RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 GDNFP39905 211 aa5.9□□□□□ -1.46
TOP2A-202ENST00000577541 NFKB2Q00653 900 aa5.9□□□□□ -1.46
TOP2A-202ENST00000577541 SPRED3Q2MJR0 410 aa5.9□□□□□ -1.46
TOP2A-202ENST00000577541 FAM214BQ7L5A3 538 aa5.9□□□□□ -1.46
TOP2A-202ENST00000577541 ATXN3LQ9H3M9 355 aa5.9□□□□□ -1.46
TOP2A-202ENST00000577541 ZMIZ1Q9ULJ6 1067 aa5.9□□□□□ -1.46
TOP2A-202ENST00000577541 NOVA2Q9UNW9 492 aaKnown RBP5.9□□□□□ -1.46
TOP2A-202ENST00000577541 ACIN1Q9UKV3 1341 aaKnown RBP5.9□□□□□ -1.47
TOP2A-202ENST00000577541 A0A096LPE4 126 aa5.89□□□□□ -1.47
TOP2A-202ENST00000577541 A0A1W2PPZ6 126 aa5.89□□□□□ -1.47
TOP2A-202ENST00000577541 DNM1Q05193 864 aaKnown RBP5.89□□□□□ -1.47
TOP2A-202ENST00000577541 FANCD2OSQ96PS1 177 aa5.89□□□□□ -1.47
TOP2A-202ENST00000577541 SLC26A8Q96RN1 970 aa5.89□□□□□ -1.47
TOP2A-202ENST00000577541 PHACTR2O75167 634 aa5.88□□□□□ -1.47
TOP2A-202ENST00000577541 PDGFAP04085 211 aa5.88□□□□□ -1.47
TOP2A-202ENST00000577541 PRKCSHP14314 528 aaPredicted RBP5.88□□□□□ -1.47
TOP2A-202ENST00000577541 RFX1P22670 979 aa5.88□□□□□ -1.47
TOP2A-202ENST00000577541 GRIA4P48058 902 aa5.88□□□□□ -1.47
TOP2A-202ENST00000577541 SKOR2Q2VWA4 1001 aaPredicted RBP5.88□□□□□ -1.47
TOP2A-202ENST00000577541 CFAP70Q5T0N1 1121 aa5.88□□□□□ -1.47
TOP2A-202ENST00000577541 SPACA3Q8IXA5 215 aa5.88□□□□□ -1.47
TOP2A-202ENST00000577541 CXorf38Q8TB03 319 aa5.88□□□□□ -1.47
TOP2A-202ENST00000577541 KCNC2Q96PR1 638 aa5.88□□□□□ -1.47
TOP2A-202ENST00000577541 FOXD3Q9UJU5 478 aaPredicted RBP5.88□□□□□ -1.47
TOP2A-202ENST00000577541 PCOLCE2Q9UKZ9 415 aa5.88□□□□□ -1.47
TOP2A-202ENST00000577541 CNTNAP4Q9C0A0 1308 aa5.88□□□□□ -1.47
TOP2A-202ENST00000577541 RNGTTO60942 597 aaKnown RBP5.87□□□□□ -1.47
TOP2A-202ENST00000577541 LIG1P18858 919 aa5.87□□□□□ -1.47
TOP2A-202ENST00000577541 TOP6BLQ8N6T0 577 aa5.87□□□□□ -1.47
TOP2A-202ENST00000577541 DISC1Q9NRI5 854 aa5.87□□□□□ -1.47
TOP2A-202ENST00000577541 RTEL1Q9NZ71 1219 aa5.87□□□□□ -1.47
TOP2A-202ENST00000577541 TNFRSF21O75509 655 aa5.86□□□□□ -1.47
TOP2A-202ENST00000577541 ADRB1P08588 477 aa5.86□□□□□ -1.47
TOP2A-202ENST00000577541 SLFN14P0C7P3 912 aa5.86□□□□□ -1.47
TOP2A-202ENST00000577541 ID3Q02535 119 aa5.86□□□□□ -1.47
TOP2A-202ENST00000577541 NKPD1Q17RQ9 610 aa5.86□□□□□ -1.47
TOP2A-202ENST00000577541 MARCH10Q8NA82 808 aaPredicted RBP5.86□□□□□ -1.47
TOP2A-202ENST00000577541 CARS2Q9HA77 564 aaKnown RBP5.86□□□□□ -1.47
TOP2A-202ENST00000577541 SEPT3Q9UH03 358 aa5.86□□□□□ -1.47
TOP2A-202ENST00000577541 GTF2IRD1Q9UHL9 959 aa5.86□□□□□ -1.47
TOP2A-202ENST00000577541 IGF2BP3O00425 579 aaKnown RBP eCLIP5.85□□□□□ -1.476e-7■■□□□ 11.9
TOP2A-202ENST00000577541 SRFP11831 508 aa5.85□□□□□ -1.47
TOP2A-202ENST00000577541 TTLL4Q14679 1199 aa5.85□□□□□ -1.47
TOP2A-202ENST00000577541 CLUAP1Q96AJ1 413 aa5.85□□□□□ -1.47
TOP2A-202ENST00000577541 CALR3Q96L12 384 aaKnown RBP5.85□□□□□ -1.47
TOP2A-202ENST00000577541 TCF12Q99081 682 aa5.85□□□□□ -1.47
TOP2A-202ENST00000577541 B3GALT4O96024 378 aa5.84□□□□□ -1.47
TOP2A-202ENST00000577541 MZF1P28698 734 aaPredicted RBP5.84□□□□□ -1.47
TOP2A-202ENST00000577541 CLCN7P51798 805 aa5.84□□□□□ -1.47
TOP2A-202ENST00000577541 CCNJLQ8IV13 435 aa5.84□□□□□ -1.47
TOP2A-202ENST00000577541 SNX29Q8TEQ0 813 aa5.84□□□□□ -1.47
TOP2A-202ENST00000577541 STK32AQ8WU08 396 aa5.84□□□□□ -1.47
TOP2A-202ENST00000577541 PCDHGC5Q9Y5F6 944 aa5.84□□□□□ -1.47
TOP2A-202ENST00000577541 ZNF862O60290 1169 aa5.83□□□□□ -1.48
TOP2A-202ENST00000577541 POLR3DP05423 398 aaPredicted RBP5.83□□□□□ -1.48
TOP2A-202ENST00000577541 CELA3BP08861 270 aa5.83□□□□□ -1.48
TOP2A-202ENST00000577541 HCLS1P14317 486 aaPredicted RBP5.83□□□□□ -1.48
TOP2A-202ENST00000577541 AP3B2Q13367 1082 aa5.83□□□□□ -1.48
TOP2A-202ENST00000577541 ZXDCQ2QGD7 858 aaPredicted RBP5.83□□□□□ -1.48
TOP2A-202ENST00000577541 ABHD4Q8TB40 342 aa5.83□□□□□ -1.48
TOP2A-202ENST00000577541 BAHD1Q8TBE0 780 aaPredicted RBP5.83□□□□□ -1.48
TOP2A-202ENST00000577541 CCDC120Q96HB5 630 aa5.83□□□□□ -1.48
TOP2A-202ENST00000577541 CCDC86Q9H6F5 360 aaKnown RBP5.83□□□□□ -1.48
TOP2A-202ENST00000577541 SLAIN2Q9P270 581 aa5.83□□□□□ -1.48
TOP2A-202ENST00000577541 AMOTL2Q9Y2J4 779 aa5.83□□□□□ -1.48
TOP2A-202ENST00000577541 IGHA2P01877 340 aa5.82□□□□□ -1.48
TOP2A-202ENST00000577541 NEFMP07197 916 aa5.82□□□□□ -1.48
TOP2A-202ENST00000577541 FLIIQ13045 1269 aa5.82□□□□□ -1.48
TOP2A-202ENST00000577541 SSU72Q9NP77 194 aaKnown RBP5.82□□□□□ -1.48
TOP2A-202ENST00000577541 RBAK-RBAKDNI3L0D1 243 aa5.81□□□□□ -1.48
TOP2A-202ENST00000577541 TCERG1LQ5VWI1 586 aa5.81□□□□□ -1.48
TOP2A-202ENST00000577541 ERICH6BQ5W0A0 696 aa5.81□□□□□ -1.48
TOP2A-202ENST00000577541 NPAS4Q8IUM7 802 aa5.81□□□□□ -1.48
TOP2A-202ENST00000577541 A0A1W2PP55 124 aa5.8□□□□□ -1.48
TOP2A-202ENST00000577541 GNAT3A8MTJ3 354 aa5.8□□□□□ -1.48
TOP2A-202ENST00000577541 SUV39H1O43463 412 aa5.8□□□□□ -1.48
TOP2A-202ENST00000577541 NOM1Q5C9Z4 860 aaKnown RBP5.8□□□□□ -1.48
TOP2A-202ENST00000577541 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.8□□□□□ -1.48
TOP2A-202ENST00000577541 ZC3H12CQ9C0D7 883 aaKnown RBP5.8□□□□□ -1.48
TOP2A-202ENST00000577541 LIN7BQ9HAP6 207 aa5.8□□□□□ -1.48
TOP2A-202ENST00000577541 POLIQ9UNA4 740 aa5.8□□□□□ -1.48
TOP2A-202ENST00000577541 TRIM13O60858 407 aa5.79□□□□□ -1.48
TOP2A-202ENST00000577541 RAC2P15153 192 aa5.79□□□□□ -1.48
TOP2A-202ENST00000577541 KIF4BQ2VIQ3 1234 aa5.79□□□□□ -1.48
TOP2A-202ENST00000577541 PROSER2Q86WR7 435 aaPredicted RBP5.79□□□□□ -1.48
TOP2A-202ENST00000577541 ISL2Q96A47 359 aa5.79□□□□□ -1.48
TOP2A-202ENST00000577541 XYLT2Q9H1B5 865 aa5.79□□□□□ -1.48
TOP2A-202ENST00000577541 ATP13A1Q9HD20 1204 aa5.79□□□□□ -1.48
TOP2A-202ENST00000577541 DLG4P78352 724 aa5.78□□□□□ -1.48
TOP2A-202ENST00000577541 ZNF576Q9H609 170 aa5.78□□□□□ -1.48
TOP2A-202ENST00000577541 ZFYVE28Q9HCC9 887 aa5.78□□□□□ -1.48
TOP2A-202ENST00000577541 SEMA3GQ9NS98 782 aa5.78□□□□□ -1.48
TOP2A-202ENST00000577541 CNOT6Q9ULM6 557 aaKnown RBP5.78□□□□□ -1.48
TOP2A-202ENST00000577541 SASH1O94885 1247 aa5.77□□□□□ -1.49
TOP2A-202ENST00000577541 EIF1AXP47813 144 aaKnown RBP5.77□□□□□ -1.49
TOP2A-202ENST00000577541 HNRNPUQ00839 825 aaKnown RBP eCLIP5.77□□□□□ -1.49
TOP2A-202ENST00000577541 ELOAQ14241 798 aaKnown RBP5.77□□□□□ -1.49
TOP2A-202ENST00000577541 ZNF385BQ569K4 471 aa5.77□□□□□ -1.49
TOP2A-202ENST00000577541 ALPK1Q96QP1 1244 aa5.77□□□□□ -1.49
TOP2A-202ENST00000577541 PRDM10Q9NQV6 1147 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms