RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 ZSCAN29Q8IWY8 852 aaPredicted RBP21.04■□□□□ 0.96
PSEN1-218ENST00000556864 TGFBRAP1Q8WUH2 860 aa21.04■□□□□ 0.96
PSEN1-218ENST00000556864 OSBP2Q969R2 916 aa21.04■□□□□ 0.96
PSEN1-218ENST00000556864 TMEM39BQ9GZU3 492 aa21.04■□□□□ 0.96
PSEN1-218ENST00000556864 DDX4Q9NQI0 724 aaKnown RBP21.04■□□□□ 0.96
PSEN1-218ENST00000556864 DDX60LQ5H9U9 1706 aaKnown RBP21.04■□□□□ 0.96
PSEN1-218ENST00000556864 M0R2C6 588 aa21.03■□□□□ 0.96
PSEN1-218ENST00000556864 CELF2O95319 508 aaKnown RBP21.03■□□□□ 0.96
PSEN1-218ENST00000556864 MFAP1P55081 439 aaKnown RBP21.03■□□□□ 0.96
PSEN1-218ENST00000556864 C1QTNF8P60827 252 aa21.03■□□□□ 0.96
PSEN1-218ENST00000556864 TRPM7Q96QT4 1865 aa21.03■□□□□ 0.96
PSEN1-218ENST00000556864 RAD50Q92878 1312 aa21.03■□□□□ 0.96
PSEN1-218ENST00000556864 SSC5DA1L4H1 1573 aa21.02■□□□□ 0.96
PSEN1-218ENST00000556864 FKBP1BP68106 108 aa21.02■□□□□ 0.96
PSEN1-218ENST00000556864 NMIQ13287 307 aaPredicted RBP21.02■□□□□ 0.96
PSEN1-218ENST00000556864 DCAF15Q66K64 600 aa21.02■□□□□ 0.96
PSEN1-218ENST00000556864 RUFY2Q8WXA3 655 aa21.02■□□□□ 0.96
PSEN1-218ENST00000556864 TEPSINQ96N21 525 aa21.02■□□□□ 0.96
PSEN1-218ENST00000556864 DHX36Q9H2U1 1008 aaKnown RBP21.02■□□□□ 0.96
PSEN1-218ENST00000556864 ATP8A2Q9NTI2 1148 aa21.02■□□□□ 0.96
PSEN1-218ENST00000556864 GTF3C3Q9Y5Q9 886 aa21.02■□□□□ 0.96
PSEN1-218ENST00000556864 CDK5RAP2Q96SN8 1893 aa21.02■□□□□ 0.96
PSEN1-218ENST00000556864 A0A0D9SFI3 127 aa21.01■□□□□ 0.95
PSEN1-218ENST00000556864 HLA-DOAP06340 250 aa21.01■□□□□ 0.95
PSEN1-218ENST00000556864 APLP1P51693 650 aa21.01■□□□□ 0.95
PSEN1-218ENST00000556864 MCMDC2Q4G0Z9 681 aa21.01■□□□□ 0.95
PSEN1-218ENST00000556864 PRAMEF18Q5VWM3 479 aa21.01■□□□□ 0.95
PSEN1-218ENST00000556864 AMOTL1Q8IY63 956 aa21.01■□□□□ 0.95
PSEN1-218ENST00000556864 FAM227BQ96M60 508 aa21.01■□□□□ 0.95
PSEN1-218ENST00000556864 CSRNP1Q96S65 589 aa21.01■□□□□ 0.95
PSEN1-218ENST00000556864 STRBPQ96SI9 672 aaKnown RBP21.01■□□□□ 0.95
PSEN1-218ENST00000556864 SLC4A4Q9Y6R1 1079 aa21.01■□□□□ 0.95
PSEN1-218ENST00000556864 TMEM88BA6NKF7 163 aa21■□□□□ 0.95
PSEN1-218ENST00000556864 PPP1R12BO60237 982 aaPredicted RBP21■□□□□ 0.95
PSEN1-218ENST00000556864 CASC1Q6TDU7 716 aa21■□□□□ 0.95
PSEN1-218ENST00000556864 C2orf69Q8N8R5 385 aa21■□□□□ 0.95
PSEN1-218ENST00000556864 GBA2Q9HCG7 927 aaPredicted RBP21■□□□□ 0.95
PSEN1-218ENST00000556864 CCDC171Q6TFL3 1326 aa21■□□□□ 0.95
PSEN1-218ENST00000556864 FMR1Q06787 632 aaKnown RBP eCLIP20.99■□□□□ 0.95
PSEN1-218ENST00000556864 TTLL12Q14166 644 aaPredicted RBP20.99■□□□□ 0.95
PSEN1-218ENST00000556864 NBPF12Q5TAG4 269 aaPredicted RBP20.99■□□□□ 0.95
PSEN1-218ENST00000556864 GIMAP6Q6P9H5 292 aa20.99■□□□□ 0.95
PSEN1-218ENST00000556864 DLK2Q6UY11 383 aa20.99■□□□□ 0.95
PSEN1-218ENST00000556864 SDR42E1Q8WUS8 393 aa20.99■□□□□ 0.95
PSEN1-218ENST00000556864 SEC62Q99442 399 aaKnown RBP20.99■□□□□ 0.95
PSEN1-218ENST00000556864 NACAP1Q9BZK3 213 aa20.99■□□□□ 0.95
PSEN1-218ENST00000556864 CWC27Q6UX04 472 aaKnown RBP20.98■□□□□ 0.95
PSEN1-218ENST00000556864 ARMC9Q7Z3E5 817 aa20.98■□□□□ 0.95
PSEN1-218ENST00000556864 ZFPM1Q8IX07 1006 aa20.98■□□□□ 0.95
PSEN1-218ENST00000556864 TRIM34Q9BYJ4 488 aa20.98■□□□□ 0.95
PSEN1-218ENST00000556864 DCP1AQ9NPI6 582 aaPredicted RBP20.98■□□□□ 0.95
PSEN1-218ENST00000556864 CREBZFQ9NS37 354 aa20.98■□□□□ 0.95
PSEN1-218ENST00000556864 SAP30BPQ9UHR5 308 aaKnown RBP20.98■□□□□ 0.95
PSEN1-218ENST00000556864 PRKAB2O43741 272 aa20.97■□□□□ 0.95
PSEN1-218ENST00000556864 CDC45O75419 566 aa20.97■□□□□ 0.95
PSEN1-218ENST00000556864 CHMLP26374 656 aa20.97■□□□□ 0.95
PSEN1-218ENST00000556864 IREB2P48200 963 aaKnown RBP20.97■□□□□ 0.95
PSEN1-218ENST00000556864 TTC6Q86TZ1 520 aa20.97■□□□□ 0.95
PSEN1-218ENST00000556864 CDAN1Q8IWY9 1227 aa20.97■□□□□ 0.95
PSEN1-218ENST00000556864 MCM9Q9NXL9 1143 aa20.97■□□□□ 0.95
PSEN1-218ENST00000556864 ARPP21Q9UBL0 812 aaPredicted RBP20.97■□□□□ 0.95
PSEN1-218ENST00000556864 POLR2AP24928 1970 aaKnown RBP20.96■□□□□ 0.95
PSEN1-218ENST00000556864 DDTLA6NHG4 134 aaPredicted RBP20.96■□□□□ 0.95
PSEN1-218ENST00000556864 APPP05067 770 aa20.96■□□□□ 0.95
PSEN1-218ENST00000556864 POLR3DP05423 398 aaPredicted RBP20.96■□□□□ 0.95
PSEN1-218ENST00000556864 HSPA6P17066 643 aa20.96■□□□□ 0.95
PSEN1-218ENST00000556864 TDO2P48775 406 aa20.96■□□□□ 0.95
PSEN1-218ENST00000556864 CCDC129Q6ZRS4 1044 aa20.96■□□□□ 0.95
PSEN1-218ENST00000556864 SH3BP5LQ7L8J4 393 aa20.96■□□□□ 0.95
PSEN1-218ENST00000556864 ZNF341Q9BYN7 854 aa20.96■□□□□ 0.95
PSEN1-218ENST00000556864 PI4KBQ9UBF8 816 aa20.96■□□□□ 0.95
PSEN1-218ENST00000556864 MKRN1Q9UHC7 482 aaKnown RBP20.96■□□□□ 0.95
PSEN1-218ENST00000556864 HERC5Q9UII4 1024 aaKnown RBP20.96■□□□□ 0.95
PSEN1-218ENST00000556864 TAOK2Q9UL54 1235 aa20.96■□□□□ 0.95
PSEN1-218ENST00000556864 ABT1Q9ULW3 272 aaKnown RBP20.96■□□□□ 0.95
PSEN1-218ENST00000556864 LAMB1P07942 1786 aa20.95■□□□□ 0.94
PSEN1-218ENST00000556864 CST9Q5W186 159 aa20.95■□□□□ 0.94
PSEN1-218ENST00000556864 CRACR2BQ8N4Y2 399 aaPredicted RBP20.95■□□□□ 0.94
PSEN1-218ENST00000556864 NAPBQ9H115 298 aa20.95■□□□□ 0.94
PSEN1-218ENST00000556864 EHD4Q9H223 541 aa20.95■□□□□ 0.94
PSEN1-218ENST00000556864 ANGEL1Q9UNK9 670 aaKnown RBP20.95■□□□□ 0.94
PSEN1-218ENST00000556864 PATL2C9JE40 543 aaKnown RBP20.94■□□□□ 0.94
PSEN1-218ENST00000556864 MAP3K11Q16584 847 aa20.94■□□□□ 0.94
PSEN1-218ENST00000556864 ZNF589Q86UQ0 364 aaPredicted RBP20.94■□□□□ 0.94
PSEN1-218ENST00000556864 PALD1Q9ULE6 856 aa20.94■□□□□ 0.94
PSEN1-218ENST00000556864 TLL2Q9Y6L7 1015 aa20.94■□□□□ 0.94
PSEN1-218ENST00000556864 MYH1P12882 1939 aa20.94■□□□□ 0.94
PSEN1-218ENST00000556864 UNCXA6NJT0 531 aa20.93■□□□□ 0.94
PSEN1-218ENST00000556864 GSG1L2A8MUP6 293 aa20.93■□□□□ 0.94
PSEN1-218ENST00000556864 TBC1D12O60347 775 aa20.93■□□□□ 0.94
PSEN1-218ENST00000556864 PRKG1Q13976 671 aa20.93■□□□□ 0.94
PSEN1-218ENST00000556864 EPB41L4AQ9HCS5 686 aaPredicted RBP20.93■□□□□ 0.94
PSEN1-218ENST00000556864 ZMYM6O95789 1325 aa20.93■□□□□ 0.94
PSEN1-218ENST00000556864 HUNKP57058 714 aa20.92■□□□□ 0.94
PSEN1-218ENST00000556864 FOXP4Q8IVH2 680 aaPredicted RBP20.92■□□□□ 0.94
PSEN1-218ENST00000556864 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.92■□□□□ 0.94
PSEN1-218ENST00000556864 SERPINB13Q9UIV8 391 aa20.92■□□□□ 0.94
PSEN1-218ENST00000556864 SIPA1L1O43166 1804 aa20.92■□□□□ 0.94
PSEN1-218ENST00000556864 SLC4A8Q2Y0W8 1093 aa20.91■□□□□ 0.94
PSEN1-218ENST00000556864 SBK1Q52WX2 424 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms