RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 USP48Q86UV5 1035 aa6.17□□□□□ -1.42
LRRC28-222ENST00000561431 ABI1Q8IZP0 508 aa6.17□□□□□ -1.42
LRRC28-222ENST00000561431 SHKBP1Q8TBC3 707 aa6.17□□□□□ -1.42
LRRC28-222ENST00000561431 MYRFLQ96LU7 910 aa6.17□□□□□ -1.42
LRRC28-222ENST00000561431 CBX8Q9HC52 389 aa6.17□□□□□ -1.42
LRRC28-222ENST00000561431 SEC31BQ9NQW1 1179 aa6.17□□□□□ -1.42
LRRC28-222ENST00000561431 KCNK4Q9NYG8 393 aa6.17□□□□□ -1.42
LRRC28-222ENST00000561431 SOX13Q9UN79 622 aa6.17□□□□□ -1.42
LRRC28-222ENST00000561431 SYNJ1O43426 1573 aa6.16□□□□□ -1.42
LRRC28-222ENST00000561431 MINDY4BA8MYZ0 360 aa6.16□□□□□ -1.42
LRRC28-222ENST00000561431 F6X3S4 739 aa6.16□□□□□ -1.42
LRRC28-222ENST00000561431 C8AP07357 584 aa6.16□□□□□ -1.42
LRRC28-222ENST00000561431 GBP2P32456 591 aaPredicted RBP6.16□□□□□ -1.42
LRRC28-222ENST00000561431 GSTM4Q03013 218 aa6.16□□□□□ -1.42
LRRC28-222ENST00000561431 PWP1Q13610 501 aa6.16□□□□□ -1.42
LRRC28-222ENST00000561431 VN1R5Q7Z5H4 357 aa6.16□□□□□ -1.42
LRRC28-222ENST00000561431 NOC4LQ9BVI4 516 aaKnown RBP6.16□□□□□ -1.42
LRRC28-222ENST00000561431 BIVM-ERCC5R4GMW8 1640 aa6.16□□□□□ -1.42
LRRC28-222ENST00000561431 SOGA1O94964 1423 aa6.16□□□□□ -1.42
LRRC28-222ENST00000561431 AQRO60306 1485 aaKnown RBP eCLIP6.15□□□□□ -1.42
LRRC28-222ENST00000561431 TOP2BQ02880 1626 aa6.15□□□□□ -1.42
LRRC28-222ENST00000561431 CELA3AP09093 270 aa6.15□□□□□ -1.42
LRRC28-222ENST00000561431 ESRRAP11474 423 aaPredicted RBP6.15□□□□□ -1.42
LRRC28-222ENST00000561431 CD68P34810 354 aaPredicted RBP6.15□□□□□ -1.42
LRRC28-222ENST00000561431 PIP4K2BP78356 416 aa6.15□□□□□ -1.42
LRRC28-222ENST00000561431 C19orf57Q0VDD7 668 aa6.15□□□□□ -1.42
LRRC28-222ENST00000561431 ZNF423Q2M1K9 1284 aa6.15□□□□□ -1.42
LRRC28-222ENST00000561431 KIAA1211Q6ZU35 1233 aa6.15□□□□□ -1.42
LRRC28-222ENST00000561431 ZNF654Q8IZM8 581 aa6.15□□□□□ -1.42
LRRC28-222ENST00000561431 NECAB3Q96P71 396 aaPredicted RBP6.15□□□□□ -1.42
LRRC28-222ENST00000561431 CARD10Q9BWT7 1032 aa6.15□□□□□ -1.42
LRRC28-222ENST00000561431 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.15□□□□□ -1.42
LRRC28-222ENST00000561431 PCDHGB7Q9Y5F8 929 aa6.15□□□□□ -1.42
LRRC28-222ENST00000561431 ABCA5Q8WWZ7 1642 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 SOX1O00570 391 aaPredicted RBP6.14□□□□□ -1.43
LRRC28-222ENST00000561431 FSCN2O14926 492 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 EIF4EBP3O60516 100 aaPredicted RBP6.14□□□□□ -1.43
LRRC28-222ENST00000561431 B3GALT4O96024 378 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 HOXA10P31260 410 aaPredicted RBP6.14□□□□□ -1.43
LRRC28-222ENST00000561431 FAAP100Q0VG06 881 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 GNL2Q13823 731 aaKnown RBP6.14□□□□□ -1.43
LRRC28-222ENST00000561431 ZNF394Q53GI3 561 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 TTBK2Q6IQ55 1244 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 ADAMTSL4Q6UY14 1074 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 CLEC10AQ8IUN9 316 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 FAM20CQ8IXL6 584 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 POU5F2Q8N7G0 328 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 FAM83CQ9BQN1 747 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 TRIM56Q9BRZ2 755 aaKnown RBP6.14□□□□□ -1.43
LRRC28-222ENST00000561431 IGSF5Q9NSI5 407 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 KBTBD4Q9NVX7 518 aa6.14□□□□□ -1.43
LRRC28-222ENST00000561431 CHD1O14646 1710 aa6.13□□□□□ -1.43
LRRC28-222ENST00000561431 ZC3H6P61129 1189 aaKnown RBP6.13□□□□□ -1.43
LRRC28-222ENST00000561431 HNRNPUQ00839 825 aaKnown RBP eCLIP6.13□□□□□ -1.43
LRRC28-222ENST00000561431 PCNX4Q63HM2 1172 aa6.13□□□□□ -1.43
LRRC28-222ENST00000561431 METTL16Q86W50 562 aaKnown RBP6.13□□□□□ -1.43
LRRC28-222ENST00000561431 SULF2Q8IWU5 870 aa6.13□□□□□ -1.43
LRRC28-222ENST00000561431 CORO1BQ9BR76 489 aa6.13□□□□□ -1.43
LRRC28-222ENST00000561431 USP26Q9BXU7 913 aa6.13□□□□□ -1.43
LRRC28-222ENST00000561431 EMILIN2Q9BXX0 1053 aa6.13□□□□□ -1.43
LRRC28-222ENST00000561431 TGIF2Q9GZN2 237 aa6.13□□□□□ -1.43
LRRC28-222ENST00000561431 CAPN10Q9HC96 672 aa6.13□□□□□ -1.43
LRRC28-222ENST00000561431 COPRSQ9NQ92 184 aa6.13□□□□□ -1.43
LRRC28-222ENST00000561431 INPP5FQ9Y2H2 1132 aa6.13□□□□□ -1.43
LRRC28-222ENST00000561431 ABCA10Q8WWZ4 1543 aa6.13□□□□□ -1.43
LRRC28-222ENST00000561431 ENC1O14682 589 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 PAGE1O75459 146 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 CYP11A1P05108 521 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 NME2P22392 152 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 LIG3P49916 1009 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 NLRP12P59046 1061 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 AP3B2Q13367 1082 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 WRNQ14191 1432 aaPredicted RBP eCLIP6.12□□□□□ -1.43
LRRC28-222ENST00000561431 LRRC14Q15048 493 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 CBLL1Q75N03 491 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 PBRM1Q86U86 1689 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 KLHL23Q8NBE8 558 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 TDRD9Q8NDG6 1382 aaKnown RBP6.12□□□□□ -1.43
LRRC28-222ENST00000561431 ANKRD24Q8TF21 1146 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 KCNB2Q92953 911 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 WNT8BQ93098 351 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 ACSBG1Q96GR2 724 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 TMEM74Q96NL1 305 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 RSRP1Q9BUV0 290 aa6.12□□□□□ -1.43
LRRC28-222ENST00000561431 ZC3H12CQ9C0D7 883 aaKnown RBP6.12□□□□□ -1.43
LRRC28-222ENST00000561431 SNAPC4Q5SXM2 1469 aa6.11□□□□□ -1.43
LRRC28-222ENST00000561431 WDR64B1ANS9 1081 aa6.11□□□□□ -1.43
LRRC28-222ENST00000561431 ARNTP27540 789 aa6.11□□□□□ -1.43
LRRC28-222ENST00000561431 FAM160A1Q05DH4 1040 aa6.11□□□□□ -1.43
LRRC28-222ENST00000561431 PDE3AQ14432 1141 aa6.11□□□□□ -1.43
LRRC28-222ENST00000561431 POU4F3Q15319 338 aa6.11□□□□□ -1.43
LRRC28-222ENST00000561431 SNAP47Q5SQN1 464 aa6.11□□□□□ -1.43
LRRC28-222ENST00000561431 HGSNATQ68CP4 663 aa6.11□□□□□ -1.43
LRRC28-222ENST00000561431 LLGL2Q6P1M3 1020 aa6.11□□□□□ -1.43
LRRC28-222ENST00000561431 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.11□□□□□ -1.43
LRRC28-222ENST00000561431 BEND4Q6ZU67 534 aa6.11□□□□□ -1.43
LRRC28-222ENST00000561431 JARID2Q92833 1246 aaPredicted RBP6.11□□□□□ -1.43
LRRC28-222ENST00000561431 KLHDC7BQ96G42 594 aa6.11□□□□□ -1.43
LRRC28-222ENST00000561431 SPON2Q9BUD6 331 aa6.11□□□□□ -1.43
LRRC28-222ENST00000561431 KRTAP4-11Q9BYQ6 195 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms