RNA–Protein interactions for RNA: ENST00000566727.5

NUP93-213, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-213ENST00000566727 AGBL3Q8NEM8 1001 aa9.13□□□□□ -0.95
NUP93-213ENST00000566727 TGFBRAP1Q8WUH2 860 aa9.13□□□□□ -0.95
NUP93-213ENST00000566727 STAG1Q8WVM7 1258 aa9.13□□□□□ -0.95
NUP93-213ENST00000566727 ALDH8A1Q9H2A2 487 aaPredicted RBP9.13□□□□□ -0.95
NUP93-213ENST00000566727 DDX4Q9NQI0 724 aaKnown RBP9.13□□□□□ -0.95
NUP93-213ENST00000566727 INCENPQ9NQS7 918 aa9.13□□□□□ -0.95
NUP93-213ENST00000566727 PDRG1Q9NUG6 133 aa9.13□□□□□ -0.95
NUP93-213ENST00000566727 USP40Q9NVE5 1235 aa9.13□□□□□ -0.95
NUP93-213ENST00000566727 ARPP21Q9UBL0 812 aaPredicted RBP9.13□□□□□ -0.95
NUP93-213ENST00000566727 LAMB1P07942 1786 aa9.13□□□□□ -0.95
NUP93-213ENST00000566727 NAV1Q8NEY1 1877 aa9.13□□□□□ -0.95
NUP93-213ENST00000566727 SHTN1A0MZ66 631 aa9.12□□□□□ -0.95
NUP93-213ENST00000566727 MINDY4BA8MYZ0 360 aa9.12□□□□□ -0.95
NUP93-213ENST00000566727 LMNB1P20700 586 aa9.12□□□□□ -0.95
NUP93-213ENST00000566727 ANTXR2P58335 489 aa9.12□□□□□ -0.95
NUP93-213ENST00000566727 TOB2Q14106 344 aaPredicted RBP9.12□□□□□ -0.95
NUP93-213ENST00000566727 TNIP1Q15025 636 aa9.12□□□□□ -0.95
NUP93-213ENST00000566727 AKNAD1Q5T1N1 836 aa9.12□□□□□ -0.95
NUP93-213ENST00000566727 C12orf60Q5U649 245 aa9.12□□□□□ -0.95
NUP93-213ENST00000566727 CYB5R4Q7L1T6 521 aa9.12□□□□□ -0.95
NUP93-213ENST00000566727 DHX32Q7L7V1 743 aaKnown RBP9.12□□□□□ -0.95
NUP93-213ENST00000566727 IL27Q8NEV9 243 aa9.12□□□□□ -0.95
NUP93-213ENST00000566727 NCOA7Q8NI08 942 aa9.12□□□□□ -0.95
NUP93-213ENST00000566727 ZBED3Q96IU2 234 aaPredicted RBP9.12□□□□□ -0.95
NUP93-213ENST00000566727 DAXXQ9UER7 740 aaPredicted RBP9.12□□□□□ -0.95
NUP93-213ENST00000566727 SAP30BPQ9UHR5 308 aaKnown RBP9.12□□□□□ -0.95
NUP93-213ENST00000566727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
NUP93-213ENST00000566727 ROBO3Q96MS0 1386 aa9.12□□□□□ -0.95
NUP93-213ENST00000566727 CDK5RAP2Q96SN8 1893 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 FOCADQ5VW36 1801 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 SPDYE2BA6NHP3 402 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 B4E1Z4 1266 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 LARGE1O95461 756 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 HMGB1P09429 215 aaKnown RBP9.11□□□□□ -0.95
NUP93-213ENST00000566727 FGRP09769 529 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 SPDYE6P0CI01 402 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 MCM2P49736 904 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 RBM5P52756 815 aaKnown RBP eCLIP9.11□□□□□ -0.95
NUP93-213ENST00000566727 EIF6P56537 245 aaKnown RBP9.11□□□□□ -0.95
NUP93-213ENST00000566727 NFIAQ12857 509 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 SLC4A8Q2Y0W8 1093 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 Q6ZUG5 572 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 NOL8Q76FK4 1167 aaKnown RBP9.11□□□□□ -0.95
NUP93-213ENST00000566727 CHST3Q7LGC8 479 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 STK11IPQ8N1F8 1099 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 MTMR14Q8NCE2 650 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 TMX3Q96JJ7 454 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 PRMT6Q96LA8 375 aaPredicted RBP9.11□□□□□ -0.95
NUP93-213ENST00000566727 LARP6Q9BRS8 491 aaKnown RBP9.11□□□□□ -0.95
NUP93-213ENST00000566727 LRRC2Q9BYS8 371 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 AGXT2Q9BYV1 514 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 TDRD3Q9H7E2 651 aaKnown RBP9.11□□□□□ -0.95
NUP93-213ENST00000566727 MCM9Q9NXL9 1143 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 FAM198AQ9UFP1 575 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 HDAC9Q9UKV0 1011 aa9.11□□□□□ -0.95
NUP93-213ENST00000566727 WDR19Q8NEZ3 1342 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 PRC1O43663 620 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 RPS12P25398 132 aaKnown RBP9.1□□□□□ -0.95
NUP93-213ENST00000566727 GMPSP49915 693 aaPredicted RBP9.1□□□□□ -0.95
NUP93-213ENST00000566727 PLCD1P51178 756 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 CACNB3P54284 484 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 ZNF280AP59817 542 aaPredicted RBP9.1□□□□□ -0.95
NUP93-213ENST00000566727 ST3GAL1Q11201 340 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 PICALMQ13492 652 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 CUL4AQ13619 759 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 MFSD6Q6ZSS7 791 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 RALYLQ86SE5 291 aaKnown RBP9.1□□□□□ -0.95
NUP93-213ENST00000566727 ZFPM1Q8IX07 1006 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 DPF2Q92785 391 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 DYNLL2Q96FJ2 89 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 IDI2Q9BXS1 227 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 KRT23Q9C075 422 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 OSBPL5Q9H0X9 879 aaPredicted RBP9.1□□□□□ -0.95
NUP93-213ENST00000566727 GPHNQ9NQX3 736 aaPredicted RBP9.1□□□□□ -0.95
NUP93-213ENST00000566727 TPCN1Q9ULQ1 816 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 GJA3Q9Y6H8 435 aa9.1□□□□□ -0.95
NUP93-213ENST00000566727 BAZ2AQ9UIF9 1905 aaKnown RBP9.09□□□□□ -0.95
NUP93-213ENST00000566727 ORC4O43929 436 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 KDM4AO75164 1064 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 NPM3O75607 178 aaKnown RBP9.09□□□□□ -0.95
NUP93-213ENST00000566727 EGFRP00533 1210 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 POLR3DP05423 398 aaPredicted RBP9.09□□□□□ -0.95
NUP93-213ENST00000566727 PCP11498 1178 aaKnown RBP9.09□□□□□ -0.95
NUP93-213ENST00000566727 MCM5P33992 734 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 TRDNQ13061 729 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 DLGAP5Q15398 846 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 SPDYE2Q495Y8 402 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 RRP12Q5JTH9 1297 aaKnown RBP9.09□□□□□ -0.95
NUP93-213ENST00000566727 C9orf131Q5VYM1 1079 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 SH3BP5LQ7L8J4 393 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 FBXL16Q8N461 479 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 BRF1Q92994 677 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 RNF41Q9H4P4 317 aaPredicted RBP9.09□□□□□ -0.95
NUP93-213ENST00000566727 CNNM2Q9H8M5 875 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 RNF181Q9P0P0 153 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 ZSWIM5Q9P217 1185 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 ZNF70Q9UC06 446 aaPredicted RBP9.09□□□□□ -0.95
NUP93-213ENST00000566727 LIMCH1Q9UPQ0 1083 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 ECM29Q5VYK3 1845 aa9.09□□□□□ -0.95
NUP93-213ENST00000566727 DICER1Q9UPY3 1922 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms