RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 TBC1D10CQ8IV04 446 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 TMEM87BQ96K49 555 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 WDR24Q96S15 920 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 PARP4Q9UKK3 1724 aaKnown RBP13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 BMP6P22004 513 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 MDM2Q00987 491 aaPredicted RBP13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 NFXL1Q6ZNB6 911 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 RSRC2Q7L4I2 434 aaKnown RBP13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 TXLNBQ8N3L3 684 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 TC2NQ8N9U0 490 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 MLKLQ8NB16 471 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 RABGGTAQ92696 567 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 ARFGAP3Q9NP61 516 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 MAN1B1Q9UKM7 699 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 GOLGA8AA7E2F4 631 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 ADD2P35612 726 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 POSTNQ15063 836 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 PI16Q6UXB8 463 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 TOGARAM2Q6ZUX3 1019 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 ENOX1Q8TC92 643 aaKnown RBP13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 NFE2L3Q9Y4A8 694 aa13.54□□□□□ -0.24
VIPAS39-211ENST00000557658 C1orf167Q5SNV9 1468 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 APPP05067 770 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 ZNF18P17022 549 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 HNRNPH2P55795 449 aaKnown RBP13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 GPS2Q13227 327 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 NTRK3Q16288 839 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 HSP90AA4PQ58FG1 418 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 JAKMIP3Q5VZ66 844 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 GOLGA1Q92805 767 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 DENND2AQ9ULE3 1009 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 STK36Q9NRP7 1315 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 FOXN1O15353 648 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 SASH3O75995 380 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 OAS2P29728 719 aaKnown RBP13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 ADKP55263 362 aaKnown RBP13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 SSRP1Q08945 709 aaKnown RBP13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 NUTM2AQ8IVF1 878 aaPredicted RBP13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 NOSTRINQ8IVI9 506 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 WASF1Q92558 559 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 SMARCE1Q969G3 411 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 KIFC2Q96AC6 838 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 ISCA1Q9BUE6 129 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 EPC1Q9H2F5 836 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 UBN2Q6ZU65 1347 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 ATRNO75882 1429 aa13.53□□□□□ -0.24
VIPAS39-211ENST00000557658 B4E1Z4 1266 aa13.52□□□□□ -0.24
VIPAS39-211ENST00000557658 RANBP6O60518 1105 aaKnown RBP13.52□□□□□ -0.24
VIPAS39-211ENST00000557658 SMC1AQ14683 1233 aaKnown RBP13.52□□□□□ -0.24
VIPAS39-211ENST00000557658 TTF1Q15361 905 aaPredicted RBP13.52□□□□□ -0.24
VIPAS39-211ENST00000557658 SAFBQ15424 915 aaKnown RBP eCLIP13.52□□□□□ -0.24
VIPAS39-211ENST00000557658 SLC9C2Q5TAH2 1124 aa13.52□□□□□ -0.24
VIPAS39-211ENST00000557658 NT5DC1Q5TFE4 455 aa13.52□□□□□ -0.24
VIPAS39-211ENST00000557658 TRIML1Q8N9V2 468 aa13.52□□□□□ -0.24
VIPAS39-211ENST00000557658 SLC26A6Q9BXS9 759 aa13.52□□□□□ -0.24
VIPAS39-211ENST00000557658 RAI14Q9P0K7 980 aa13.52□□□□□ -0.24
VIPAS39-211ENST00000557658 AKAP11Q9UKA4 1901 aa13.52□□□□□ -0.24
VIPAS39-211ENST00000557658 ZNF142P52746 1687 aaPredicted RBP13.52□□□□□ -0.25
VIPAS39-211ENST00000557658 UBR2Q8IWV8 1755 aa13.52□□□□□ -0.25
VIPAS39-211ENST00000557658 IFIT5Q13325 482 aaKnown RBP13.52□□□□□ -0.25
VIPAS39-211ENST00000557658 TMEM67Q5HYA8 995 aa13.52□□□□□ -0.25
VIPAS39-211ENST00000557658 SGMS1Q86VZ5 419 aa13.52□□□□□ -0.25
VIPAS39-211ENST00000557658 IGDCC4Q8TDY8 1250 aa13.52□□□□□ -0.25
VIPAS39-211ENST00000557658 PARD6BQ9BYG5 372 aa13.52□□□□□ -0.25
VIPAS39-211ENST00000557658 SENP2Q9HC62 589 aa13.52□□□□□ -0.25
VIPAS39-211ENST00000557658 TMEM51Q9NW97 253 aa13.52□□□□□ -0.25
VIPAS39-211ENST00000557658 MCAMP43121 646 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 FMR1Q06787 632 aaKnown RBP eCLIP13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 MORC3Q14149 939 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 UBE3CQ15386 1083 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 STK11IPQ8N1F8 1099 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 NKX2-3Q8TAU0 364 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 CCDC12Q8WUD4 166 aaPredicted RBP13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 DHX58Q96C10 678 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 CCDC85AQ96PX6 553 aaPredicted RBP13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 LY9Q9HBG7 655 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 ADAMTSL3P82987 1691 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 TULP2O00295 520 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 FMNL1O95466 1100 aaPredicted RBP13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 CCDC175P0C221 793 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 TXLNAP40222 546 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 SARSP49591 514 aaKnown RBP13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 TCIRG1Q13488 830 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 METTL24Q5JXM2 366 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 SPECC1Q5M775 1068 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 KANK3Q6NY19 840 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 FAM217BQ9NTX9 383 aaPredicted RBP13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 SERTAD1Q9UHV2 236 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 SLC12A7Q9Y666 1083 aa13.51□□□□□ -0.25
VIPAS39-211ENST00000557658 ZBTB22O15209 634 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 POLR2DO15514 142 aaKnown RBP13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 PTPREP23469 700 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 LIFRP42702 1097 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 NEK11Q8NG66 645 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 CCDC34Q96HJ3 373 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 DESI2Q9BSY9 194 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 FBXO2Q9UK22 296 aaPredicted RBP13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 CCDC151A5D8V7 595 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 AKR1B15C9JRZ8 316 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms