RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 NACAP1Q9BZK3 213 aa16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 OSBPL5Q9H0X9 879 aaPredicted RBP16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 FAM198AQ9UFP1 575 aa16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 ASTN2O75129 1339 aaPredicted RBP16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 ZMYM6O95789 1325 aa16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 LAMB1P07942 1786 aa16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 CNTNAP1P78357 1384 aa16.91■□□□□ 0.3
SUPT16H-208ENST00000557652 TCP10L2B9ZVM9 353 aa16.91■□□□□ 0.3
SUPT16H-208ENST00000557652 DYNLL1P63167 89 aaKnown RBP16.91■□□□□ 0.3
SUPT16H-208ENST00000557652 NMIQ13287 307 aaPredicted RBP16.91■□□□□ 0.3
SUPT16H-208ENST00000557652 TGFBRAP1Q8WUH2 860 aa16.91■□□□□ 0.3
SUPT16H-208ENST00000557652 ARMT1Q9H993 441 aa16.91■□□□□ 0.3
SUPT16H-208ENST00000557652 MKRN1Q9UHC7 482 aaKnown RBP16.91■□□□□ 0.3
SUPT16H-208ENST00000557652 PAPPA2Q9BXP8 1791 aa16.91■□□□□ 0.3
SUPT16H-208ENST00000557652 FLT1P17948 1338 aa16.91■□□□□ 0.3
SUPT16H-208ENST00000557652 CCDC171Q6TFL3 1326 aa16.91■□□□□ 0.3
SUPT16H-208ENST00000557652 PASKQ96RG2 1323 aa16.91■□□□□ 0.3
SUPT16H-208ENST00000557652 A0A0D9SFI3 127 aa16.9■□□□□ 0.3
SUPT16H-208ENST00000557652 PATL2C9JE40 543 aaKnown RBP16.9■□□□□ 0.3
SUPT16H-208ENST00000557652 NFIAQ12857 509 aa16.9■□□□□ 0.3
SUPT16H-208ENST00000557652 DCAF15Q66K64 600 aa16.9■□□□□ 0.3
SUPT16H-208ENST00000557652 TTC6Q86TZ1 520 aa16.9■□□□□ 0.3
SUPT16H-208ENST00000557652 USP48Q86UV5 1035 aa16.9■□□□□ 0.3
SUPT16H-208ENST00000557652 GLIS2Q9BZE0 524 aaPredicted RBP16.9■□□□□ 0.3
SUPT16H-208ENST00000557652 SLC4A4Q9Y6R1 1079 aa16.9■□□□□ 0.3
SUPT16H-208ENST00000557652 M0R2C6 588 aa16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 TBC1D12O60347 775 aa16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 HLA-DOAP06340 250 aa16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 ALX1Q15699 326 aa16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 CWC27Q6UX04 472 aaKnown RBP16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 CDCA5Q96FF9 252 aa16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 FAM227BQ96M60 508 aa16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 TEPSINQ96N21 525 aa16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 EHD4Q9H223 541 aa16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 DCP1AQ9NPI6 582 aaPredicted RBP16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 DDX4Q9NQI0 724 aaKnown RBP16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 PI4KBQ9UBF8 816 aa16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 ARPP21Q9UBL0 812 aaPredicted RBP16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 HERC5Q9UII4 1024 aaKnown RBP16.89■□□□□ 0.29
SUPT16H-208ENST00000557652 PPP1R12BO60237 982 aaPredicted RBP16.88■□□□□ 0.29
SUPT16H-208ENST00000557652 CACNB3P54284 484 aa16.88■□□□□ 0.29
SUPT16H-208ENST00000557652 MAP3K10Q02779 954 aa16.88■□□□□ 0.29
SUPT16H-208ENST00000557652 PICALMQ13492 652 aa16.88■□□□□ 0.29
SUPT16H-208ENST00000557652 SBK1Q52WX2 424 aa16.88■□□□□ 0.29
SUPT16H-208ENST00000557652 FOXP4Q8IVH2 680 aaPredicted RBP16.88■□□□□ 0.29
SUPT16H-208ENST00000557652 DSCC1Q9BVC3 393 aa16.88■□□□□ 0.29
SUPT16H-208ENST00000557652 LAMA4Q16363 1823 aa16.88■□□□□ 0.29
SUPT16H-208ENST00000557652 GSG1L2A8MUP6 293 aa16.87■□□□□ 0.29
SUPT16H-208ENST00000557652 ADM5C9JUS6 153 aa16.87■□□□□ 0.29
SUPT16H-208ENST00000557652 SGSM2O43147 1006 aa16.87■□□□□ 0.29
SUPT16H-208ENST00000557652 EPB41L2O43491 1005 aaKnown RBP16.87■□□□□ 0.29
SUPT16H-208ENST00000557652 NT5C2P49902 561 aa16.87■□□□□ 0.29
SUPT16H-208ENST00000557652 TCP10Q12799 353 aa16.87■□□□□ 0.29
SUPT16H-208ENST00000557652 MAP3K11Q16584 847 aa16.87■□□□□ 0.29
SUPT16H-208ENST00000557652 METTL16Q86W50 562 aaKnown RBP16.87■□□□□ 0.29
SUPT16H-208ENST00000557652 MAPKAPK5Q8IW41 473 aa16.87■□□□□ 0.29
SUPT16H-208ENST00000557652 ZSCAN29Q8IWY8 852 aaPredicted RBP16.87■□□□□ 0.29
SUPT16H-208ENST00000557652 CSRNP1Q96S65 589 aa16.87■□□□□ 0.29
SUPT16H-208ENST00000557652 TMEM39BQ9GZU3 492 aa16.87■□□□□ 0.29
SUPT16H-208ENST00000557652 SIPA1L1O43166 1804 aa16.86■□□□□ 0.29
SUPT16H-208ENST00000557652 CHGBP05060 677 aa16.86■□□□□ 0.29
SUPT16H-208ENST00000557652 SLFNL1Q499Z3 407 aa16.86■□□□□ 0.29
SUPT16H-208ENST00000557652 ARMC9Q7Z3E5 817 aa16.86■□□□□ 0.29
SUPT16H-208ENST00000557652 SKAP1Q86WV1 359 aa16.86■□□□□ 0.29
SUPT16H-208ENST00000557652 SDR42E1Q8WUS8 393 aa16.86■□□□□ 0.29
SUPT16H-208ENST00000557652 SEC62Q99442 399 aaKnown RBP16.86■□□□□ 0.29
SUPT16H-208ENST00000557652 MCM9Q9NXL9 1143 aa16.86■□□□□ 0.29
SUPT16H-208ENST00000557652 CTNNA3Q9UI47 895 aa16.86■□□□□ 0.29
SUPT16H-208ENST00000557652 APPP05067 770 aa16.85■□□□□ 0.29
SUPT16H-208ENST00000557652 POLR3DP05423 398 aaPredicted RBP16.85■□□□□ 0.29
SUPT16H-208ENST00000557652 HSPD1P10809 573 aaKnown RBP16.85■□□□□ 0.29
SUPT16H-208ENST00000557652 IREB2P48200 963 aaKnown RBP16.85■□□□□ 0.29
SUPT16H-208ENST00000557652 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
SUPT16H-208ENST00000557652 IFNL3Q8IZI9 196 aa16.85■□□□□ 0.29
SUPT16H-208ENST00000557652 C2orf69Q8N8R5 385 aa16.85■□□□□ 0.29
SUPT16H-208ENST00000557652 ESYT1Q9BSJ8 1104 aa16.85■□□□□ 0.29
SUPT16H-208ENST00000557652 NAPBQ9H115 298 aa16.85■□□□□ 0.29
SUPT16H-208ENST00000557652 ZNF287Q9HBT7 754 aa16.85■□□□□ 0.29
SUPT16H-208ENST00000557652 GINM1Q9NU53 330 aa16.85■□□□□ 0.29
SUPT16H-208ENST00000557652 SWAP70Q9UH65 585 aa16.85■□□□□ 0.29
SUPT16H-208ENST00000557652 DDTLA6NHG4 134 aaPredicted RBP16.84■□□□□ 0.29
SUPT16H-208ENST00000557652 SLC3A2P08195 630 aaKnown RBP16.84■□□□□ 0.29
SUPT16H-208ENST00000557652 PCP11498 1178 aaKnown RBP16.84■□□□□ 0.29
SUPT16H-208ENST00000557652 TDO2P48775 406 aa16.84■□□□□ 0.29
SUPT16H-208ENST00000557652 NBPF12Q5TAG4 269 aaPredicted RBP16.84■□□□□ 0.29
SUPT16H-208ENST00000557652 ZNF589Q86UQ0 364 aaPredicted RBP16.84■□□□□ 0.29
SUPT16H-208ENST00000557652 HHIPL1Q96JK4 782 aa16.84■□□□□ 0.29
SUPT16H-208ENST00000557652 ZNF341Q9BYN7 854 aa16.84■□□□□ 0.29
SUPT16H-208ENST00000557652 GBA2Q9HCG7 927 aaPredicted RBP16.84■□□□□ 0.29
SUPT16H-208ENST00000557652 SERPINB13Q9UIV8 391 aa16.84■□□□□ 0.29
SUPT16H-208ENST00000557652 ROBO3Q96MS0 1386 aa16.84■□□□□ 0.29
SUPT16H-208ENST00000557652 TMEM88BA6NKF7 163 aa16.83■□□□□ 0.28
SUPT16H-208ENST00000557652 TRAF5O00463 557 aa16.83■□□□□ 0.28
SUPT16H-208ENST00000557652 PRKAB2O43741 272 aa16.83■□□□□ 0.28
SUPT16H-208ENST00000557652 REC8O95072 547 aa16.83■□□□□ 0.28
SUPT16H-208ENST00000557652 CELF2O95319 508 aaKnown RBP16.83■□□□□ 0.28
SUPT16H-208ENST00000557652 APLP1P51693 650 aa16.83■□□□□ 0.28
SUPT16H-208ENST00000557652 C12orf60Q5U649 245 aa16.83■□□□□ 0.28
SUPT16H-208ENST00000557652 SH3BP5LQ7L8J4 393 aa16.83■□□□□ 0.28
SUPT16H-208ENST00000557652 ATAD5Q96QE3 1844 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms