RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 NBPF3Q9H094 633 aa17.36■□□□□ 0.37
SENP3-208ENST00000583277 CNNM2Q9H8M5 875 aa17.36■□□□□ 0.37
SENP3-208ENST00000583277 PDRG1Q9NUG6 133 aa17.36■□□□□ 0.37
SENP3-208ENST00000583277 MKRN1Q9UHC7 482 aaKnown RBP17.36■□□□□ 0.37
SENP3-208ENST00000583277 K7ELQ4 463 aaPredicted RBP17.35■□□□□ 0.37
SENP3-208ENST00000583277 SLC3A2P08195 630 aaKnown RBP17.35■□□□□ 0.37
SENP3-208ENST00000583277 USP17L8P0C7I0 530 aa17.35■□□□□ 0.37
SENP3-208ENST00000583277 YBX3P16989 372 aaKnown RBP eCLIP17.35■□□□□ 0.379e-6■□□□□ 10.4
SENP3-208ENST00000583277 AKNAD1Q5T1N1 836 aa17.35■□□□□ 0.37
SENP3-208ENST00000583277 CTR9Q6PD62 1173 aa17.35■□□□□ 0.37
SENP3-208ENST00000583277 STAG1Q8WVM7 1258 aa17.35■□□□□ 0.37
SENP3-208ENST00000583277 MCM9Q9NXL9 1143 aa17.35■□□□□ 0.37
SENP3-208ENST00000583277 FLT1P17948 1338 aa17.35■□□□□ 0.37
SENP3-208ENST00000583277 MINDY4BA8MYZ0 360 aa17.34■□□□□ 0.37
SENP3-208ENST00000583277 USP17L12C9JPN9 530 aa17.34■□□□□ 0.37
SENP3-208ENST00000583277 USP17L21D6R901 530 aa17.34■□□□□ 0.37
SENP3-208ENST00000583277 CD2BP2O95400 341 aaKnown RBP17.34■□□□□ 0.37
SENP3-208ENST00000583277 ANKRD1Q15327 319 aa17.34■□□□□ 0.37
SENP3-208ENST00000583277 CFAP100Q494V2 611 aa17.34■□□□□ 0.37
SENP3-208ENST00000583277 CDC42EP5Q6NZY7 148 aa17.34■□□□□ 0.37
SENP3-208ENST00000583277 MFSD6Q6ZSS7 791 aa17.34■□□□□ 0.37
SENP3-208ENST00000583277 DHX32Q7L7V1 743 aaKnown RBP17.34■□□□□ 0.37
SENP3-208ENST00000583277 WDR19Q8NEZ3 1342 aa17.34■□□□□ 0.37
SENP3-208ENST00000583277 ALDH8A1Q9H2A2 487 aaPredicted RBP17.34■□□□□ 0.37
SENP3-208ENST00000583277 USP40Q9NVE5 1235 aa17.34■□□□□ 0.37
SENP3-208ENST00000583277 ROBO3Q96MS0 1386 aa17.33■□□□□ 0.37
SENP3-208ENST00000583277 NT5C2P49902 561 aa17.33■□□□□ 0.37
SENP3-208ENST00000583277 MAPKAPK5Q8IW41 473 aa17.33■□□□□ 0.37
SENP3-208ENST00000583277 KRT23Q9C075 422 aa17.33■□□□□ 0.37
SENP3-208ENST00000583277 ZBTB12Q9Y330 459 aaPredicted RBP17.33■□□□□ 0.37
SENP3-208ENST00000583277 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
SENP3-208ENST00000583277 MCM5P33992 734 aa17.32■□□□□ 0.36
SENP3-208ENST00000583277 CTDSPL2Q05D32 466 aa17.32■□□□□ 0.36
SENP3-208ENST00000583277 MTMR14Q8NCE2 650 aa17.32■□□□□ 0.36
SENP3-208ENST00000583277 DPF2Q92785 391 aa17.32■□□□□ 0.36
SENP3-208ENST00000583277 SPDYE2BA6NHP3 402 aa17.32■□□□□ 0.36
SENP3-208ENST00000583277 WDHD1O75717 1129 aaPredicted RBP17.32■□□□□ 0.36
SENP3-208ENST00000583277 SPDYE6P0CI01 402 aa17.32■□□□□ 0.36
SENP3-208ENST00000583277 CPA1P15085 419 aa17.32■□□□□ 0.36
SENP3-208ENST00000583277 AK2P54819 239 aa17.32■□□□□ 0.36
SENP3-208ENST00000583277 DLGAP5Q15398 846 aa17.32■□□□□ 0.36
SENP3-208ENST00000583277 C12orf60Q5U649 245 aa17.32■□□□□ 0.36
SENP3-208ENST00000583277 MB21D2Q8IYB1 491 aaPredicted RBP17.32■□□□□ 0.36
SENP3-208ENST00000583277 NEDD4P46934 1319 aa17.31■□□□□ 0.36
SENP3-208ENST00000583277 ZNF541Q9H0D2 1346 aa17.31■□□□□ 0.36
SENP3-208ENST00000583277 POLR3DP05423 398 aaPredicted RBP17.31■□□□□ 0.36
SENP3-208ENST00000583277 IDI2Q9BXS1 227 aa17.31■□□□□ 0.36
SENP3-208ENST00000583277 TMOD2Q9NZR1 351 aa17.31■□□□□ 0.36
SENP3-208ENST00000583277 UTRNP46939 3433 aa17.31■□□□□ 0.36
SENP3-208ENST00000583277 GRIN3BO60391 1043 aa17.3■□□□□ 0.36
SENP3-208ENST00000583277 FGRP09769 529 aa17.3■□□□□ 0.36
SENP3-208ENST00000583277 ZNF280AP59817 542 aaPredicted RBP17.3■□□□□ 0.36
SENP3-208ENST00000583277 FGD1P98174 961 aa17.3■□□□□ 0.36
SENP3-208ENST00000583277 EXOSC10Q01780 885 aaKnown RBP17.3■□□□□ 0.36
SENP3-208ENST00000583277 PDE4BQ07343 736 aa17.3■□□□□ 0.36
SENP3-208ENST00000583277 GPR162Q16538 588 aa17.3■□□□□ 0.36
SENP3-208ENST00000583277 ZNF287Q9HBT7 754 aa17.3■□□□□ 0.36
SENP3-208ENST00000583277 RNF181Q9P0P0 153 aa17.3■□□□□ 0.36
SENP3-208ENST00000583277 LIMCH1Q9UPQ0 1083 aa17.3■□□□□ 0.36
SENP3-208ENST00000583277 GJA3Q9Y6H8 435 aa17.3■□□□□ 0.36
SENP3-208ENST00000583277 COL2A1P02458 1487 aaPredicted RBP17.3■□□□□ 0.36
SENP3-208ENST00000583277 MYH8P13535 1937 aa17.29■□□□□ 0.36
SENP3-208ENST00000583277 CYP2D7A0A087X1C5 515 aa17.29■□□□□ 0.36
SENP3-208ENST00000583277 ORC4O43929 436 aa17.29■□□□□ 0.36
SENP3-208ENST00000583277 GMPSP49915 693 aaPredicted RBP17.29■□□□□ 0.36
SENP3-208ENST00000583277 PICALMQ13492 652 aa17.29■□□□□ 0.36
SENP3-208ENST00000583277 GPC2Q8N158 579 aa17.29■□□□□ 0.36
SENP3-208ENST00000583277 FBXL16Q8N461 479 aa17.29■□□□□ 0.36
SENP3-208ENST00000583277 ESR2Q92731 530 aa17.29■□□□□ 0.36
SENP3-208ENST00000583277 OSBPL5Q9H0X9 879 aaPredicted RBP17.29■□□□□ 0.36
SENP3-208ENST00000583277 SAP30BPQ9UHR5 308 aaKnown RBP17.29■□□□□ 0.36
SENP3-208ENST00000583277 B4E1Z4 1266 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 PRC1O43663 620 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 MYO1BO43795 1136 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 CYP2D6P10635 497 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 Q6ZUG5 572 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 TTC6Q86TZ1 520 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 PRMT6Q96LA8 375 aaPredicted RBP17.28■□□□□ 0.36
SENP3-208ENST00000583277 ZSCAN31Q96LW9 406 aaPredicted RBP17.28■□□□□ 0.36
SENP3-208ENST00000583277 TCEANC2Q96MN5 208 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 MYOZ2Q9NPC6 264 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 TOMM22Q9NS69 142 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 TAOK2Q9UL54 1235 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.28■□□□□ 0.36
SENP3-208ENST00000583277 PCDHAC2Q9Y5I4 1007 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 ZC3H4Q9UPT8 1303 aaKnown RBP17.28■□□□□ 0.36
SENP3-208ENST00000583277 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
SENP3-208ENST00000583277 COL9A3Q14050 684 aaPredicted RBP17.28■□□□□ 0.36
SENP3-208ENST00000583277 TMX3Q96JJ7 454 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 MTA3Q9BTC8 594 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 AGXT2Q9BYV1 514 aa17.28■□□□□ 0.36
SENP3-208ENST00000583277 DHX36Q9H2U1 1008 aaKnown RBP17.28■□□□□ 0.36
SENP3-208ENST00000583277 TDRD3Q9H7E2 651 aaKnown RBP17.28■□□□□ 0.36
SENP3-208ENST00000583277 DDX4Q9NQI0 724 aaKnown RBP17.28■□□□□ 0.36
SENP3-208ENST00000583277 SH2B1Q9NRF2 756 aaPredicted RBP17.28■□□□□ 0.36
SENP3-208ENST00000583277 KDM4AO75164 1064 aa17.27■□□□□ 0.35
SENP3-208ENST00000583277 ENTPD3O75355 529 aa17.27■□□□□ 0.35
SENP3-208ENST00000583277 HLA-DOAP06340 250 aa17.27■□□□□ 0.35
SENP3-208ENST00000583277 SLC4A3P48751 1232 aa17.27■□□□□ 0.35
SENP3-208ENST00000583277 NFIAQ12857 509 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms