RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 CCT4P50991 539 aaKnown RBP7.17□□□□□ -1.26
SF3B3-210ENST00000567654 RIPOR1Q6ZS17 1223 aa7.17□□□□□ -1.26
SF3B3-210ENST00000567654 ANKRD44Q8N8A2 993 aa7.17□□□□□ -1.26
SF3B3-210ENST00000567654 PI4KAP1Q8N8J0 262 aa7.17□□□□□ -1.26
SF3B3-210ENST00000567654 RUBCNLQ9H714 662 aa7.17□□□□□ -1.26
SF3B3-210ENST00000567654 SPATA31A5Q5VU36 1347 aa7.17□□□□□ -1.26
SF3B3-210ENST00000567654 SPATA31A7Q8IWB4 1347 aa7.17□□□□□ -1.26
SF3B3-210ENST00000567654 JCADQ9P266 1359 aa7.17□□□□□ -1.26
SF3B3-210ENST00000567654 SERTM1A2A2V5 107 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 EML1O00423 815 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 MYL6BP14649 208 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 MSX1P28360 303 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 WEE1P30291 646 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 PSMA6P60900 246 aaKnown RBP7.16□□□□□ -1.26
SF3B3-210ENST00000567654 NUCB1Q02818 461 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 OCLNQ16625 522 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 SWI5Q1ZZU3 235 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 BEND3Q5T5X7 828 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 DNAAF4Q8WXU2 420 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 FMNL2Q96PY5 1086 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 LNPKQ9C0E8 428 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 USP44Q9H0E7 712 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 DDX21Q9NR30 783 aaKnown RBP eCLIP7.16□□□□□ -1.26
SF3B3-210ENST00000567654 DBF4Q9UBU7 674 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-210ENST00000567654 MAP3K2Q9Y2U5 619 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 BCL9O00512 1426 aa7.16□□□□□ -1.26
SF3B3-210ENST00000567654 DDX60Q8IY21 1712 aaKnown RBP7.15□□□□□ -1.26
SF3B3-210ENST00000567654 LAMB2P55268 1798 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 PNMA6EA0A0J9YXQ4 647 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 SNRPA1P09661 255 aaKnown RBP7.15□□□□□ -1.26
SF3B3-210ENST00000567654 NBPF7P0C2Y1 421 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-210ENST00000567654 ATP4AP20648 1035 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 IGFBP4P22692 258 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 ATP2B4P23634 1241 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 AIMP1Q12904 312 aaKnown RBP7.15□□□□□ -1.26
SF3B3-210ENST00000567654 TEAD4Q15561 434 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 CWF19L2Q2TBE0 894 aaKnown RBP7.15□□□□□ -1.26
SF3B3-210ENST00000567654 TTC5Q8N0Z6 440 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 XAGE3Q8WTP9 111 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 PIGBQ92521 554 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 CLP1Q92989 425 aaKnown RBP7.15□□□□□ -1.26
SF3B3-210ENST00000567654 C2orf49Q9BVC5 232 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-210ENST00000567654 DCTPP1Q9H773 170 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 ATG3Q9NT62 314 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 NXF1Q9UBU9 619 aaKnown RBP7.15□□□□□ -1.26
SF3B3-210ENST00000567654 ASAP1Q9ULH1 1129 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 DYRK1BQ9Y463 629 aa7.15□□□□□ -1.26
SF3B3-210ENST00000567654 LRRFIP2Q9Y608 721 aaKnown RBP7.15□□□□□ -1.26
SF3B3-210ENST00000567654 A0A1B0GUL6 1792 aa7.15□□□□□ -1.27
SF3B3-210ENST00000567654 CDC14CA4D256 554 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 SMARCA5O60264 1052 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-210ENST00000567654 PTCD1O75127 700 aaKnown RBP7.14□□□□□ -1.27
SF3B3-210ENST00000567654 GNAI2P04899 355 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 IGKV5-2P06315 115 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 C4AP0C0L4 1744 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 C4BP0C0L5 1744 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 TAF1P21675 1872 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 ITGA6P23229 1130 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 HSPA1LP34931 641 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 ANKRD45Q5TZF3 282 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 KSR2Q6VAB6 950 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 CHD1LQ86WJ1 897 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 MARCH10Q8NA82 808 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-210ENST00000567654 OTUD7AQ8TE49 926 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-210ENST00000567654 ZNF775Q96BV0 537 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-210ENST00000567654 GCC1Q96CN9 775 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 C8orf37Q96NL8 207 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 PHACTR1Q9C0D0 580 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 SRCIN1Q9C0H9 1055 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 CHMP4BQ9H444 224 aaKnown RBP7.14□□□□□ -1.27
SF3B3-210ENST00000567654 HYPKQ9NX55 129 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 TMOD3Q9NYL9 352 aa7.14□□□□□ -1.27
SF3B3-210ENST00000567654 CXXC1Q9P0U4 656 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-210ENST00000567654 A0A1B0GTH6 734 aa7.13□□□□□ -1.27
SF3B3-210ENST00000567654 EXOC5O00471 708 aa7.13□□□□□ -1.27
SF3B3-210ENST00000567654 A1BGP04217 495 aa7.13□□□□□ -1.27
SF3B3-210ENST00000567654 THBS1P07996 1170 aa7.13□□□□□ -1.27
SF3B3-210ENST00000567654 DBN1Q16643 649 aa7.13□□□□□ -1.27
SF3B3-210ENST00000567654 WDR44Q5JSH3 913 aa7.13□□□□□ -1.27
SF3B3-210ENST00000567654 TTLL7Q6ZT98 887 aa7.13□□□□□ -1.27
SF3B3-210ENST00000567654 COPS6Q7L5N1 327 aa7.13□□□□□ -1.27
SF3B3-210ENST00000567654 UNC5CLQ8IV45 518 aa7.13□□□□□ -1.27
SF3B3-210ENST00000567654 DNAJC10Q8IXB1 793 aa7.13□□□□□ -1.27
SF3B3-210ENST00000567654 RPAP2Q8IXW5 612 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-210ENST00000567654 C16orf71Q8IYS4 520 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-210ENST00000567654 VWA5B2Q8N398 1253 aa7.13□□□□□ -1.27
SF3B3-210ENST00000567654 KAZALD1Q96I82 304 aa7.13□□□□□ -1.27
SF3B3-210ENST00000567654 MYO5AQ9Y4I1 1855 aaKnown RBP7.13□□□□□ -1.27
SF3B3-210ENST00000567654 SCN7AQ01118 1682 aa7.12□□□□□ -1.27
SF3B3-210ENST00000567654 TERTO14746 1132 aaKnown RBP7.12□□□□□ -1.27
SF3B3-210ENST00000567654 F11P03951 625 aa7.12□□□□□ -1.27
SF3B3-210ENST00000567654 GNAI3P08754 354 aa7.12□□□□□ -1.27
SF3B3-210ENST00000567654 UBTFL1P0CB47 393 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-210ENST00000567654 ATP8B2P98198 1209 aa7.12□□□□□ -1.27
SF3B3-210ENST00000567654 NAA30Q147X3 362 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-210ENST00000567654 DDB1Q16531 1140 aa7.12□□□□□ -1.27
SF3B3-210ENST00000567654 ARSJQ5FYB0 599 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-210ENST00000567654 LCE2CQ5TA81 110 aa7.12□□□□□ -1.27
SF3B3-210ENST00000567654 PHLDB3Q6NSJ2 640 aa7.12□□□□□ -1.27
SF3B3-210ENST00000567654 NPM2Q86SE8 214 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms