RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 WASHC2CQ9Y4E1 1318 aa9.28□□□□□ -0.92
ZEB1-210ENST00000557827 CCDC163A0A0D9SF12 145 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 RFPL3O75679 317 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 ALDH1L1O75891 902 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 THBS1P07996 1170 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 PMLP29590 882 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 SOX5P35711 763 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 MLLT1Q03111 559 aaPredicted RBP9.27□□□□□ -0.93
ZEB1-210ENST00000557827 NCAPHQ15003 741 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 CT47A1Q5JQC4 288 aaPredicted RBP9.27□□□□□ -0.93
ZEB1-210ENST00000557827 SCARA3Q6AZY7 606 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 VHLLQ6RSH7 139 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 MPRIPQ6WCQ1 1025 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.27□□□□□ -0.93
ZEB1-210ENST00000557827 HFE2Q6ZVN8 426 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 TMEM40Q8WWA1 233 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 MCM8Q9UJA3 840 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 SLC12A7Q9Y666 1083 aa9.27□□□□□ -0.93
ZEB1-210ENST00000557827 PDE8AO60658 829 aa9.26□□□□□ -0.93
ZEB1-210ENST00000557827 RHBDL3P58872 404 aa9.26□□□□□ -0.93
ZEB1-210ENST00000557827 GPLD1P80108 840 aa9.26□□□□□ -0.93
ZEB1-210ENST00000557827 UBAP2LQ14157 1087 aaKnown RBP9.26□□□□□ -0.93
ZEB1-210ENST00000557827 NFE2Q16621 373 aaPredicted RBP9.26□□□□□ -0.93
ZEB1-210ENST00000557827 TMED8Q6PL24 325 aaPredicted RBP9.26□□□□□ -0.93
ZEB1-210ENST00000557827 ADAMTSL4Q6UY14 1074 aa9.26□□□□□ -0.93
ZEB1-210ENST00000557827 WDR75Q8IWA0 830 aaKnown RBP9.26□□□□□ -0.93
ZEB1-210ENST00000557827 LRRC47Q8N1G4 583 aaKnown RBP9.26□□□□□ -0.93
ZEB1-210ENST00000557827 TAB3Q8N5C8 712 aaPredicted RBP9.26□□□□□ -0.93
ZEB1-210ENST00000557827 LTBP3Q9NS15 1303 aa9.26□□□□□ -0.93
ZEB1-210ENST00000557827 EIF3JO75822 258 aaKnown RBP9.25□□□□□ -0.93
ZEB1-210ENST00000557827 PRR20EP86478 221 aa9.25□□□□□ -0.93
ZEB1-210ENST00000557827 PRR20CP86479 221 aa9.25□□□□□ -0.93
ZEB1-210ENST00000557827 PRR20DP86480 221 aa9.25□□□□□ -0.93
ZEB1-210ENST00000557827 PRR20BP86481 221 aa9.25□□□□□ -0.93
ZEB1-210ENST00000557827 PRR20AP86496 221 aa9.25□□□□□ -0.93
ZEB1-210ENST00000557827 SCARF1Q14162 830 aa9.25□□□□□ -0.93
ZEB1-210ENST00000557827 ZYXQ15942 572 aaKnown RBP9.25□□□□□ -0.93
ZEB1-210ENST00000557827 SLC10A6Q3KNW5 377 aa9.25□□□□□ -0.93
ZEB1-210ENST00000557827 UNC5AQ6ZN44 842 aa9.25□□□□□ -0.93
ZEB1-210ENST00000557827 VN1R5Q7Z5H4 357 aa9.25□□□□□ -0.93
ZEB1-210ENST00000557827 RNF180Q86T96 592 aa9.25□□□□□ -0.93
ZEB1-210ENST00000557827 RELTQ969Z4 430 aa9.25□□□□□ -0.93
ZEB1-210ENST00000557827 PRR36Q9H6K5 1346 aa9.25□□□□□ -0.93
ZEB1-210ENST00000557827 IQCA1LA6NCM1 817 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 BNIP3LO60238 219 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 SUSD5O60279 629 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 HTR3BO95264 441 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 ACRP10323 421 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 L1CAMP32004 1257 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 CDK8P49336 464 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 EPHB1P54762 984 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 TTF1Q15361 905 aaPredicted RBP9.24□□□□□ -0.93
ZEB1-210ENST00000557827 AKAP4Q5JQC9 854 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 CEP135Q66GS9 1140 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 INTS3Q68E01 1043 aaKnown RBP9.24□□□□□ -0.93
ZEB1-210ENST00000557827 PDZD3Q86UT5 571 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 SPOCK3Q9BQ16 436 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 EPN3Q9H201 632 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 PCDHB10Q9UN67 800 aa9.24□□□□□ -0.93
ZEB1-210ENST00000557827 SENP3-EIF4A1A0A087X0R7 540 aa9.23□□□□□ -0.93
ZEB1-210ENST00000557827 GFRA2O00451 464 aa9.23□□□□□ -0.93
ZEB1-210ENST00000557827 KIF3BO15066 747 aa9.23□□□□□ -0.93
ZEB1-210ENST00000557827 SMNDC1O75940 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
ZEB1-210ENST00000557827 GHRHP01286 108 aa9.23□□□□□ -0.93
ZEB1-210ENST00000557827 BIRC2Q13490 618 aa9.23□□□□□ -0.93
ZEB1-210ENST00000557827 AXDND1Q5T1B0 1012 aaPredicted RBP9.23□□□□□ -0.93
ZEB1-210ENST00000557827 FOXB2Q5VYV0 432 aa9.23□□□□□ -0.93
ZEB1-210ENST00000557827 MAP1SQ66K74 1059 aaPredicted RBP9.23□□□□□ -0.93
ZEB1-210ENST00000557827 KIF2CQ99661 725 aa9.23□□□□□ -0.93
ZEB1-210ENST00000557827 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
ZEB1-210ENST00000557827 NDFIP2Q9NV92 336 aa9.23□□□□□ -0.93
ZEB1-210ENST00000557827 SOX13Q9UN79 622 aa9.23□□□□□ -0.93
ZEB1-210ENST00000557827 GSG1L2A8MUP6 293 aa9.22□□□□□ -0.93
ZEB1-210ENST00000557827 TSPAN6O43657 245 aa9.22□□□□□ -0.93
ZEB1-210ENST00000557827 RAPGEF3O95398 923 aa9.22□□□□□ -0.93
ZEB1-210ENST00000557827 MAP9Q49MG5 647 aa9.22□□□□□ -0.93
ZEB1-210ENST00000557827 KIAA1211LQ6NV74 962 aa9.22□□□□□ -0.93
ZEB1-210ENST00000557827 RIPOR1Q6ZS17 1223 aa9.22□□□□□ -0.93
ZEB1-210ENST00000557827 ATL2Q8NHH9 583 aa9.22□□□□□ -0.93
ZEB1-210ENST00000557827 KISS1RQ969F8 398 aaPredicted RBP9.22□□□□□ -0.93
ZEB1-210ENST00000557827 ATG4CQ96DT6 458 aa9.22□□□□□ -0.93
ZEB1-210ENST00000557827 PHAXQ9H814 394 aaKnown RBP9.22□□□□□ -0.93
ZEB1-210ENST00000557827 NCOA5Q9HCD5 579 aaKnown RBP9.22□□□□□ -0.93
ZEB1-210ENST00000557827 MAPRE3Q9UPY8 281 aa9.22□□□□□ -0.93
ZEB1-210ENST00000557827 PLD2O14939 933 aa9.21□□□□□ -0.94
ZEB1-210ENST00000557827 ESRRAP11474 423 aaPredicted RBP9.21□□□□□ -0.94
ZEB1-210ENST00000557827 NME1P15531 152 aaKnown RBP9.21□□□□□ -0.94
ZEB1-210ENST00000557827 SELPP16109 830 aa9.21□□□□□ -0.94
ZEB1-210ENST00000557827 CD33P20138 364 aa9.21□□□□□ -0.94
ZEB1-210ENST00000557827 MLECQ14165 292 aa9.21□□□□□ -0.94
ZEB1-210ENST00000557827 FNDC3BQ53EP0 1204 aaKnown RBP9.21□□□□□ -0.94
ZEB1-210ENST00000557827 CCSAPQ6IQ19 270 aaPredicted RBP9.21□□□□□ -0.94
ZEB1-210ENST00000557827 EXOC2Q96KP1 924 aa9.21□□□□□ -0.94
ZEB1-210ENST00000557827 CLUHP3Q96NS8 147 aa9.21□□□□□ -0.94
ZEB1-210ENST00000557827 RPS6KC1Q96S38 1066 aa9.21□□□□□ -0.94
ZEB1-210ENST00000557827 NUCKS1Q9H1E3 243 aaKnown RBP9.21□□□□□ -0.94
ZEB1-210ENST00000557827 IGFLR1Q9H665 355 aa9.21□□□□□ -0.94
ZEB1-210ENST00000557827 GMIPQ9P107 970 aa9.21□□□□□ -0.94
ZEB1-210ENST00000557827 CORINQ9Y5Q5 1042 aa9.21□□□□□ -0.94
ZEB1-210ENST00000557827 SLC22A31A6NKX4 558 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms