RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 NAA30Q147X3 362 aaPredicted RBP5.6□□□□□ -1.51
SMG1-207ENST00000563235 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.6□□□□□ -1.51
SMG1-207ENST00000563235 OTOP3Q7RTS5 596 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 GALNT5Q7Z7M9 940 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 ELOA2Q8IYF1 753 aaPredicted RBP5.6□□□□□ -1.51
SMG1-207ENST00000563235 CHMP7Q8WUX9 453 aaPredicted RBP5.6□□□□□ -1.51
SMG1-207ENST00000563235 GIMAP1Q8WWP7 306 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 SRRTQ9BXP5 876 aaKnown RBP5.6□□□□□ -1.51
SMG1-207ENST00000563235 PRKRIP1Q9H875 184 aaPredicted RBP5.6□□□□□ -1.51
SMG1-207ENST00000563235 PLEKHA5Q9HAU0 1116 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.6□□□□□ -1.51
SMG1-207ENST00000563235 GRIN2BQ13224 1484 aa5.6□□□□□ -1.51
SMG1-207ENST00000563235 TSPY2A6NKD2 308 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 ALG1L2C9J202 215 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 IRS4O14654 1257 aaPredicted RBP5.59□□□□□ -1.51
SMG1-207ENST00000563235 DKK1O94907 266 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 ASMTLO95671 621 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 TSPY3P0CV98 308 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 TSPY8P0CW00 308 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 MYCLP1P12525 358 aaPredicted RBP5.59□□□□□ -1.51
SMG1-207ENST00000563235 RPL17P18621 184 aaKnown RBP5.59□□□□□ -1.51
SMG1-207ENST00000563235 HPDP32754 393 aaPredicted RBP5.59□□□□□ -1.51
SMG1-207ENST00000563235 NASPP49321 788 aaPredicted RBP5.59□□□□□ -1.51
SMG1-207ENST00000563235 UBXN2AP68543 259 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 TSPY1Q01534 308 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 GALNT17Q6IS24 598 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 OTUD6AQ7L8S5 288 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 STAG2Q8N3U4 1231 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 GABPB2Q8TAK5 448 aaPredicted RBP5.59□□□□□ -1.51
SMG1-207ENST00000563235 FBF1Q8TES7 1133 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 ZNF396Q96N95 335 aaPredicted RBP5.59□□□□□ -1.51
SMG1-207ENST00000563235 ZMAT2Q96NC0 199 aaKnown RBP5.59□□□□□ -1.51
SMG1-207ENST00000563235 SARGQ9BW04 601 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 CSRNP2Q9H175 543 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 ZCCHC17Q9NP64 241 aaKnown RBP5.59□□□□□ -1.51
SMG1-207ENST00000563235 BLOC1S4Q9NUP1 217 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 CCDC87Q9NVE4 849 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 FNIP2Q9P278 1114 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 RAD54L2Q9Y4B4 1467 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 ZBTB24O43167 697 aaPredicted RBP5.59□□□□□ -1.51
SMG1-207ENST00000563235 GFPT2O94808 682 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 CAPN3P20807 821 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 RCAN1P53805 252 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 PIP4K2BP78356 416 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 SWSAP1Q6NVH7 229 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 LLGL2Q6P1M3 1020 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 HS2ST1Q7LGA3 356 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.59□□□□□ -1.51
SMG1-207ENST00000563235 LILRB1Q8NHL6 650 aaPredicted RBP5.59□□□□□ -1.51
SMG1-207ENST00000563235 MGARPQ8TDB4 240 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 PXYLP1Q8TE99 480 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 UPF1Q92900 1129 aaKnown RBP eCLIP5.59□□□□□ -1.51
SMG1-207ENST00000563235 RBSNQ9H1K0 784 aa5.59□□□□□ -1.51
SMG1-207ENST00000563235 WASHC2AQ641Q2 1341 aa5.59□□□□□ -1.52
SMG1-207ENST00000563235 BBOX1O75936 387 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 PURAQ00577 322 aaKnown RBP5.58□□□□□ -1.52
SMG1-207ENST00000563235 DMTNQ08495 405 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 NR6A1Q15406 480 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 NXNQ6DKJ4 435 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 C1orf228Q6PIY5 440 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 IGF2-ASQ6U949 168 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 LHFPL2Q6ZUX7 228 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 TPH2Q8IWU9 490 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 USP33Q8TEY7 942 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 KIFC2Q96AC6 838 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 CFHR5Q9BXR6 569 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 UTP6Q9NYH9 597 aaKnown RBP5.58□□□□□ -1.52
SMG1-207ENST00000563235 GTF3C4Q9UKN8 822 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 USP31Q70CQ4 1352 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 A0A087X0B3 334 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 TRIM64A6NGJ6 449 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 TRIM64BA6NI03 449 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 AKR1B10O60218 316 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 SLC4A1P02730 911 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 EIF4G2P78344 907 aaKnown RBP eCLIP5.58□□□□□ -1.52
SMG1-207ENST00000563235 MAP3K9P80192 1104 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 PDE1CQ14123 709 aaPredicted RBP5.58□□□□□ -1.52
SMG1-207ENST00000563235 GALEQ14376 348 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 HIBCHQ6NVY1 386 aaPredicted RBP5.58□□□□□ -1.52
SMG1-207ENST00000563235 MZT2BQ6NZ67 158 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 SMCR8Q8TEV9 937 aaPredicted RBP5.58□□□□□ -1.52
SMG1-207ENST00000563235 UROC1Q96N76 676 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 RHOBTB2Q9BYZ6 727 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 ADAMTSL3P82987 1691 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 PBRM1Q86U86 1689 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 TYRP1P17643 537 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 PMLP29590 882 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 GALNSP34059 522 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 PFKPQ01813 784 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 PLCB3Q01970 1234 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 PTPN12Q05209 780 aaKnown RBP5.58□□□□□ -1.52
SMG1-207ENST00000563235 SLC20A2Q08357 652 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 SHROOM1Q2M3G4 852 aaPredicted RBP5.58□□□□□ -1.52
SMG1-207ENST00000563235 ATP13A4Q4VNC1 1196 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 C6orf118Q5T5N4 469 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 NFXL1Q6ZNB6 911 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 DAAM2Q86T65 1068 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 SIX5Q8N196 739 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 NFATC2IPQ8NCF5 419 aa5.58□□□□□ -1.52
SMG1-207ENST00000563235 ZBTB10Q96DT7 871 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms