RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 MCM9Q9NXL9 1143 aa16.36■□□□□ 0.21
ERCC4-207ENST00000575156 LIMCH1Q9UPQ0 1083 aa16.36■□□□□ 0.21
ERCC4-207ENST00000575156 DTNBO60941 627 aa16.35■□□□□ 0.21
ERCC4-207ENST00000575156 HSP90AA1P07900 732 aaKnown RBP16.35■□□□□ 0.21
ERCC4-207ENST00000575156 VIL1P09327 827 aaKnown RBP16.35■□□□□ 0.21
ERCC4-207ENST00000575156 CXCL9Q07325 125 aa16.35■□□□□ 0.21
ERCC4-207ENST00000575156 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
ERCC4-207ENST00000575156 RSBN1LQ6PCB5 846 aaPredicted RBP16.35■□□□□ 0.21
ERCC4-207ENST00000575156 CYB5R4Q7L1T6 521 aa16.35■□□□□ 0.21
ERCC4-207ENST00000575156 SAP30BPQ9UHR5 308 aaKnown RBP16.35■□□□□ 0.21
ERCC4-207ENST00000575156 HHIPL2Q6UWX4 724 aa16.34■□□□□ 0.21
ERCC4-207ENST00000575156 RALYLQ86SE5 291 aaKnown RBP16.34■□□□□ 0.21
ERCC4-207ENST00000575156 STAG1Q8WVM7 1258 aa16.34■□□□□ 0.21
ERCC4-207ENST00000575156 ALDH8A1Q9H2A2 487 aaPredicted RBP16.34■□□□□ 0.21
ERCC4-207ENST00000575156 ANAPC4Q9UJX5 808 aa16.34■□□□□ 0.21
ERCC4-207ENST00000575156 PRC1O43663 620 aa16.34■□□□□ 0.21
ERCC4-207ENST00000575156 CUL4AQ13619 759 aa16.34■□□□□ 0.21
ERCC4-207ENST00000575156 ME3Q16798 604 aa16.34■□□□□ 0.21
ERCC4-207ENST00000575156 RRP12Q5JTH9 1297 aaKnown RBP16.34■□□□□ 0.21
ERCC4-207ENST00000575156 CDC42EP5Q6NZY7 148 aa16.34■□□□□ 0.21
ERCC4-207ENST00000575156 BRF1Q92994 677 aa16.34■□□□□ 0.21
ERCC4-207ENST00000575156 GMLQ99445 158 aa16.34■□□□□ 0.21
ERCC4-207ENST00000575156 TIAM2Q8IVF5 1701 aa16.34■□□□□ 0.21
ERCC4-207ENST00000575156 PLCG2P16885 1265 aa16.33■□□□□ 0.21
ERCC4-207ENST00000575156 RBM5P52756 815 aaKnown RBP eCLIP16.33■□□□□ 0.21
ERCC4-207ENST00000575156 ST3GAL1Q11201 340 aa16.33■□□□□ 0.21
ERCC4-207ENST00000575156 TRDNQ13061 729 aa16.33■□□□□ 0.21
ERCC4-207ENST00000575156 MFSD6Q6ZSS7 791 aa16.33■□□□□ 0.21
ERCC4-207ENST00000575156 NECAB1Q8N987 351 aa16.33■□□□□ 0.21
ERCC4-207ENST00000575156 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.21
ERCC4-207ENST00000575156 DDX4Q9NQI0 724 aaKnown RBP16.33■□□□□ 0.21
ERCC4-207ENST00000575156 USP40Q9NVE5 1235 aa16.33■□□□□ 0.21
ERCC4-207ENST00000575156 FLT1P17948 1338 aa16.33■□□□□ 0.2
ERCC4-207ENST00000575156 LTBP3Q9NS15 1303 aa16.33■□□□□ 0.2
ERCC4-207ENST00000575156 KDM4AO75164 1064 aa16.33■□□□□ 0.2
ERCC4-207ENST00000575156 PRDM1O75626 825 aa16.33■□□□□ 0.2
ERCC4-207ENST00000575156 WDHD1O75717 1129 aaPredicted RBP16.33■□□□□ 0.2
ERCC4-207ENST00000575156 MCM5P33992 734 aa16.33■□□□□ 0.2
ERCC4-207ENST00000575156 SBK1Q52WX2 424 aa16.33■□□□□ 0.2
ERCC4-207ENST00000575156 IL27Q8NEV9 243 aa16.33■□□□□ 0.2
ERCC4-207ENST00000575156 JDP2Q8WYK2 163 aa16.33■□□□□ 0.2
ERCC4-207ENST00000575156 TOMM22Q9NS69 142 aa16.33■□□□□ 0.2
ERCC4-207ENST00000575156 DDIT3P35638 169 aa16.32■□□□□ 0.2
ERCC4-207ENST00000575156 PLCD1P51178 756 aa16.32■□□□□ 0.2
ERCC4-207ENST00000575156 CACNB3P54284 484 aa16.32■□□□□ 0.2
ERCC4-207ENST00000575156 FGD1P98174 961 aa16.32■□□□□ 0.2
ERCC4-207ENST00000575156 APOBRQ0VD83 1088 aa16.32■□□□□ 0.2
ERCC4-207ENST00000575156 PICALMQ13492 652 aa16.32■□□□□ 0.2
ERCC4-207ENST00000575156 ARHGAP27Q6ZUM4 889 aa16.32■□□□□ 0.2
ERCC4-207ENST00000575156 ZSWIM5Q9P217 1185 aa16.32■□□□□ 0.2
ERCC4-207ENST00000575156 ARPP21Q9UBL0 812 aaPredicted RBP16.32■□□□□ 0.2
ERCC4-207ENST00000575156 ARFGEF1Q9Y6D6 1849 aa16.32■□□□□ 0.2
ERCC4-207ENST00000575156 STK3Q13188 491 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 ANKRD1Q15327 319 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 C12orf60Q5U649 245 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 CERS3Q8IU89 383 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 DYNLL2Q96FJ2 89 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 MRIQ9BWK5 157 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 AGXT2Q9BYV1 514 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 SERPINA10Q9UK55 444 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 PSME4Q14997 1843 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 HDLBPQ00341 1268 aaKnown RBP16.31■□□□□ 0.2
ERCC4-207ENST00000575156 NFIAQ12857 509 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 CFAP100Q494V2 611 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 CCDC83Q8IWF9 413 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 SENP2Q9HC62 589 aa16.31■□□□□ 0.2
ERCC4-207ENST00000575156 CDK5RAP2Q96SN8 1893 aa16.3■□□□□ 0.2
ERCC4-207ENST00000575156 SHTN1A0MZ66 631 aa16.3■□□□□ 0.2
ERCC4-207ENST00000575156 CIAPIN1Q6FI81 312 aa16.3■□□□□ 0.2
ERCC4-207ENST00000575156 PRMT6Q96LA8 375 aaPredicted RBP16.3■□□□□ 0.2
ERCC4-207ENST00000575156 ZKSCAN3Q9BRR0 538 aa16.3■□□□□ 0.2
ERCC4-207ENST00000575156 CNNM2Q9H8M5 875 aa16.3■□□□□ 0.2
ERCC4-207ENST00000575156 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
ERCC4-207ENST00000575156 SLC44A5Q8NCS7 719 aa16.3■□□□□ 0.2
ERCC4-207ENST00000575156 KRT23Q9C075 422 aa16.3■□□□□ 0.2
ERCC4-207ENST00000575156 RNF41Q9H4P4 317 aaPredicted RBP16.3■□□□□ 0.2
ERCC4-207ENST00000575156 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
ERCC4-207ENST00000575156 MYO3BQ8WXR4 1341 aa16.29■□□□□ 0.2
ERCC4-207ENST00000575156 POLR3DP05423 398 aaPredicted RBP16.29■□□□□ 0.2
ERCC4-207ENST00000575156 FGRP09769 529 aa16.29■□□□□ 0.2
ERCC4-207ENST00000575156 ZFPM1Q8IX07 1006 aa16.29■□□□□ 0.2
ERCC4-207ENST00000575156 ZSCAN31Q96LW9 406 aaPredicted RBP16.29■□□□□ 0.2
ERCC4-207ENST00000575156 TDRD3Q9H7E2 651 aaKnown RBP16.29■□□□□ 0.2
ERCC4-207ENST00000575156 BRPF3Q9ULD4 1205 aa16.29■□□□□ 0.2
ERCC4-207ENST00000575156 NAV1Q8NEY1 1877 aa16.29■□□□□ 0.2
ERCC4-207ENST00000575156 IGDCC4Q8TDY8 1250 aa16.28■□□□□ 0.2
ERCC4-207ENST00000575156 SH2B1Q9NRF2 756 aaPredicted RBP16.28■□□□□ 0.2
ERCC4-207ENST00000575156 WDR19Q8NEZ3 1342 aa16.28■□□□□ 0.2
ERCC4-207ENST00000575156 DDX60LQ5H9U9 1706 aaKnown RBP16.28■□□□□ 0.2
ERCC4-207ENST00000575156 FZD9O00144 591 aa16.28■□□□□ 0.2
ERCC4-207ENST00000575156 SH2B2O14492 632 aaPredicted RBP16.28■□□□□ 0.2
ERCC4-207ENST00000575156 RAB11FIP4Q86YS3 637 aa16.28■□□□□ 0.2
ERCC4-207ENST00000575156 FBXL16Q8N461 479 aa16.28■□□□□ 0.2
ERCC4-207ENST00000575156 NAP1L2Q9ULW6 460 aaPredicted RBP16.28■□□□□ 0.2
ERCC4-207ENST00000575156 LAMB1P07942 1786 aa16.27■□□□□ 0.2
ERCC4-207ENST00000575156 ZNF541Q9H0D2 1346 aa16.27■□□□□ 0.2
ERCC4-207ENST00000575156 RANBP6O60518 1105 aaKnown RBP16.27■□□□□ 0.2
ERCC4-207ENST00000575156 FAM47AQ5JRC9 791 aa16.27■□□□□ 0.2
ERCC4-207ENST00000575156 AGBL3Q8NEM8 1001 aa16.27■□□□□ 0.2
ERCC4-207ENST00000575156 INTS4Q96HW7 963 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms