RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 HSPA1LP34931 641 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 IL6STP40189 918 aaPredicted RBP9.23□□□□□ -0.93
SPG7-220ENST00000569363 FANCCQ00597 558 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 DMTNQ08495 405 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 NCAPHQ15003 741 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 PPP2R5BQ15173 497 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 PTPAQ15257 358 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 CT47A1Q5JQC4 288 aaPredicted RBP9.23□□□□□ -0.93
SPG7-220ENST00000569363 KANK3Q6NY19 840 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 TRIM22Q8IYM9 498 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
SPG7-220ENST00000569363 IGDCC4Q8TDY8 1250 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 PIGBQ92521 554 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 ZNF592Q92610 1267 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.23□□□□□ -0.93
SPG7-220ENST00000569363 NBPF3Q9H094 633 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 NAPBQ9H115 298 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 RNF41Q9H4P4 317 aaPredicted RBP9.23□□□□□ -0.93
SPG7-220ENST00000569363 STRN4Q9NRL3 753 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 MORC2Q9Y6X9 1032 aaPredicted RBP9.23□□□□□ -0.93
SPG7-220ENST00000569363 NEDD4P46934 1319 aa9.23□□□□□ -0.93
SPG7-220ENST00000569363 ERICH2A1L162 156 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 GOLGA6L9A6NEM1 432 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 B4E1Z4 1266 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 IFIT3O14879 490 aaKnown RBP9.22□□□□□ -0.93
SPG7-220ENST00000569363 WDHD1O75717 1129 aaPredicted RBP9.22□□□□□ -0.93
SPG7-220ENST00000569363 CYP19A1P11511 503 aaPredicted RBP9.22□□□□□ -0.93
SPG7-220ENST00000569363 FGFR2P21802 821 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 ARID5BQ14865 1188 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 NTRK3Q16288 839 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 RILPL1Q5EBL4 403 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 AKNAD1Q5T1N1 836 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 KRBA2Q6ZNG9 492 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 MFSD6Q6ZSS7 791 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 TRIML1Q8N9V2 468 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 ZNF579Q8NAF0 562 aaKnown RBP9.22□□□□□ -0.93
SPG7-220ENST00000569363 SPATA5Q8NB90 893 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 PKNOX2Q96KN3 472 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 CCDC85AQ96PX6 553 aaPredicted RBP9.22□□□□□ -0.93
SPG7-220ENST00000569363 MAP3K14Q99558 947 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 SRRTQ9BXP5 876 aaKnown RBP9.22□□□□□ -0.93
SPG7-220ENST00000569363 FOXP1Q9H334 677 aaPredicted RBP9.22□□□□□ -0.93
SPG7-220ENST00000569363 LY9Q9HBG7 655 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 SLAIN2Q9P270 581 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 ASAP1Q9ULH1 1129 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 PNPLA7Q6ZV29 1317 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 PHLPP2Q6ZVD8 1323 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 RTL9Q8NET4 1388 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 BCL9O00512 1426 aa9.22□□□□□ -0.93
SPG7-220ENST00000569363 FAM177BA6PVY3 158 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 ZSCAN12O43309 604 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 PPFIA3O75145 1194 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 DEXIO95424 95 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 SERPINC1P01008 464 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 GPTP24298 496 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 MARCKSP29966 332 aaPredicted RBP9.21□□□□□ -0.94
SPG7-220ENST00000569363 PHKA1P46020 1223 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 UBASH3AP57075 661 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 FAM193AP78312 1265 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 CBX1P83916 185 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 GABPB1Q06547 395 aaPredicted RBP9.21□□□□□ -0.94
SPG7-220ENST00000569363 HLFQ16534 295 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 PARP10Q53GL7 1025 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 TMED8Q6PL24 325 aaPredicted RBP9.21□□□□□ -0.94
SPG7-220ENST00000569363 SHC4Q6S5L8 630 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 PI16Q6UXB8 463 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 MICU3Q86XE3 530 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 NOSTRINQ8IVI9 506 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 ZNF34Q8IZ26 560 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 IFNL3Q8IZI9 196 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 MLKLQ8NB16 471 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 CNNM3Q8NE01 707 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 STAG1Q8WVM7 1258 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 FBXW7Q969H0 707 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 PPP1R13BQ96KQ4 1090 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 SLC26A6Q9BXS9 759 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 L2HGDHQ9H9P8 463 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 KCNH3Q9ULD8 1083 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 MROH7-TTC4A0A0A0MT08 1334 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 MYH3P11055 1940 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 AKAP11Q9UKA4 1901 aa9.21□□□□□ -0.94
SPG7-220ENST00000569363 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.2□□□□□ -0.94
SPG7-220ENST00000569363 USP27XA6NNY8 438 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 BIN1O00499 593 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 MBD4O95243 580 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 BMP15O95972 392 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 MMP1P03956 469 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 TPM1P09493 284 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 TOP1P11387 765 aaKnown RBP9.2□□□□□ -0.94
SPG7-220ENST00000569363 XBP1P17861 261 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 CDC27P30260 824 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 WTAPQ15007 396 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 RTN1Q16799 776 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 E4F1Q66K89 784 aaPredicted RBP9.2□□□□□ -0.94
SPG7-220ENST00000569363 ARMCX5Q6P1M9 558 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 DZIP3Q86Y13 1208 aaKnown RBP9.2□□□□□ -0.94
SPG7-220ENST00000569363 RAB11FIP4Q86YS3 637 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 VSTM4Q8IW00 320 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 MPHOSPH8Q99549 860 aa9.2□□□□□ -0.94
SPG7-220ENST00000569363 TRMT1Q9NXH9 659 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms