RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 LAMA4Q16363 1823 aa17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 PATL2C9JE40 543 aaKnown RBP17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 PRKAB2O43741 272 aa17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 MYO1BO43795 1136 aa17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 VPS53Q5VIR6 699 aa17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 ANGEL2Q5VTE6 544 aaKnown RBP17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 LDHDQ86WU2 507 aa17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 TEX11Q8IYF3 940 aa17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 RUFY2Q8WXA3 655 aa17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 CRNKL1Q9BZJ0 848 aaKnown RBP17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 ATP8A2Q9NTI2 1148 aa17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 GGA3Q9NZ52 723 aa17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 LAMB1P07942 1786 aa17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 BAZ2AQ9UIF9 1905 aaKnown RBP17.78■□□□□ 0.44
SNRPA1-207ENST00000559309 PAPPA2Q9BXP8 1791 aa17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 CLRN2A0PK11 232 aa17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 HSPD1P10809 573 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 MAP3K10Q02779 954 aa17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 SH3BP5LQ7L8J4 393 aa17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 METTL16Q86W50 562 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 APOBEC3FQ8IUX4 373 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 FAM151AQ8WW52 585 aa17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 NOL10Q9BSC4 688 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 DSCC1Q9BVC3 393 aa17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 LSG1Q9H089 658 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 OSBPL5Q9H0X9 879 aaPredicted RBP17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 PPP2R3BQ9Y5P8 575 aa17.77■□□□□ 0.44
SNRPA1-207ENST00000559309 EPB41L2O43491 1005 aaKnown RBP17.76■□□□□ 0.43
SNRPA1-207ENST00000559309 CACNB3P54284 484 aa17.76■□□□□ 0.43
SNRPA1-207ENST00000559309 MFAP1P55081 439 aaKnown RBP17.76■□□□□ 0.43
SNRPA1-207ENST00000559309 ZFPM1Q8IX07 1006 aa17.76■□□□□ 0.43
SNRPA1-207ENST00000559309 TGFBRAP1Q8WUH2 860 aa17.76■□□□□ 0.43
SNRPA1-207ENST00000559309 SDR42E1Q8WUS8 393 aa17.76■□□□□ 0.43
SNRPA1-207ENST00000559309 SLC4A4Q9Y6R1 1079 aa17.76■□□□□ 0.43
SNRPA1-207ENST00000559309 SSC5DA1L4H1 1573 aa17.75■□□□□ 0.43
SNRPA1-207ENST00000559309 TNFAIP1Q13829 316 aa17.75■□□□□ 0.43
SNRPA1-207ENST00000559309 SBK1Q52WX2 424 aa17.75■□□□□ 0.43
SNRPA1-207ENST00000559309 IFNL3Q8IZI9 196 aa17.75■□□□□ 0.43
SNRPA1-207ENST00000559309 MAP4K1Q92918 833 aa17.75■□□□□ 0.43
SNRPA1-207ENST00000559309 ROBO3Q96MS0 1386 aa17.75■□□□□ 0.43
SNRPA1-207ENST00000559309 ITGBL1O95965 494 aaPredicted RBP17.74■□□□□ 0.43
SNRPA1-207ENST00000559309 PTH1RQ03431 593 aa17.74■□□□□ 0.43
SNRPA1-207ENST00000559309 RASA3Q14644 834 aa17.74■□□□□ 0.43
SNRPA1-207ENST00000559309 COL13A1Q5TAT6 717 aaPredicted RBP17.74■□□□□ 0.43
SNRPA1-207ENST00000559309 DEFB129Q9H1M3 183 aa17.74■□□□□ 0.43
SNRPA1-207ENST00000559309 TMOD2Q9NZR1 351 aa17.74■□□□□ 0.43
SNRPA1-207ENST00000559309 TAOK2Q9UL54 1235 aa17.74■□□□□ 0.43
SNRPA1-207ENST00000559309 DDTLA6NHG4 134 aaPredicted RBP17.73■□□□□ 0.43
SNRPA1-207ENST00000559309 TCP10L2B9ZVM9 353 aa17.73■□□□□ 0.43
SNRPA1-207ENST00000559309 FGAP02671 866 aa17.73■□□□□ 0.43
SNRPA1-207ENST00000559309 EAPPQ56P03 285 aaPredicted RBP17.73■□□□□ 0.43
SNRPA1-207ENST00000559309 CASC1Q6TDU7 716 aa17.73■□□□□ 0.43
SNRPA1-207ENST00000559309 MAPKAPK5Q8IW41 473 aa17.73■□□□□ 0.43
SNRPA1-207ENST00000559309 CDAN1Q8IWY9 1227 aa17.73■□□□□ 0.43
SNRPA1-207ENST00000559309 TNNI2P48788 182 aa17.72■□□□□ 0.43
SNRPA1-207ENST00000559309 GABPAQ06546 454 aa17.72■□□□□ 0.43
SNRPA1-207ENST00000559309 C12orf60Q5U649 245 aa17.72■□□□□ 0.43
SNRPA1-207ENST00000559309 CHADLQ6NUI6 762 aa17.72■□□□□ 0.43
SNRPA1-207ENST00000559309 CTR9Q6PD62 1173 aa17.72■□□□□ 0.43
SNRPA1-207ENST00000559309 CDC37L1Q7L3B6 337 aa17.72■□□□□ 0.43
SNRPA1-207ENST00000559309 DCPSQ96C86 337 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-207ENST00000559309 TMEM39BQ9GZU3 492 aa17.72■□□□□ 0.43
SNRPA1-207ENST00000559309 EHD4Q9H223 541 aa17.72■□□□□ 0.43
SNRPA1-207ENST00000559309 DHX36Q9H2U1 1008 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-207ENST00000559309 VEZTQ9HBM0 779 aa17.72■□□□□ 0.43
SNRPA1-207ENST00000559309 ANAPC4Q9UJX5 808 aa17.72■□□□□ 0.43
SNRPA1-207ENST00000559309 FGRP09769 529 aa17.71■□□□□ 0.43
SNRPA1-207ENST00000559309 KRT26Q7Z3Y9 468 aa17.71■□□□□ 0.43
SNRPA1-207ENST00000559309 ARPP21Q9UBL0 812 aaPredicted RBP17.71■□□□□ 0.43
SNRPA1-207ENST00000559309 PASKQ96RG2 1323 aa17.71■□□□□ 0.42
SNRPA1-207ENST00000559309 ADM5C9JUS6 153 aa17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 TBC1D12O60347 775 aa17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 SEC24BO95487 1268 aa17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 USP5P45974 858 aa17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 PLCD1P51178 756 aa17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 EVX2Q03828 476 aa17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 PICALMQ13492 652 aa17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 NECTIN1Q15223 517 aa17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 MAP1SQ66K74 1059 aaPredicted RBP17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 KCNB2Q92953 911 aa17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 GLIS2Q9BZE0 524 aaPredicted RBP17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 NBPF3Q9H094 633 aa17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 DNAJC18Q9H819 358 aa17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 PALD1Q9ULE6 856 aa17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 SCAF8Q9UPN6 1271 aaKnown RBP17.7■□□□□ 0.42
SNRPA1-207ENST00000559309 TRPM7Q96QT4 1865 aa17.69■□□□□ 0.42
SNRPA1-207ENST00000559309 USP17L12C9JPN9 530 aa17.69■□□□□ 0.42
SNRPA1-207ENST00000559309 USP17L21D6R901 530 aa17.69■□□□□ 0.42
SNRPA1-207ENST00000559309 SMIM22K7EJ46 135 aa17.69■□□□□ 0.42
SNRPA1-207ENST00000559309 TCP10Q12799 353 aa17.69■□□□□ 0.42
SNRPA1-207ENST00000559309 DLK2Q6UY11 383 aa17.69■□□□□ 0.42
SNRPA1-207ENST00000559309 SULF1Q8IWU6 871 aa17.69■□□□□ 0.42
SNRPA1-207ENST00000559309 IL17RAQ96F46 866 aa17.69■□□□□ 0.42
SNRPA1-207ENST00000559309 MCM9Q9NXL9 1143 aa17.69■□□□□ 0.42
SNRPA1-207ENST00000559309 GREB1LQ9C091 1923 aaPredicted RBP17.68■□□□□ 0.42
SNRPA1-207ENST00000559309 NBPF12Q5TAG4 269 aaPredicted RBP17.68■□□□□ 0.42
SNRPA1-207ENST00000559309 USP48Q86UV5 1035 aa17.68■□□□□ 0.42
SNRPA1-207ENST00000559309 USP26Q9BXU7 913 aa17.68■□□□□ 0.42
SNRPA1-207ENST00000559309 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
SNRPA1-207ENST00000559309 TACC3Q9Y6A5 838 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms