.28
TTC39C-210ENST00000584424 CARNS1A5YM72 827 aa7.07□□□□□ -1.28
TTC39C-210ENST00000584424 AFMP43652 599 aa7.07□□□□□ -1.28
TTC39C-210ENST00000584424 RPS26P11Q5JNZ5 115 aaPredicted RBP7.07□□□□□ -1.28
TTC39C-210ENST00000584424 KRTAP4-5Q9BYR2 181 aa7.07□□□□□ -1.28
TTC39C-210ENST00000584424 LMCD1Q9NZU5 365 aa7.07□□□□□ -1.28
TTC39C-210ENST00000584424 GTF2IRD1Q9UHL9 959 aa7.07□□□□□ -1.28
TTC39C-210ENST00000584424 PHLDB3Q6NSJ2 640 aa7.06□□□□□ -1.28
TTC39C-210ENST00000584424 DTHD1Q6ZMT9 781 aa7.06□□□□□ -1.28
TTC39C-210ENST00000584424 B8ZZF3 427 aa7.05□□□□□ -1.28
TTC39C-210ENST00000584424 PRRG2O14669 202 aa7.05□□□□□ -1.28
TTC39C-210ENST00000584424 GLI1P08151 1106 aa7.05□□□□□ -1.28
TTC39C-210ENST00000584424 C1QTNF9P0C862 333 aa7.05□□□□□ -1.28
TTC39C-210ENST00000584424 PPP2R3AQ06190 1150 aa7.05□□□□□ -1.28
TTC39C-210ENST00000584424 PRPF40BQ6NWY9 871 aaKnown RBP7.05□□□□□ -1.28
TTC39C-210ENST00000584424 SPACA3Q8IXA5 215 aa7.05□□□□□ -1.28
TTC39C-210ENST00000584424 RNF214Q8ND24 703 aa7.05□□□□□ -1.28
TTC39C-210ENST00000584424 CCDC74AQ96AQ1 378 aa7.05□□□□□ -1.28
TTC39C-210ENST00000584424 KIRREL1Q96J84 757 aa7.05□□□□□ -1.28
TTC39C-210ENST00000584424 CECR2Q9BXF3 1484 aa7.04□□□□□ -1.28
TTC39C-210ENST00000584424 NCANO14594 1321 aa7.04□□□□□ -1.28
TTC39C-210ENST00000584424 TMEM67Q5HYA8 995 aa7.04□□□□□ -1.28
TTC39C-210ENST00000584424 MAP1SQ66K74 1059 aaPredicted RBP7.04□□□□□ -1.28
TTC39C-210ENST00000584424 CYFIP1Q7L576 1253 aa7.04□□□□□ -1.28
TTC39C-210ENST00000584424 DIRC2Q96SL1 478 aa7.04□□□□□ -1.28
TTC39C-210ENST00000584424 TMEM39AQ9NV64 488 aa7.04□□□□□ -1.28
TTC39C-210ENST00000584424 TRAK1Q9UPV9 953 aa7.04□□□□□ -1.28
TTC39C-210ENST00000584424 CSADQ9Y600 493 aa7.04□□□□□ -1.28
TTC39C-210ENST00000584424 ARID3CA6NKF2 412 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 GNAT3A8MTJ3 354 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 H3BRB1 525 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 NFIBO00712 420 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 NDUFB5O43674 189 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 FCGRTP55899 365 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 GRM2Q14416 872 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 NKPD1Q17RQ9 610 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 FAM214BQ7L5A3 538 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 PDZD3Q86UT5 571 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 GLYCTKQ8IVS8 523 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 TMC1Q8TDI8 760 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 STK35Q8TDR2 534 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 ACSBG1Q96GR2 724 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 TUT1Q9H6E5 874 aaKnown RBP7.03□□□□□ -1.28
TTC39C-210ENST00000584424 PRDM10Q9NQV6 1147 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 PICK1Q9NRD5 415 aa7.03□□□□□ -1.28
TTC39C-210ENST00000584424 EIF1AYO14602 144 aaKnown RBP7.02□□□□□ -1.29
TTC39C-210ENST00000584424 ICMTO60725 284 aa7.02□□□□□ -1.29
TTC39C-210ENST00000584424 ERVK-24P63145 666 aa7.02□□□□□ -1.29
TTC39C-210ENST00000584424 PDE3BQ13370 1112 aa7.02□□□□□ -1.29
TTC39C-210ENST00000584424 ZC3H12AQ5D1E8 599 aaKnown RBP7.02□□□□□ -1.29
TTC39C-210ENST00000584424 PPM1JQ5JR12 505 aa7.02□□□□□ -1.29
TTC39C-210ENST00000584424 LCE5AQ5TCM9 118 aa7.02□□□□□ -1.29
TTC39C-210ENST00000584424 SIAH1Q8IUQ4 282 aa7.02□□□□□ -1.29
TTC39C-210ENST00000584424 SULF2Q8IWU5 870 aa7.02□□□□□ -1.29
TTC39C-210ENST00000584424 NSUN3Q9H649 340 aaKnown RBP7.02□□□□□ -1.29
TTC39C-210ENST00000584424 CARS2Q9HA77 564 aaKnown RBP7.02□□□□□ -1.29
TTC39C-210ENST00000584424 PITPNM2Q9BZ72 1349 aa7.01□□□□□ -1.29
TTC39C-210ENST00000584424 IGF2BP3O00425 579 aaKnown RBP eCLIP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms