RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 USP17L21D6R901 530 aa16.49■□□□□ 0.23
TSEN54-206ENST00000579449 WDHD1O75717 1129 aaPredicted RBP16.49■□□□□ 0.23
TSEN54-206ENST00000579449 DDNO94850 711 aaPredicted RBP16.49■□□□□ 0.23
TSEN54-206ENST00000579449 KRT32Q14532 448 aa16.49■□□□□ 0.23
TSEN54-206ENST00000579449 RABEP1Q15276 862 aa16.49■□□□□ 0.23
TSEN54-206ENST00000579449 ZBED3Q96IU2 234 aaPredicted RBP16.49■□□□□ 0.23
TSEN54-206ENST00000579449 JAKMIP1Q96N16 626 aaKnown RBP16.49■□□□□ 0.23
TSEN54-206ENST00000579449 NBPF3Q9H094 633 aa16.49■□□□□ 0.23
TSEN54-206ENST00000579449 DDX4Q9NQI0 724 aaKnown RBP16.49■□□□□ 0.23
TSEN54-206ENST00000579449 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
TSEN54-206ENST00000579449 MCM9Q9NXL9 1143 aa16.49■□□□□ 0.23
TSEN54-206ENST00000579449 CYP2D7A0A087X1C5 515 aa16.48■□□□□ 0.23
TSEN54-206ENST00000579449 MINDY4BA8MYZ0 360 aa16.48■□□□□ 0.23
TSEN54-206ENST00000579449 E7EWF7 191 aa16.48■□□□□ 0.23
TSEN54-206ENST00000579449 CTDSPL2Q05D32 466 aa16.48■□□□□ 0.23
TSEN54-206ENST00000579449 PPARAQ07869 468 aa16.48■□□□□ 0.23
TSEN54-206ENST00000579449 PICALMQ13492 652 aa16.48■□□□□ 0.23
TSEN54-206ENST00000579449 SBK1Q52WX2 424 aa16.48■□□□□ 0.23
TSEN54-206ENST00000579449 STOX1Q6ZVD7 989 aa16.48■□□□□ 0.23
TSEN54-206ENST00000579449 SAP30BPQ9UHR5 308 aaKnown RBP16.48■□□□□ 0.23
TSEN54-206ENST00000579449 H7C1D1 291 aa16.47■□□□□ 0.23
TSEN54-206ENST00000579449 CYP2D6P10635 497 aa16.47■□□□□ 0.23
TSEN54-206ENST00000579449 CASTP20810 708 aaKnown RBP16.47■□□□□ 0.23
TSEN54-206ENST00000579449 ANP32AP39687 249 aaKnown RBP16.47■□□□□ 0.23
TSEN54-206ENST00000579449 CACNB3P54284 484 aa16.47■□□□□ 0.23
TSEN54-206ENST00000579449 NFIAQ12857 509 aa16.47■□□□□ 0.23
TSEN54-206ENST00000579449 RBM26Q5T8P6 1007 aaKnown RBP16.47■□□□□ 0.23
TSEN54-206ENST00000579449 TBC1D10CQ8IV04 446 aa16.47■□□□□ 0.23
TSEN54-206ENST00000579449 IDI2Q9BXS1 227 aa16.47■□□□□ 0.23
TSEN54-206ENST00000579449 TM6SF1Q9BZW5 370 aa16.47■□□□□ 0.23
TSEN54-206ENST00000579449 GPRC5DQ9NZD1 345 aa16.47■□□□□ 0.23
TSEN54-206ENST00000579449 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
TSEN54-206ENST00000579449 ZNF70Q9UC06 446 aaPredicted RBP16.47■□□□□ 0.23
TSEN54-206ENST00000579449 ANAPC4Q9UJX5 808 aa16.47■□□□□ 0.23
TSEN54-206ENST00000579449 ZC3H4Q9UPT8 1303 aaKnown RBP16.46■□□□□ 0.23
TSEN54-206ENST00000579449 CLRN2A0PK11 232 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 SMIM22K7EJ46 135 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 WNT10BO00744 389 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 EGFRP00533 1210 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 POLR3DP05423 398 aaPredicted RBP16.46■□□□□ 0.23
TSEN54-206ENST00000579449 PSMA5P28066 241 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 EVX2Q03828 476 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 SLC4A8Q2Y0W8 1093 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 SPDYE2Q495Y8 402 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 TBC1D10BQ4KMP7 808 aaPredicted RBP16.46■□□□□ 0.23
TSEN54-206ENST00000579449 C12orf60Q5U649 245 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 SAMD7Q7Z3H4 446 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 NEK1Q96PY6 1258 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 ZSWIM6Q9HCJ5 1215 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 TMOD2Q9NZR1 351 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 FAM198AQ9UFP1 575 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 TACC3Q9Y6A5 838 aa16.46■□□□□ 0.23
TSEN54-206ENST00000579449 CPA1P15085 419 aa16.45■□□□□ 0.22
TSEN54-206ENST00000579449 EPS15P42566 896 aa16.45■□□□□ 0.22
TSEN54-206ENST00000579449 COL9A3Q14050 684 aaPredicted RBP16.45■□□□□ 0.22
TSEN54-206ENST00000579449 KIF4BQ2VIQ3 1234 aa16.45■□□□□ 0.22
TSEN54-206ENST00000579449 NBPF9Q3BBW0 867 aa16.45■□□□□ 0.22
TSEN54-206ENST00000579449 AKNAD1Q5T1N1 836 aa16.45■□□□□ 0.22
TSEN54-206ENST00000579449 DPY19L2Q6NUT2 758 aa16.45■□□□□ 0.22
TSEN54-206ENST00000579449 AMOTL1Q8IY63 956 aa16.45■□□□□ 0.22
TSEN54-206ENST00000579449 STK11IPQ8N1F8 1099 aa16.45■□□□□ 0.22
TSEN54-206ENST00000579449 STAG1Q8WVM7 1258 aa16.45■□□□□ 0.22
TSEN54-206ENST00000579449 UPF3BQ9BZI7 483 aaKnown RBP16.45■□□□□ 0.22
TSEN54-206ENST00000579449 OSBPL5Q9H0X9 879 aaPredicted RBP16.45■□□□□ 0.22
TSEN54-206ENST00000579449 INCENPQ9NQS7 918 aa16.45■□□□□ 0.22
TSEN54-206ENST00000579449 MYO1BO43795 1136 aa16.44■□□□□ 0.22
TSEN54-206ENST00000579449 NEK4P51957 841 aa16.44■□□□□ 0.22
TSEN54-206ENST00000579449 TCP10Q12799 353 aa16.44■□□□□ 0.22
TSEN54-206ENST00000579449 BLOC1S2Q6QNY1 142 aa16.44■□□□□ 0.22
TSEN54-206ENST00000579449 MFSD6Q6ZSS7 791 aa16.44■□□□□ 0.22
TSEN54-206ENST00000579449 RUFY3Q7L099 469 aa16.44■□□□□ 0.22
TSEN54-206ENST00000579449 ZFPM1Q8IX07 1006 aa16.44■□□□□ 0.22
TSEN54-206ENST00000579449 CYP46A1Q9Y6A2 500 aa16.44■□□□□ 0.22
TSEN54-206ENST00000579449 NEDD4P46934 1319 aa16.44■□□□□ 0.22
TSEN54-206ENST00000579449 UTRNP46939 3433 aa16.44■□□□□ 0.22
TSEN54-206ENST00000579449 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
TSEN54-206ENST00000579449 GLTPD2A6NH11 291 aa16.43■□□□□ 0.22
TSEN54-206ENST00000579449 TCP10L2B9ZVM9 353 aa16.43■□□□□ 0.22
TSEN54-206ENST00000579449 ENTPD3O75355 529 aa16.43■□□□□ 0.22
TSEN54-206ENST00000579449 LMOD1P29536 600 aaPredicted RBP16.43■□□□□ 0.22
TSEN54-206ENST00000579449 PLCD1P51178 756 aa16.43■□□□□ 0.22
TSEN54-206ENST00000579449 NCOA7Q8NI08 942 aa16.43■□□□□ 0.22
TSEN54-206ENST00000579449 TRPM4Q8TD43 1214 aa16.43■□□□□ 0.22
TSEN54-206ENST00000579449 RNF41Q9H4P4 317 aaPredicted RBP16.43■□□□□ 0.22
TSEN54-206ENST00000579449 VEZTQ9HBM0 779 aa16.43■□□□□ 0.22
TSEN54-206ENST00000579449 ROBO3Q96MS0 1386 aa16.42■□□□□ 0.22
TSEN54-206ENST00000579449 SLC3A2P08195 630 aaKnown RBP16.42■□□□□ 0.22
TSEN54-206ENST00000579449 HMGB1P09429 215 aaKnown RBP16.42■□□□□ 0.22
TSEN54-206ENST00000579449 RPS6KB1P23443 525 aa16.42■□□□□ 0.22
TSEN54-206ENST00000579449 TRDNQ13061 729 aa16.42■□□□□ 0.22
TSEN54-206ENST00000579449 FKBP1CQ5VVH2 108 aa16.42■□□□□ 0.22
TSEN54-206ENST00000579449 RALYLQ86SE5 291 aaKnown RBP16.42■□□□□ 0.22
TSEN54-206ENST00000579449 TTC6Q86TZ1 520 aa16.42■□□□□ 0.22
TSEN54-206ENST00000579449 DYNLL2Q96FJ2 89 aa16.42■□□□□ 0.22
TSEN54-206ENST00000579449 L3MBTL3Q96JM7 780 aaPredicted RBP16.42■□□□□ 0.22
TSEN54-206ENST00000579449 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
TSEN54-206ENST00000579449 SIPA1L1O43166 1804 aa16.41■□□□□ 0.22
TSEN54-206ENST00000579449 POLR2AP24928 1970 aaKnown RBP16.41■□□□□ 0.22
TSEN54-206ENST00000579449 B4E1Z4 1266 aa16.41■□□□□ 0.22
TSEN54-206ENST00000579449 ST18O60284 1047 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms