RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 ZMYND15Q9H091 742 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 C4AP0C0L4 1744 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 C4BP0C0L5 1744 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 U2AF2P26368 475 aaKnown RBP eCLIP12.97□□□□□ -0.332e-8■□□□□ 9.8
RPAIN-212ENST00000573126 LIFRP42702 1097 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 EIF5P55010 431 aaKnown RBP12.97□□□□□ -0.33
RPAIN-212ENST00000573126 ALX1Q15699 326 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 PDCL2Q8N4E4 241 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 ACSBG1Q96GR2 724 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 BPIFA3Q9BQP9 254 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.97□□□□□ -0.33
RPAIN-212ENST00000573126 SLC4A4Q9Y6R1 1079 aa12.97□□□□□ -0.33
RPAIN-212ENST00000573126 DDX60Q8IY21 1712 aaKnown RBP12.96□□□□□ -0.33
RPAIN-212ENST00000573126 BTBD18B2RXH4 712 aa12.96□□□□□ -0.33
RPAIN-212ENST00000573126 PPP6R2O75170 966 aa12.96□□□□□ -0.33
RPAIN-212ENST00000573126 SSRP1Q08945 709 aaKnown RBP12.96□□□□□ -0.33
RPAIN-212ENST00000573126 PTPN14Q15678 1187 aa12.96□□□□□ -0.33
RPAIN-212ENST00000573126 JMYQ8N9B5 988 aa12.96□□□□□ -0.33
RPAIN-212ENST00000573126 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.33
RPAIN-212ENST00000573126 KCNJ14Q9UNX9 436 aa12.96□□□□□ -0.33
RPAIN-212ENST00000573126 MYH3P11055 1940 aa12.96□□□□□ -0.34
RPAIN-212ENST00000573126 ATP6V1AP38606 617 aa12.96□□□□□ -0.34
RPAIN-212ENST00000573126 CRKLP46109 303 aaKnown RBP12.96□□□□□ -0.34
RPAIN-212ENST00000573126 NCBP1Q09161 790 aaKnown RBP12.96□□□□□ -0.34
RPAIN-212ENST00000573126 INTS5Q6P9B9 1019 aaKnown RBP12.96□□□□□ -0.34
RPAIN-212ENST00000573126 LRP2BPQ9P2M1 347 aa12.96□□□□□ -0.34
RPAIN-212ENST00000573126 HPSEQ9Y251 543 aa12.96□□□□□ -0.34
RPAIN-212ENST00000573126 PAXBP1Q9Y5B6 917 aa12.96□□□□□ -0.34
RPAIN-212ENST00000573126 GSDMDP57764 484 aa12.95□□□□□ -0.34
RPAIN-212ENST00000573126 ANKRD7Q92527 254 aa12.95□□□□□ -0.34
RPAIN-212ENST00000573126 OSBPL5Q9H0X9 879 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-212ENST00000573126 CNNM2Q9H8M5 875 aa12.95□□□□□ -0.34
RPAIN-212ENST00000573126 NUP98P52948 1817 aa12.95□□□□□ -0.34
RPAIN-212ENST00000573126 SMIM22K7EJ46 135 aa12.95□□□□□ -0.34
RPAIN-212ENST00000573126 LONRF3Q496Y0 759 aa12.95□□□□□ -0.34
RPAIN-212ENST00000573126 ARMCX5Q6P1M9 558 aa12.95□□□□□ -0.34
RPAIN-212ENST00000573126 NYAP1Q6ZVC0 841 aa12.95□□□□□ -0.34
RPAIN-212ENST00000573126 CCAR2Q8N163 923 aaKnown RBP12.95□□□□□ -0.34
RPAIN-212ENST00000573126 NACAP1Q9BZK3 213 aa12.95□□□□□ -0.34
RPAIN-212ENST00000573126 CCDC87Q9NVE4 849 aa12.95□□□□□ -0.34
RPAIN-212ENST00000573126 NIP7Q9Y221 180 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPAIN-212ENST00000573126 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-212ENST00000573126 FMNL1O95466 1100 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-212ENST00000573126 IGHMBP2P38935 993 aaKnown RBP12.94□□□□□ -0.34
RPAIN-212ENST00000573126 TPM4P67936 248 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 WTAPQ15007 396 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 CCDC152Q4G0S7 254 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 RESP18Q5W5W9 173 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 NOSTRINQ8IVI9 506 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
RPAIN-212ENST00000573126 NUP133Q8WUM0 1156 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 SDR42E1Q8WUS8 393 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 TIGD1Q96MW7 591 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 KRT23Q9C075 422 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 HSD3B7Q9H2F3 369 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 ABCF2Q9UG63 623 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 KCNH3Q9ULD8 1083 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 FOXN1O15353 648 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 IFNAR1P17181 557 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 FANCCQ00597 558 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 GRIN1Q05586 938 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 RTN1Q16799 776 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 PTPN21Q16825 1174 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 ADGRA1Q86SQ6 560 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 METTL16Q86W50 562 aaKnown RBP12.94□□□□□ -0.34
RPAIN-212ENST00000573126 FOXP4Q8IVH2 680 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-212ENST00000573126 CNNM3Q8NE01 707 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 PRDM10Q9NQV6 1147 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 TUBE1Q9UJT0 475 aa12.94□□□□□ -0.34
RPAIN-212ENST00000573126 ATP2B1P20020 1258 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 SFPQP23246 707 aaKnown RBP eCLIP12.93□□□□□ -0.34
RPAIN-212ENST00000573126 CBX1P83916 185 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 CHRNDQ07001 517 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 NR5A1Q13285 461 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 SART3Q15020 963 aaKnown RBP12.93□□□□□ -0.34
RPAIN-212ENST00000573126 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.93□□□□□ -0.34
RPAIN-212ENST00000573126 IMPACTQ9P2X3 320 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 ANKRD36CQ5JPF3 1778 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 STRCQ7RTU9 1775 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 ERICH2A1L162 156 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 MINDY4BA8MYZ0 360 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 CAMTA2O94983 1202 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 MMP1P03956 469 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 TOB1P50616 345 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-212ENST00000573126 HSP90AA4PQ58FG1 418 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 TRIM22Q8IYM9 498 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 STAG1Q8WVM7 1258 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 AK7Q96M32 723 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 PCDHA5Q9Y5H7 936 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 LRP5O75197 1615 aa12.93□□□□□ -0.34
RPAIN-212ENST00000573126 LOC102724428A0A0B4J2F2 783 aa12.92□□□□□ -0.34
RPAIN-212ENST00000573126 SIK1P57059 783 aa12.92□□□□□ -0.34
RPAIN-212ENST00000573126 SAFBQ15424 915 aaKnown RBP eCLIP12.92□□□□□ -0.34
RPAIN-212ENST00000573126 E4F1Q66K89 784 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-212ENST00000573126 KRI1Q8N9T8 703 aaKnown RBP12.92□□□□□ -0.34
RPAIN-212ENST00000573126 RGS22Q8NE09 1264 aa12.92□□□□□ -0.34
RPAIN-212ENST00000573126 DPF2Q92785 391 aa12.92□□□□□ -0.34
RPAIN-212ENST00000573126 STK36Q9NRP7 1315 aa12.92□□□□□ -0.34
RPAIN-212ENST00000573126 IKBKBO14920 756 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms