RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 CNKSR1Q969H4 720 aa7.1□□□□□ -1.27
PTPN9-204ENST00000564970 RPGRIP1Q96KN7 1286 aa7.1□□□□□ -1.27
PTPN9-204ENST00000564970 IRF2BPLQ9H1B7 796 aa7.1□□□□□ -1.27
PTPN9-204ENST00000564970 BICC1Q9H694 974 aaKnown RBP7.1□□□□□ -1.27
PTPN9-204ENST00000564970 GPCPD1Q9NPB8 672 aa7.1□□□□□ -1.27
PTPN9-204ENST00000564970 FOXD4L1Q9NU39 408 aa7.1□□□□□ -1.27
PTPN9-204ENST00000564970 ATP6V0A2Q9Y487 856 aa7.1□□□□□ -1.27
PTPN9-204ENST00000564970 MRFAP1Q9Y605 127 aa7.1□□□□□ -1.27
PTPN9-204ENST00000564970 SLC4A7Q9Y6M7 1214 aa7.1□□□□□ -1.27
PTPN9-204ENST00000564970 KIAA0586Q9BVV6 1533 aa7.1□□□□□ -1.27
PTPN9-204ENST00000564970 WDR46O15213 610 aaKnown RBP7.09□□□□□ -1.27
PTPN9-204ENST00000564970 ZSCAN22P10073 491 aaPredicted RBP7.09□□□□□ -1.27
PTPN9-204ENST00000564970 GHRP10912 638 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 SMARCA1P28370 1054 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 KIF5BP33176 963 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 CCT5P48643 541 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 XRCC4Q13426 336 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 CASP8Q14790 479 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 CNGA3Q16281 694 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 INAQ16352 499 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 NUTM2DQ5VT03 806 aaPredicted RBP7.09□□□□□ -1.27
PTPN9-204ENST00000564970 FOXR1Q6PIV2 292 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 SRGAP1Q7Z6B7 1085 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 PEX5LQ8IYB4 626 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 CCDC155Q8N6L0 562 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 PHC3Q8NDX5 983 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 USP33Q8TEY7 942 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 TEKT4Q8WW24 435 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 IRGQQ8WZA9 623 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 DDX12PQ92771 950 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 GFM2Q969S9 779 aaKnown RBP7.09□□□□□ -1.27
PTPN9-204ENST00000564970 ZNF653Q96CK0 615 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 OPTNQ96CV9 577 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 CDK5RAP3Q96JB5 506 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 UIMC1Q96RL1 719 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 SH3GL1Q99961 368 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 YIPF2Q9BWQ6 316 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 CARD11Q9BXL7 1154 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 CAPS2Q9BXY5 557 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 FAM192AQ9GZU8 254 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 CBX8Q9HC52 389 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 SLC39A2Q9NP94 309 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 DMAP1Q9NPF5 467 aaPredicted RBP7.09□□□□□ -1.27
PTPN9-204ENST00000564970 NOP53Q9NZM5 478 aaKnown RBP7.09□□□□□ -1.27
PTPN9-204ENST00000564970 ZFATQ9P243 1243 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 TFIP11Q9UBB9 837 aaKnown RBP7.09□□□□□ -1.27
PTPN9-204ENST00000564970 C15orf41Q9Y2V0 281 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 STRCQ7RTU9 1775 aa7.09□□□□□ -1.27
PTPN9-204ENST00000564970 KIF24Q5T7B8 1368 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 UBN2Q6ZU65 1347 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 CDHR2Q9BYE9 1310 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 TESPA1A2RU30 521 aaPredicted RBP7.08□□□□□ -1.28
PTPN9-204ENST00000564970 CFAP73A6NFT4 308 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 UNCXA6NJT0 531 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 LRRIQ3A6PVS8 624 aaPredicted RBP7.08□□□□□ -1.28
PTPN9-204ENST00000564970 BECN2A8MW95 431 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 E7ENQ6 273 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 AP5Z1O43299 807 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 CYTH3O43739 400 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 RNF40O75150 1001 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 ATP6V1G1O75348 118 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 MTRF1O75570 445 aaKnown RBP7.08□□□□□ -1.28
PTPN9-204ENST00000564970 PRPF6O94906 941 aaKnown RBP7.08□□□□□ -1.28
PTPN9-204ENST00000564970 SEC31AO94979 1220 aaKnown RBP7.08□□□□□ -1.28
PTPN9-204ENST00000564970 GSTA1P08263 222 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 EPB41P11171 864 aaKnown RBP7.08□□□□□ -1.28
PTPN9-204ENST00000564970 KCNA2P16389 499 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 EIF4BP23588 611 aaKnown RBP7.08□□□□□ -1.28
PTPN9-204ENST00000564970 ALDH3A1P30838 453 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 ZNF165P49910 485 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 IRAK1P51617 712 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 USP11P51784 963 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 RAB15P59190 212 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 TUBA4AP68366 448 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 EIF2B5Q13144 721 aaKnown RBP7.08□□□□□ -1.28
PTPN9-204ENST00000564970 GNL2Q13823 731 aaKnown RBP7.08□□□□□ -1.28
PTPN9-204ENST00000564970 BYSLQ13895 437 aaKnown RBP7.08□□□□□ -1.28
PTPN9-204ENST00000564970 MYBPC3Q14896 1274 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 ZNF394Q53GI3 561 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 PARP10Q53GL7 1025 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 CYB5D1Q6P9G0 228 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 KCTD17Q8N5Z5 321 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 PPP1R14CQ8TAE6 165 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 BCAS4Q8TDM0 211 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 DYDC1Q8WWB3 177 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 NECTIN2Q92692 538 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 DHRS1Q96LJ7 313 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 TTC14Q96N46 770 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 ZMAT2Q96NC0 199 aaKnown RBP7.08□□□□□ -1.28
PTPN9-204ENST00000564970 BPIFA3Q9BQP9 254 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 CARD6Q9BX69 1037 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 SCAND2PQ9GZW5 306 aaPredicted RBP7.08□□□□□ -1.28
PTPN9-204ENST00000564970 NACA2Q9H009 215 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 VCXQ9H320 206 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 GOLPH3LQ9H4A5 285 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 CD248Q9HCU0 757 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 SLC40A1Q9NP59 571 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 ZBTB40Q9NUA8 1239 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 CROTQ9UKG9 612 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 PARP3Q9Y6F1 533 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms