RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 PRM3Q9NNZ6 103 aa7.19□□□□□ -1.26
LRRC28-208ENST00000558771 DLG5Q8TDM6 1919 aa7.19□□□□□ -1.26
LRRC28-208ENST00000558771 NBPF20Q3BBV1 942 aa7.18□□□□□ -1.26
LRRC28-208ENST00000558771 INTS6LQ5JSJ4 861 aaKnown RBP7.18□□□□□ -1.26
LRRC28-208ENST00000558771 PPP1R26Q5T8A7 1209 aaPredicted RBP7.18□□□□□ -1.26
LRRC28-208ENST00000558771 DDX46Q7L014 1031 aaKnown RBP7.18□□□□□ -1.26
LRRC28-208ENST00000558771 LRP10Q7Z4F1 713 aa7.18□□□□□ -1.26
LRRC28-208ENST00000558771 PNISRQ8TF01 805 aaKnown RBP7.18□□□□□ -1.26
LRRC28-208ENST00000558771 KIFC2Q96AC6 838 aa7.18□□□□□ -1.26
LRRC28-208ENST00000558771 DCPSQ96C86 337 aaKnown RBP7.18□□□□□ -1.26
LRRC28-208ENST00000558771 TRIM47Q96LD4 638 aa7.18□□□□□ -1.26
LRRC28-208ENST00000558771 PCDHB9Q9Y5E1 797 aa7.18□□□□□ -1.26
LRRC28-208ENST00000558771 ERBB4Q15303 1308 aa7.18□□□□□ -1.26
LRRC28-208ENST00000558771 ANXA1P04083 346 aa7.17□□□□□ -1.26
LRRC28-208ENST00000558771 SNRPBP14678 240 aaKnown RBP7.17□□□□□ -1.26
LRRC28-208ENST00000558771 RPS12P25398 132 aaKnown RBP7.17□□□□□ -1.26
LRRC28-208ENST00000558771 DHX9Q08211 1270 aaKnown RBP7.17□□□□□ -1.26
LRRC28-208ENST00000558771 WASHC4Q2M389 1173 aa7.17□□□□□ -1.26
LRRC28-208ENST00000558771 KIF4BQ2VIQ3 1234 aa7.17□□□□□ -1.26
LRRC28-208ENST00000558771 MRPL14Q6P1L8 145 aaKnown RBP7.17□□□□□ -1.26
LRRC28-208ENST00000558771 RASAL3Q86YV0 1011 aa7.17□□□□□ -1.26
LRRC28-208ENST00000558771 CDCA5Q96FF9 252 aa7.17□□□□□ -1.26
LRRC28-208ENST00000558771 KCNQ5Q9NR82 932 aa7.17□□□□□ -1.26
LRRC28-208ENST00000558771 PGPEP1Q9NXJ5 209 aa7.17□□□□□ -1.26
LRRC28-208ENST00000558771 GGA3Q9NZ52 723 aa7.17□□□□□ -1.26
LRRC28-208ENST00000558771 LRRC37AA6NMS7 1700 aa7.17□□□□□ -1.26
LRRC28-208ENST00000558771 ASTN2O75129 1339 aaPredicted RBP7.17□□□□□ -1.26
LRRC28-208ENST00000558771 RTL9Q8NET4 1388 aa7.17□□□□□ -1.26
LRRC28-208ENST00000558771 HTTP42858 3142 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 ESPNB1AK53 854 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 ECE2O60344 883 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 TBC1D8O95759 1140 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 EIF2S2P20042 333 aaKnown RBP7.16□□□□□ -1.26
LRRC28-208ENST00000558771 PPP2R1AP30153 589 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 MCCD1P59942 119 aaPredicted RBP7.16□□□□□ -1.26
LRRC28-208ENST00000558771 SCARF1Q14162 830 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 PKN2Q16513 984 aaKnown RBP7.16□□□□□ -1.26
LRRC28-208ENST00000558771 PROSER3Q2NL68 480 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 TMC4Q7Z404 712 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 NLRP10Q86W26 655 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 ZNF296Q8WUU4 475 aaPredicted RBP7.16□□□□□ -1.26
LRRC28-208ENST00000558771 ZNF775Q96BV0 537 aaPredicted RBP7.16□□□□□ -1.26
LRRC28-208ENST00000558771 ZFP42Q96MM3 310 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 POLLQ9UGP5 575 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 TRMT112Q9UI30 125 aaKnown RBP7.16□□□□□ -1.26
LRRC28-208ENST00000558771 HDAC9Q9UKV0 1011 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 NSFL1CQ9UNZ2 370 aaKnown RBP7.16□□□□□ -1.26
LRRC28-208ENST00000558771 CENPFP49454 3210 aa7.16□□□□□ -1.26
LRRC28-208ENST00000558771 DDX60Q8IY21 1712 aaKnown RBP7.15□□□□□ -1.26
LRRC28-208ENST00000558771 SCN9AQ15858 1988 aa7.15□□□□□ -1.26
LRRC28-208ENST00000558771 RAB15P59190 212 aa7.15□□□□□ -1.26
LRRC28-208ENST00000558771 GPSM2P81274 684 aa7.15□□□□□ -1.26
LRRC28-208ENST00000558771 AIMP1Q12904 312 aaKnown RBP7.15□□□□□ -1.26
LRRC28-208ENST00000558771 MCM6Q14566 821 aa7.15□□□□□ -1.26
LRRC28-208ENST00000558771 HSP90AB3PQ58FF7 597 aa7.15□□□□□ -1.26
LRRC28-208ENST00000558771 MOB2Q70IA6 237 aa7.15□□□□□ -1.26
LRRC28-208ENST00000558771 COPS6Q7L5N1 327 aa7.15□□□□□ -1.26
LRRC28-208ENST00000558771 CELF1Q92879 486 aaKnown RBP7.15□□□□□ -1.26
LRRC28-208ENST00000558771 ZNF428Q96B54 188 aa7.15□□□□□ -1.26
LRRC28-208ENST00000558771 GCC1Q96CN9 775 aa7.15□□□□□ -1.26
LRRC28-208ENST00000558771 PURBQ96QR8 312 aaKnown RBP7.15□□□□□ -1.26
LRRC28-208ENST00000558771 SH3TC1Q8TE82 1336 aa7.15□□□□□ -1.26
LRRC28-208ENST00000558771 COL4A1P02462 1669 aa7.15□□□□□ -1.27
LRRC28-208ENST00000558771 BRCA2P51587 3418 aa7.15□□□□□ -1.27
LRRC28-208ENST00000558771 PAPPA2Q9BXP8 1791 aa7.15□□□□□ -1.27
LRRC28-208ENST00000558771 ERVH48-1M5A8F1 160 aa7.14□□□□□ -1.27
LRRC28-208ENST00000558771 GPR25O00155 361 aa7.14□□□□□ -1.27
LRRC28-208ENST00000558771 NEFMP07197 916 aa7.14□□□□□ -1.27
LRRC28-208ENST00000558771 VIL1P09327 827 aaKnown RBP7.14□□□□□ -1.27
LRRC28-208ENST00000558771 FKBP1BP68106 108 aa7.14□□□□□ -1.27
LRRC28-208ENST00000558771 TCIRG1Q13488 830 aa7.14□□□□□ -1.27
LRRC28-208ENST00000558771 IRF5Q13568 498 aa7.14□□□□□ -1.27
LRRC28-208ENST00000558771 HABP4Q5JVS0 413 aaKnown RBP7.14□□□□□ -1.27
LRRC28-208ENST00000558771 ANGEL2Q5VTE6 544 aaKnown RBP7.14□□□□□ -1.27
LRRC28-208ENST00000558771 FBXO46Q6PJ61 603 aaPredicted RBP7.14□□□□□ -1.27
LRRC28-208ENST00000558771 MEIOBQ8N635 442 aa7.14□□□□□ -1.27
LRRC28-208ENST00000558771 XAGE3Q8WTP9 111 aa7.14□□□□□ -1.27
LRRC28-208ENST00000558771 EYA3Q99504 573 aa7.14□□□□□ -1.27
LRRC28-208ENST00000558771 GDPD2Q9HCC8 539 aa7.14□□□□□ -1.27
LRRC28-208ENST00000558771 TMPRSS4Q9NRS4 437 aa7.14□□□□□ -1.27
LRRC28-208ENST00000558771 TSPYL4Q9UJ04 414 aa7.14□□□□□ -1.27
LRRC28-208ENST00000558771 TM4SF4P48230 202 aa7.13□□□□□ -1.27
LRRC28-208ENST00000558771 ZNF280AP59817 542 aaPredicted RBP7.13□□□□□ -1.27
LRRC28-208ENST00000558771 CBLBQ13191 982 aa7.13□□□□□ -1.27
LRRC28-208ENST00000558771 SF3B3Q15393 1217 aaKnown RBP7.13□□□□□ -1.27
LRRC28-208ENST00000558771 NFE2L2Q16236 605 aa7.13□□□□□ -1.27
LRRC28-208ENST00000558771 Q6ZVU0 165 aa7.13□□□□□ -1.27
LRRC28-208ENST00000558771 TBC1D16Q8TBP0 767 aa7.13□□□□□ -1.27
LRRC28-208ENST00000558771 ZNF592Q92610 1267 aa7.13□□□□□ -1.27
LRRC28-208ENST00000558771 PLEKHF1Q96S99 279 aa7.13□□□□□ -1.27
LRRC28-208ENST00000558771 SCAF8Q9UPN6 1271 aaKnown RBP7.13□□□□□ -1.27
LRRC28-208ENST00000558771 PITPNM2Q9BZ72 1349 aa7.12□□□□□ -1.27
LRRC28-208ENST00000558771 UBE2Q2LH0YL09 131 aa7.12□□□□□ -1.27
LRRC28-208ENST00000558771 UPP2O95045 317 aa7.12□□□□□ -1.27
LRRC28-208ENST00000558771 ABL2P42684 1182 aa7.12□□□□□ -1.27
LRRC28-208ENST00000558771 NOM1Q5C9Z4 860 aaKnown RBP7.12□□□□□ -1.27
LRRC28-208ENST00000558771 C6orf118Q5T5N4 469 aa7.12□□□□□ -1.27
LRRC28-208ENST00000558771 PRAMEF18Q5VWM3 479 aa7.12□□□□□ -1.27
LRRC28-208ENST00000558771 LINC00528Q8N1L1 170 aa7.12□□□□□ -1.27
LRRC28-208ENST00000558771 AGBL3Q8NEM8 1001 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms