RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 TAF1LQ8IZX4 1826 aa15.52■□□□□ 0.08
LINC00563-201ENST00000566370 SPTLC2O15270 562 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 NR1I2O75469 434 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 CALM1P0DP23 149 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 CALM2P0DP24 149 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 CALM3P0DP25 149 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 AKAP17AQ02040 695 aaKnown RBP15.51■□□□□ 0.07
LINC00563-201ENST00000566370 RTN1Q16799 776 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 FBXO33Q7Z6M2 555 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 ANO10Q9NW15 660 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 ZSWIM5Q9P217 1185 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 DUOX1Q9NRD9 1551 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 SNAP23O00161 211 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 FMNL1O95466 1100 aaPredicted RBP15.51■□□□□ 0.07
LINC00563-201ENST00000566370 IFNAR1P17181 557 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 KIF23Q02241 960 aaPredicted RBP15.51■□□□□ 0.07
LINC00563-201ENST00000566370 ANO6Q4KMQ2 910 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 IQCA1Q86XH1 822 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 AMOTL1Q8IY63 956 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 CKAP2LQ8IYA6 745 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 CELF1Q92879 486 aaKnown RBP15.51■□□□□ 0.07
LINC00563-201ENST00000566370 FAM84BQ96KN1 310 aaPredicted RBP15.51■□□□□ 0.07
LINC00563-201ENST00000566370 GJD4Q96KN9 370 aaPredicted RBP15.51■□□□□ 0.07
LINC00563-201ENST00000566370 NAP1L5Q96NT1 182 aaPredicted RBP15.51■□□□□ 0.07
LINC00563-201ENST00000566370 NOL10Q9BSC4 688 aaKnown RBP15.51■□□□□ 0.07
LINC00563-201ENST00000566370 BCL2L12Q9HB09 334 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 MRVI1Q9Y6F6 885 aa15.51■□□□□ 0.07
LINC00563-201ENST00000566370 CCDC88AQ3V6T2 1871 aa15.5■□□□□ 0.07
LINC00563-201ENST00000566370 MINDY4BA8MYZ0 360 aa15.5■□□□□ 0.07
LINC00563-201ENST00000566370 DEXIO95424 95 aa15.5■□□□□ 0.07
LINC00563-201ENST00000566370 GSTO1P78417 241 aa15.5■□□□□ 0.07
LINC00563-201ENST00000566370 ANO1Q5XXA6 986 aa15.5■□□□□ 0.07
LINC00563-201ENST00000566370 KRT40Q6A162 431 aa15.5■□□□□ 0.07
LINC00563-201ENST00000566370 CERS3Q8IU89 383 aa15.5■□□□□ 0.07
LINC00563-201ENST00000566370 LINC00301Q8NCQ3 95 aa15.5■□□□□ 0.07
LINC00563-201ENST00000566370 IQSEC3Q9UPP2 1182 aaPredicted RBP15.5■□□□□ 0.07
LINC00563-201ENST00000566370 LEMD3Q9Y2U8 911 aa15.5■□□□□ 0.07
LINC00563-201ENST00000566370 PRKAB2O43741 272 aa15.49■□□□□ 0.07
LINC00563-201ENST00000566370 POLR3DP05423 398 aaPredicted RBP15.49■□□□□ 0.07
LINC00563-201ENST00000566370 ZNF165P49910 485 aa15.49■□□□□ 0.07
LINC00563-201ENST00000566370 TPM4P67936 248 aa15.49■□□□□ 0.07
LINC00563-201ENST00000566370 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.49■□□□□ 0.07
LINC00563-201ENST00000566370 RAB11FIP4Q86YS3 637 aa15.49■□□□□ 0.07
LINC00563-201ENST00000566370 CEP57L1Q8IYX8 460 aa15.49■□□□□ 0.07
LINC00563-201ENST00000566370 CNBD1Q8NA66 436 aa15.49■□□□□ 0.07
LINC00563-201ENST00000566370 ARHGEF1Q92888 912 aaKnown RBP15.49■□□□□ 0.07
LINC00563-201ENST00000566370 SDF4Q9BRK5 362 aa15.49■□□□□ 0.07
LINC00563-201ENST00000566370 SLC26A6Q9BXS9 759 aa15.49■□□□□ 0.07
LINC00563-201ENST00000566370 ATP8A2Q9NTI2 1148 aa15.49■□□□□ 0.07
LINC00563-201ENST00000566370 RBM28Q9NW13 759 aaKnown RBP15.49■□□□□ 0.07
LINC00563-201ENST00000566370 SRP68Q9UHB9 627 aaKnown RBP15.49■□□□□ 0.07
LINC00563-201ENST00000566370 TRPC5Q9UL62 973 aaPredicted RBP15.49■□□□□ 0.07
LINC00563-201ENST00000566370 BECN2A8MW95 431 aa15.48■□□□□ 0.07
LINC00563-201ENST00000566370 PPP6R2O75170 966 aa15.48■□□□□ 0.07
LINC00563-201ENST00000566370 ST5P78524 1137 aa15.48■□□□□ 0.07
LINC00563-201ENST00000566370 CCDC178Q5BJE1 867 aa15.48■□□□□ 0.07
LINC00563-201ENST00000566370 ZNF804AQ7Z570 1209 aa15.48■□□□□ 0.07
LINC00563-201ENST00000566370 CATIPQ7Z7H3 387 aa15.48■□□□□ 0.07
LINC00563-201ENST00000566370 TDRD7Q8NHU6 1098 aaKnown RBP15.48■□□□□ 0.07
LINC00563-201ENST00000566370 WDR66Q8TBY9 1149 aa15.48■□□□□ 0.07
LINC00563-201ENST00000566370 ARPP21Q9UBL0 812 aaPredicted RBP15.48■□□□□ 0.07
LINC00563-201ENST00000566370 PCDHA7Q9UN72 937 aa15.48■□□□□ 0.07
LINC00563-201ENST00000566370 CEP131Q9UPN4 1083 aa15.48■□□□□ 0.07
LINC00563-201ENST00000566370 SBF2Q86WG5 1849 aa15.48■□□□□ 0.07
LINC00563-201ENST00000566370 KIAA1551Q9HCM1 1747 aa15.48■□□□□ 0.07
LINC00563-201ENST00000566370 CACNA1SQ13698 1873 aa15.47■□□□□ 0.07
LINC00563-201ENST00000566370 LDHCP07864 332 aa15.47■□□□□ 0.07
LINC00563-201ENST00000566370 GRAPQ13588 217 aa15.47■□□□□ 0.07
LINC00563-201ENST00000566370 SLC39A14Q15043 492 aa15.47■□□□□ 0.07
LINC00563-201ENST00000566370 C3orf67Q6ZVT6 689 aa15.47■□□□□ 0.07
LINC00563-201ENST00000566370 DZIP1Q86YF9 867 aaKnown RBP15.47■□□□□ 0.07
LINC00563-201ENST00000566370 ZNF654Q8IZM8 581 aa15.47■□□□□ 0.07
LINC00563-201ENST00000566370 GRAPLQ8TC17 118 aaPredicted RBP15.47■□□□□ 0.07
LINC00563-201ENST00000566370 RPGRQ92834 1020 aaKnown RBP15.47■□□□□ 0.07
LINC00563-201ENST00000566370 RIOK1Q9BRS2 568 aaKnown RBP15.47■□□□□ 0.07
LINC00563-201ENST00000566370 BCL11BQ9C0K0 894 aaPredicted RBP15.47■□□□□ 0.07
LINC00563-201ENST00000566370 CBX8Q9HC52 389 aa15.47■□□□□ 0.07
LINC00563-201ENST00000566370 BRMS1Q9HCU9 246 aa15.47■□□□□ 0.07
LINC00563-201ENST00000566370 HOOK1Q9UJC3 728 aaKnown RBP15.47■□□□□ 0.07
LINC00563-201ENST00000566370 ECM29Q5VYK3 1845 aa15.46■□□□□ 0.07
LINC00563-201ENST00000566370 LAMB1P07942 1786 aa15.46■□□□□ 0.07
LINC00563-201ENST00000566370 XDHP47989 1333 aa15.46■□□□□ 0.07
LINC00563-201ENST00000566370 PPFIA3O75145 1194 aa15.46■□□□□ 0.07
LINC00563-201ENST00000566370 CDC27P30260 824 aa15.46■□□□□ 0.07
LINC00563-201ENST00000566370 KCNQ4P56696 695 aa15.46■□□□□ 0.07
LINC00563-201ENST00000566370 PDE4BQ07343 736 aa15.46■□□□□ 0.07
LINC00563-201ENST00000566370 OTUD7BQ6GQQ9 843 aa15.46■□□□□ 0.07
LINC00563-201ENST00000566370 ILDR1Q86SU0 546 aaPredicted RBP15.46■□□□□ 0.07
LINC00563-201ENST00000566370 CCDC144CPQ8IYA2 1237 aa15.46■□□□□ 0.07
LINC00563-201ENST00000566370 CCDC34Q96HJ3 373 aa15.46■□□□□ 0.07
LINC00563-201ENST00000566370 ANKIB1Q9P2G1 1089 aa15.46■□□□□ 0.07
LINC00563-201ENST00000566370 TNKSO95271 1327 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 AFF2P51816 1311 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 OFD1O75665 1012 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 DDAH1O94760 285 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 RXRAP19793 462 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 CMA1P23946 247 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 U2AF2P26368 475 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00563-201ENST00000566370 CHAF1AQ13111 956 aaPredicted RBP15.45■□□□□ 0.06
LINC00563-201ENST00000566370 NTRK3Q16288 839 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms