RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 NTRK3Q16288 839 aa11.96□□□□□ -0.49
RMDN3-209ENST00000560588 OTUD7BQ6GQQ9 843 aa11.96□□□□□ -0.49
RMDN3-209ENST00000560588 MTERF4Q7Z6M4 381 aaKnown RBP11.96□□□□□ -0.49
RMDN3-209ENST00000560588 ZSWIM5Q9P217 1185 aa11.96□□□□□ -0.49
RMDN3-209ENST00000560588 KIAA1468Q9P260 1216 aa11.96□□□□□ -0.49
RMDN3-209ENST00000560588 FAM177BA6PVY3 158 aa11.96□□□□□ -0.49
RMDN3-209ENST00000560588 NT5C2P49902 561 aa11.96□□□□□ -0.49
RMDN3-209ENST00000560588 CHAF1AQ13111 956 aaPredicted RBP11.96□□□□□ -0.49
RMDN3-209ENST00000560588 CAVIN4Q5BKX8 364 aa11.96□□□□□ -0.49
RMDN3-209ENST00000560588 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
RMDN3-209ENST00000560588 MICU3Q86XE3 530 aa11.96□□□□□ -0.49
RMDN3-209ENST00000560588 VPS37DQ86XT2 251 aa11.96□□□□□ -0.49
RMDN3-209ENST00000560588 ELOA2Q8IYF1 753 aaPredicted RBP11.96□□□□□ -0.49
RMDN3-209ENST00000560588 KCNF1Q9H3M0 494 aa11.96□□□□□ -0.49
RMDN3-209ENST00000560588 CLIP2Q9UDT6 1046 aa11.96□□□□□ -0.49
RMDN3-209ENST00000560588 MAGEB6P1A0A0J9YX57 407 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 SMTNL1A8MU46 457 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 KIF28PB7ZC32 967 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 CUTAO60888 179 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 SLC3A2P08195 630 aaKnown RBP11.95□□□□□ -0.5
RMDN3-209ENST00000560588 CYP7A1P22680 504 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 CDC27P30260 824 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 NDUFA8P51970 172 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 RTN1Q16799 776 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 AXDND1Q5T1B0 1012 aaPredicted RBP11.95□□□□□ -0.5
RMDN3-209ENST00000560588 C11orf57Q6ZUT1 292 aaPredicted RBP11.95□□□□□ -0.5
RMDN3-209ENST00000560588 LCORLQ8N3X6 602 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 MYRIPQ8NFW9 859 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.95□□□□□ -0.5
RMDN3-209ENST00000560588 A0A1B0GVL5 298 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 PTGS1P23219 599 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 NLRP12P59046 1061 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 CTDSPL2Q05D32 466 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 CCDC186Q7Z3E2 898 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 ESR2Q92731 530 aa11.95□□□□□ -0.5
RMDN3-209ENST00000560588 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.95□□□□□ -0.5
RMDN3-209ENST00000560588 FAM217BQ9NTX9 383 aaPredicted RBP11.95□□□□□ -0.5
RMDN3-209ENST00000560588 MORC2Q9Y6X9 1032 aaPredicted RBP11.95□□□□□ -0.5
RMDN3-209ENST00000560588 MYO1BO43795 1136 aa11.94□□□□□ -0.5
RMDN3-209ENST00000560588 ZNF202O95125 648 aa11.94□□□□□ -0.5
RMDN3-209ENST00000560588 DEXIO95424 95 aa11.94□□□□□ -0.5
RMDN3-209ENST00000560588 PPARAQ07869 468 aa11.94□□□□□ -0.5
RMDN3-209ENST00000560588 RAB11FIP4Q86YS3 637 aa11.94□□□□□ -0.5
RMDN3-209ENST00000560588 DHX40Q8IX18 779 aaKnown RBP11.94□□□□□ -0.5
RMDN3-209ENST00000560588 UBAC1Q9BSL1 405 aa11.94□□□□□ -0.5
RMDN3-209ENST00000560588 BRIP1Q9BX63 1249 aa11.94□□□□□ -0.5
RMDN3-209ENST00000560588 SLC26A6Q9BXS9 759 aa11.94□□□□□ -0.5
RMDN3-209ENST00000560588 ANKRD2Q9GZV1 360 aa11.94□□□□□ -0.5
RMDN3-209ENST00000560588 FOXP1Q9H334 677 aaPredicted RBP11.94□□□□□ -0.5
RMDN3-209ENST00000560588 HOOK1Q9UJC3 728 aaKnown RBP11.94□□□□□ -0.5
RMDN3-209ENST00000560588 PFKFB1P16118 471 aa11.94□□□□□ -0.5
RMDN3-209ENST00000560588 GSDMDP57764 484 aa11.94□□□□□ -0.5
RMDN3-209ENST00000560588 HSP90AA2PQ14568 343 aaPredicted RBP11.94□□□□□ -0.5
RMDN3-209ENST00000560588 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
RMDN3-209ENST00000560588 CASZ1Q86V15 1759 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 COL24A1Q17RW2 1714 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 RANBP6O60518 1105 aaKnown RBP11.93□□□□□ -0.5
RMDN3-209ENST00000560588 PPFIA3O75145 1194 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 SYKP43405 635 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 PTPAQ15257 358 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 ERFEQ4G0M1 354 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 RESP18Q5W5W9 173 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 MPNDQ8N594 471 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 MAP3K14Q99558 947 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 IMPACTQ9P2X3 320 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 PYCARDQ9ULZ3 195 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 CEP131Q9UPN4 1083 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 HPSEQ9Y251 543 aa11.93□□□□□ -0.5
RMDN3-209ENST00000560588 CALM1P0DP23 149 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 CALM2P0DP24 149 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 CALM3P0DP25 149 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 XBP1P17861 261 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 GTF2F1P35269 517 aaKnown RBP eCLIP11.92□□□□□ -0.5
RMDN3-209ENST00000560588 VPS72Q15906 364 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 RILPL1Q5EBL4 403 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 NOSTRINQ8IVI9 506 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 LINC00116Q8NCU8 138 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 PHKBQ93100 1093 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 MAST2Q6P0Q8 1798 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 IKBKBO14920 756 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 PRKAB2O43741 272 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 MMP1P03956 469 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 GTF2E1P29083 439 aaPredicted RBP11.92□□□□□ -0.5
RMDN3-209ENST00000560588 FBXO33Q7Z6M2 555 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 CRACR2BQ8N4Y2 399 aaPredicted RBP11.92□□□□□ -0.5
RMDN3-209ENST00000560588 SENP2Q9HC62 589 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 TOMM22Q9NS69 142 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 RBM28Q9NW13 759 aaKnown RBP11.92□□□□□ -0.5
RMDN3-209ENST00000560588 NARFQ9UHQ1 456 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 MINPP1Q9UNW1 487 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 CACNA1SQ13698 1873 aa11.92□□□□□ -0.5
RMDN3-209ENST00000560588 TOM1O60784 492 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 AKAP17AQ02040 695 aaKnown RBP11.91□□□□□ -0.5
RMDN3-209ENST00000560588 RRP12Q5JTH9 1297 aaKnown RBP11.91□□□□□ -0.5
RMDN3-209ENST00000560588 ZNF654Q8IZM8 581 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 AOPEPQ8N6M6 819 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 KRI1Q8N9T8 703 aaKnown RBP11.91□□□□□ -0.5
RMDN3-209ENST00000560588 FANCBQ8NB91 859 aa11.91□□□□□ -0.5
RMDN3-209ENST00000560588 RNF26Q9BY78 433 aaPredicted RBP11.91□□□□□ -0.5
RMDN3-209ENST00000560588 PDCL3Q9H2J4 239 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms