RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 SIL1Q9H173 461 aa24.8■■□□□ 1.56
CCDC40-206ENST00000572083 PTPRFP10586 1907 aa24.79■■□□□ 1.56
CCDC40-206ENST00000572083 SGPL1O95470 568 aa24.79■■□□□ 1.56
CCDC40-206ENST00000572083 INHAP05111 366 aa24.79■■□□□ 1.56
CCDC40-206ENST00000572083 SLURP2P0DP57 97 aa24.79■■□□□ 1.56
CCDC40-206ENST00000572083 PTPRAP18433 802 aa24.79■■□□□ 1.56
CCDC40-206ENST00000572083 ATP2B3Q16720 1220 aa24.79■■□□□ 1.56
CCDC40-206ENST00000572083 FASTKD5Q7L8L6 764 aaKnown RBP24.79■■□□□ 1.56
CCDC40-206ENST00000572083 ANP32CO43423 234 aa24.78■■□□□ 1.56
CCDC40-206ENST00000572083 AFG3L2Q9Y4W6 797 aa24.78■■□□□ 1.56
CCDC40-206ENST00000572083 DOCK1Q14185 1865 aa24.78■■□□□ 1.56
CCDC40-206ENST00000572083 MYH2Q9UKX2 1941 aa24.77■■□□□ 1.56
CCDC40-206ENST00000572083 TNPO2O14787 897 aaKnown RBP24.77■■□□□ 1.56
CCDC40-206ENST00000572083 PHKA1P46020 1223 aa24.77■■□□□ 1.56
CCDC40-206ENST00000572083 SH3BP5LQ7L8J4 393 aa24.77■■□□□ 1.56
CCDC40-206ENST00000572083 ZSCAN29Q8IWY8 852 aaPredicted RBP24.77■■□□□ 1.56
CCDC40-206ENST00000572083 SMCR8Q8TEV9 937 aaPredicted RBP24.77■■□□□ 1.56
CCDC40-206ENST00000572083 GNL3LQ9NVN8 582 aaKnown RBP24.77■■□□□ 1.56
CCDC40-206ENST00000572083 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.77■■□□□ 1.56
CCDC40-206ENST00000572083 TAOK2Q9UL54 1235 aa24.77■■□□□ 1.56
CCDC40-206ENST00000572083 SALL1Q9NSC2 1324 aa24.77■■□□□ 1.56
CCDC40-206ENST00000572083 RFX7Q2KHR2 1363 aa24.77■■□□□ 1.56
CCDC40-206ENST00000572083 PHIPQ8WWQ0 1821 aa24.77■■□□□ 1.56
CCDC40-206ENST00000572083 EVI5O60447 810 aa24.76■■□□□ 1.55
CCDC40-206ENST00000572083 SSH1Q8WYL5 1049 aa24.76■■□□□ 1.55
CCDC40-206ENST00000572083 DEFB118Q96PH6 123 aa24.76■■□□□ 1.55
CCDC40-206ENST00000572083 TRIM75PA6NK02 468 aa24.75■■□□□ 1.55
CCDC40-206ENST00000572083 ENTPD3O75355 529 aa24.75■■□□□ 1.55
CCDC40-206ENST00000572083 TFRCP02786 760 aaKnown RBP24.75■■□□□ 1.55
CCDC40-206ENST00000572083 CCDC84Q86UT8 332 aaPredicted RBP24.75■■□□□ 1.55
CCDC40-206ENST00000572083 IDI2Q9BXS1 227 aa24.75■■□□□ 1.55
CCDC40-206ENST00000572083 DENND2AQ9ULE3 1009 aa24.75■■□□□ 1.55
CCDC40-206ENST00000572083 SLC45A1Q9Y2W3 748 aa24.75■■□□□ 1.55
CCDC40-206ENST00000572083 LRRFIP2Q9Y608 721 aaKnown RBP24.75■■□□□ 1.55
CCDC40-206ENST00000572083 ZNF521Q96K83 1311 aa24.75■■□□□ 1.55
CCDC40-206ENST00000572083 DDTLA6NHG4 134 aaPredicted RBP24.74■■□□□ 1.55
CCDC40-206ENST00000572083 SOX1O00570 391 aaPredicted RBP24.74■■□□□ 1.55
CCDC40-206ENST00000572083 PXYLP1Q8TE99 480 aa24.74■■□□□ 1.55
CCDC40-206ENST00000572083 CEP126Q9P2H0 1117 aa24.74■■□□□ 1.55
CCDC40-206ENST00000572083 ALPK3Q96L96 1907 aa24.73■■□□□ 1.55
CCDC40-206ENST00000572083 GAKO14976 1311 aa24.73■■□□□ 1.55
CCDC40-206ENST00000572083 PICALMQ13492 652 aa24.73■■□□□ 1.55
CCDC40-206ENST00000572083 DDX4Q9NQI0 724 aaKnown RBP24.73■■□□□ 1.55
CCDC40-206ENST00000572083 PAK6Q9NQU5 681 aaPredicted RBP24.73■■□□□ 1.55
CCDC40-206ENST00000572083 SEMA3EO15041 775 aa24.72■■□□□ 1.55
CCDC40-206ENST00000572083 ADORA1P30542 326 aa24.72■■□□□ 1.55
CCDC40-206ENST00000572083 IRF5Q13568 498 aa24.72■■□□□ 1.55
CCDC40-206ENST00000572083 DZIP1Q86YF9 867 aaKnown RBP24.72■■□□□ 1.55
CCDC40-206ENST00000572083 ANKRD13CQ8N6S4 541 aa24.72■■□□□ 1.55
CCDC40-206ENST00000572083 SLC17A8Q8NDX2 589 aa24.72■■□□□ 1.55
CCDC40-206ENST00000572083 LRCH3Q96II8 777 aa24.72■■□□□ 1.55
CCDC40-206ENST00000572083 A0A0C4DFX4 3053 aa24.72■■□□□ 1.55
CCDC40-206ENST00000572083 A0A1W2PPC1 479 aa24.71■■□□□ 1.55
CCDC40-206ENST00000572083 CIAO1O76071 339 aa24.71■■□□□ 1.55
CCDC40-206ENST00000572083 MAP3K10Q02779 954 aa24.71■■□□□ 1.55
CCDC40-206ENST00000572083 TREML2Q5T2D2 321 aa24.71■■□□□ 1.55
CCDC40-206ENST00000572083 PAWRQ96IZ0 340 aaKnown RBP24.71■■□□□ 1.55
CCDC40-206ENST00000572083 STAP2Q9UGK3 403 aa24.71■■□□□ 1.55
CCDC40-206ENST00000572083 AGTPBP1Q9UPW5 1226 aa24.71■■□□□ 1.55
CCDC40-206ENST00000572083 CTNND1O60716 968 aaKnown RBP24.7■■□□□ 1.54
CCDC40-206ENST00000572083 CCDC102BQ68D86 513 aa24.7■■□□□ 1.54
CCDC40-206ENST00000572083 ZGPATQ8N5A5 531 aaKnown RBP24.7■■□□□ 1.54
CCDC40-206ENST00000572083 DIS3LQ8TF46 1054 aaKnown RBP24.7■■□□□ 1.54
CCDC40-206ENST00000572083 COA7Q96BR5 231 aa24.7■■□□□ 1.54
CCDC40-206ENST00000572083 ABCF2Q9UG63 623 aa24.7■■□□□ 1.54
CCDC40-206ENST00000572083 FBXO3Q9UK99 471 aa24.7■■□□□ 1.54
CCDC40-206ENST00000572083 PA2G4Q9UQ80 394 aaKnown RBP24.7■■□□□ 1.54
CCDC40-206ENST00000572083 UBTFL1P0CB47 393 aaPredicted RBP24.69■■□□□ 1.54
CCDC40-206ENST00000572083 BTDP43251 543 aa24.69■■□□□ 1.54
CCDC40-206ENST00000572083 RASGRF1Q13972 1273 aa24.69■■□□□ 1.54
CCDC40-206ENST00000572083 FAM196BA6NMK8 535 aa24.68■■□□□ 1.54
CCDC40-206ENST00000572083 DLL1O00548 723 aa24.68■■□□□ 1.54
CCDC40-206ENST00000572083 CRISPLD2Q9H0B8 497 aa24.68■■□□□ 1.54
CCDC40-206ENST00000572083 DOCK3Q8IZD9 2030 aa24.68■■□□□ 1.54
CCDC40-206ENST00000572083 IL15P40933 162 aaPredicted RBP24.67■■□□□ 1.54
CCDC40-206ENST00000572083 FAM110CQ1W6H9 321 aa24.67■■□□□ 1.54
CCDC40-206ENST00000572083 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.67■■□□□ 1.54
CCDC40-206ENST00000572083 LOC285556D6RIA3 1793 aa24.67■■□□□ 1.54
CCDC40-206ENST00000572083 MROH7-TTC4A0A0A0MT08 1334 aa24.66■■□□□ 1.54
CCDC40-206ENST00000572083 SLF2Q8IX21 1173 aa24.66■■□□□ 1.54
CCDC40-206ENST00000572083 PNMA3Q9UL41 463 aa24.66■■□□□ 1.54
CCDC40-206ENST00000572083 CAPN2P17655 700 aa24.65■■□□□ 1.54
CCDC40-206ENST00000572083 NECAB2Q7Z6G3 386 aa24.65■■□□□ 1.54
CCDC40-206ENST00000572083 C7orf61Q8IZ16 206 aa24.65■■□□□ 1.54
CCDC40-206ENST00000572083 SMC4Q9NTJ3 1288 aa24.65■■□□□ 1.54
CCDC40-206ENST00000572083 ATAD5Q96QE3 1844 aa24.64■■□□□ 1.54
CCDC40-206ENST00000572083 E9PSI1 815 aa24.64■■□□□ 1.54
CCDC40-206ENST00000572083 FAM163AQ96GL9 167 aaPredicted RBP24.64■■□□□ 1.54
CCDC40-206ENST00000572083 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.64■■□□□ 1.54
CCDC40-206ENST00000572083 HMGCRP04035 888 aa24.63■■□□□ 1.53
CCDC40-206ENST00000572083 TIMM10P62072 90 aa24.63■■□□□ 1.53
CCDC40-206ENST00000572083 MECOMQ03112 1051 aa24.63■■□□□ 1.53
CCDC40-206ENST00000572083 PROCA1Q8NCQ7 364 aaPredicted RBP24.63■■□□□ 1.53
CCDC40-206ENST00000572083 ZMYND8Q9ULU4 1186 aaPredicted RBP24.63■■□□□ 1.53
CCDC40-206ENST00000572083 PDS5AQ29RF7 1337 aaKnown RBP24.62■■□□□ 1.53
CCDC40-206ENST00000572083 ZBTB22O15209 634 aa24.62■■□□□ 1.53
CCDC40-206ENST00000572083 HMGCS2P54868 508 aa24.62■■□□□ 1.53
CCDC40-206ENST00000572083 RHBDL3P58872 404 aa24.62■■□□□ 1.53
CCDC40-206ENST00000572083 TRIM32Q13049 653 aa24.62■■□□□ 1.53
CCDC40-206ENST00000572083 SPP2Q13103 211 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms