RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 NCOA5Q9HCD5 579 aaKnown RBP7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 TOMM22Q9NS69 142 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 USP40Q9NVE5 1235 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 MCM9Q9NXL9 1143 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 BRPF3Q9ULD4 1205 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 NAP1L2Q9ULW6 460 aaPredicted RBP7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 SCAF8Q9UPN6 1271 aaKnown RBP7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 LIMCH1Q9UPQ0 1083 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 KIAA1551Q9HCM1 1747 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 AKAP11Q9UKA4 1901 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CACNA1SQ13698 1873 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CLRN2A0PK11 232 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 FAM196BA6NMK8 535 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 SH2B2O14492 632 aaPredicted RBP7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 NMT2O60551 498 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 JAK2O60674 1132 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 EGFRP00533 1210 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 LDHCP07864 332 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 HSP90AA1P07900 732 aaKnown RBP7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 VIL1P09327 827 aaKnown RBP7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 RXRAP19793 462 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 RBM5P52756 815 aaKnown RBP eCLIP7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 FOSBP53539 338 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 SHROOM1Q2M3G4 852 aaPredicted RBP7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CFAP100Q494V2 611 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 AKNAD1Q5T1N1 836 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 ARHGAP27Q6ZUM4 889 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 RALYLQ86SE5 291 aaKnown RBP7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CDAN1Q8IWY9 1227 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 NCOA7Q8NI08 942 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 STAG1Q8WVM7 1258 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 TEKT1Q969V4 418 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 FAM163AQ96GL9 167 aaPredicted RBP7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 SYT17Q9BSW7 474 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 ZNRF3Q9ULT6 936 aa7.28□□□□□ -1.24
RNU4ATAC-201ENST00000580972 ASTN2O75129 1339 aaPredicted RBP7.27□□□□□ -1.24
RNU4ATAC-201ENST00000580972 KLF18A0A0U1RQI7 1052 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 BAG3O95817 575 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 FKBP1AP62942 108 aaKnown RBP7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 CCT2P78371 535 aaKnown RBP7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 SCRN1Q12765 414 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 TCP10Q12799 353 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 SOGA3Q5TF21 947 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 C12orf60Q5U649 245 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 SH3BP5LQ7L8J4 393 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 CCDC144CPQ8IYA2 1237 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 CHMP4CQ96CF2 233 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 PRMT6Q96LA8 375 aaPredicted RBP7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 NOL10Q9BSC4 688 aaKnown RBP7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 ALDH8A1Q9H2A2 487 aaPredicted RBP7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 TDRD3Q9H7E2 651 aaKnown RBP7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 LY9Q9HBG7 655 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 ATP8A2Q9NTI2 1148 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 ZSWIM5Q9P217 1185 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 FAM198AQ9UFP1 575 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 ANAPC4Q9UJX5 808 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 HPS5Q9UPZ3 1129 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 SUGT1Q9Y2Z0 365 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 ZDHHC9Q9Y397 364 aa7.27□□□□□ -1.25
RNU4ATAC-201ENST00000580972 GOLGA8BA8MQT2 603 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 UBE2Q2LH0YL09 131 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 IFIT3O14879 490 aaKnown RBP7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 RANBP6O60518 1105 aaKnown RBP7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 CTDNEP1O95476 244 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 POLR3DP05423 398 aaPredicted RBP7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 PDIA3P30101 505 aaKnown RBP7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 MCM5P33992 734 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 MCM2P49736 904 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 GMPSP49915 693 aaPredicted RBP7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 FGD1P98174 961 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 SBK1Q52WX2 424 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 TMEM67Q5HYA8 995 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 RBM26Q5T8P6 1007 aaKnown RBP7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 CIAPIN1Q6FI81 312 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 GIMAP6Q6P9H5 292 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 HHIPL2Q6UWX4 724 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 MFSD6Q6ZSS7 791 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 RASGRP2Q7LDG7 609 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 CLEC10AQ8IUN9 316 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 IGDCC4Q8TDY8 1250 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 DDX11Q96FC9 970 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 ZDHHC15Q96MV8 337 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 AGXT2Q9BYV1 514 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 ARPP21Q9UBL0 812 aaPredicted RBP7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 GJA3Q9Y6H8 435 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 LTBP3Q9NS15 1303 aa7.26□□□□□ -1.25
RNU4ATAC-201ENST00000580972 DDTLA6NHG4 134 aaPredicted RBP7.25□□□□□ -1.25
RNU4ATAC-201ENST00000580972 SPDYE2BA6NHP3 402 aa7.25□□□□□ -1.25
RNU4ATAC-201ENST00000580972 TCP10L2B9ZVM9 353 aa7.25□□□□□ -1.25
RNU4ATAC-201ENST00000580972 PFKFB2O60825 505 aa7.25□□□□□ -1.25
RNU4ATAC-201ENST00000580972 HMGB1P09429 215 aaKnown RBP7.25□□□□□ -1.25
RNU4ATAC-201ENST00000580972 FGRP09769 529 aa7.25□□□□□ -1.25
RNU4ATAC-201ENST00000580972 SPDYE6P0CI01 402 aa7.25□□□□□ -1.25
RNU4ATAC-201ENST00000580972 RASA1P20936 1047 aa7.25□□□□□ -1.25
RNU4ATAC-201ENST00000580972 GJB2P29033 226 aa7.25□□□□□ -1.25
RNU4ATAC-201ENST00000580972 CDK8P49336 464 aa7.25□□□□□ -1.25
RNU4ATAC-201ENST00000580972 TRDNQ13061 729 aa7.25□□□□□ -1.25
RNU4ATAC-201ENST00000580972 NBR1Q14596 966 aa7.25□□□□□ -1.25
RNU4ATAC-201ENST00000580972 GRIPAP1Q4V328 841 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms