RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 GOLGA8AA7E2F4 631 aa17.24■□□□□ 0.35
XRCC3-211ENST00000555055 ZBTB43O43298 467 aa17.24■□□□□ 0.35
XRCC3-211ENST00000555055 PRDX5P30044 214 aa17.24■□□□□ 0.35
XRCC3-211ENST00000555055 CAVIN4Q5BKX8 364 aa17.24■□□□□ 0.35
XRCC3-211ENST00000555055 C17orf53Q8N3J3 647 aaPredicted RBP17.24■□□□□ 0.35
XRCC3-211ENST00000555055 NUP133Q8WUM0 1156 aa17.24■□□□□ 0.35
XRCC3-211ENST00000555055 ALG1Q9BT22 464 aa17.24■□□□□ 0.35
XRCC3-211ENST00000555055 FAM217BQ9NTX9 383 aaPredicted RBP17.24■□□□□ 0.35
XRCC3-211ENST00000555055 hCG_1642624A0A1W2PR95 340 aa17.24■□□□□ 0.35
XRCC3-211ENST00000555055 MARCKSP29966 332 aaPredicted RBP17.24■□□□□ 0.35
XRCC3-211ENST00000555055 FBXL16Q8N461 479 aa17.24■□□□□ 0.35
XRCC3-211ENST00000555055 CLSTN2Q9H4D0 955 aa17.24■□□□□ 0.35
XRCC3-211ENST00000555055 PCDHA7Q9UN72 937 aa17.24■□□□□ 0.35
XRCC3-211ENST00000555055 MAGEB6P1A0A0J9YX57 407 aa17.23■□□□□ 0.35
XRCC3-211ENST00000555055 SLC26A6Q9BXS9 759 aa17.23■□□□□ 0.35
XRCC3-211ENST00000555055 RCOR1Q9UKL0 485 aa17.23■□□□□ 0.35
XRCC3-211ENST00000555055 BTAF1O14981 1849 aa17.23■□□□□ 0.35
XRCC3-211ENST00000555055 ARAP2Q8WZ64 1704 aa17.23■□□□□ 0.35
XRCC3-211ENST00000555055 ZMYM6O95789 1325 aa17.23■□□□□ 0.35
XRCC3-211ENST00000555055 RTL9Q8NET4 1388 aa17.23■□□□□ 0.35
XRCC3-211ENST00000555055 FSIP1Q8NA03 581 aa17.23■□□□□ 0.35
XRCC3-211ENST00000555055 AATFQ9NY61 560 aaKnown RBP eCLIP17.23■□□□□ 0.35
XRCC3-211ENST00000555055 SLC12A7Q9Y666 1083 aa17.23■□□□□ 0.35
XRCC3-211ENST00000555055 BCORQ6W2J9 1755 aa17.22■□□□□ 0.35
XRCC3-211ENST00000555055 DHX16O60231 1041 aaKnown RBP17.22■□□□□ 0.35
XRCC3-211ENST00000555055 RFC4P35249 363 aa17.22■□□□□ 0.35
XRCC3-211ENST00000555055 PPARAQ07869 468 aa17.22■□□□□ 0.35
XRCC3-211ENST00000555055 NFIXQ14938 502 aa17.22■□□□□ 0.35
XRCC3-211ENST00000555055 FEZ1Q99689 392 aa17.22■□□□□ 0.35
XRCC3-211ENST00000555055 ZNF804BA4D1E1 1349 aa17.22■□□□□ 0.35
XRCC3-211ENST00000555055 CCDC69A6NI79 296 aa17.22■□□□□ 0.35
XRCC3-211ENST00000555055 SNW1Q13573 536 aaKnown RBP17.22■□□□□ 0.35
XRCC3-211ENST00000555055 PPP4R3BQ5MIZ7 849 aa17.22■□□□□ 0.35
XRCC3-211ENST00000555055 PDCL2Q8N4E4 241 aa17.22■□□□□ 0.35
XRCC3-211ENST00000555055 GJD4Q96KN9 370 aaPredicted RBP17.22■□□□□ 0.35
XRCC3-211ENST00000555055 NACAP1Q9BZK3 213 aa17.22■□□□□ 0.35
XRCC3-211ENST00000555055 CICQ96RK0 1608 aaPredicted RBP17.21■□□□□ 0.35
XRCC3-211ENST00000555055 KIF23Q02241 960 aaPredicted RBP17.21■□□□□ 0.35
XRCC3-211ENST00000555055 UBE4AQ14139 1066 aa17.21■□□□□ 0.35
XRCC3-211ENST00000555055 TPTE2Q6XPS3 522 aa17.21■□□□□ 0.35
XRCC3-211ENST00000555055 CBX8Q9HC52 389 aa17.21■□□□□ 0.35
XRCC3-211ENST00000555055 BAZ2AQ9UIF9 1905 aaKnown RBP17.21■□□□□ 0.35
XRCC3-211ENST00000555055 AFF2P51816 1311 aa17.21■□□□□ 0.35
XRCC3-211ENST00000555055 CASZ1Q86V15 1759 aa17.21■□□□□ 0.35
XRCC3-211ENST00000555055 HSPA1LP34931 641 aa17.21■□□□□ 0.35
XRCC3-211ENST00000555055 STK38Q15208 465 aa17.21■□□□□ 0.35
XRCC3-211ENST00000555055 SF3A1Q15459 793 aaKnown RBP17.21■□□□□ 0.35
XRCC3-211ENST00000555055 NTRK3Q16288 839 aa17.21■□□□□ 0.35
XRCC3-211ENST00000555055 MYSM1Q5VVJ2 828 aa17.21■□□□□ 0.35
XRCC3-211ENST00000555055 KRT40Q6A162 431 aa17.21■□□□□ 0.35
XRCC3-211ENST00000555055 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
XRCC3-211ENST00000555055 RIOK1Q9BRS2 568 aaKnown RBP17.21■□□□□ 0.35
XRCC3-211ENST00000555055 KCNF1Q9H3M0 494 aa17.21■□□□□ 0.35
XRCC3-211ENST00000555055 DDX19AQ9NUU7 478 aaKnown RBP17.21■□□□□ 0.35
XRCC3-211ENST00000555055 GNL3LQ9NVN8 582 aaKnown RBP17.21■□□□□ 0.35
XRCC3-211ENST00000555055 KCNJ14Q9UNX9 436 aa17.21■□□□□ 0.35
XRCC3-211ENST00000555055 BAZ2BQ9UIF8 2168 aaKnown RBP17.2■□□□□ 0.34
XRCC3-211ENST00000555055 DOCK2Q92608 1830 aa17.2■□□□□ 0.34
XRCC3-211ENST00000555055 NMT2O60551 498 aa17.2■□□□□ 0.34
XRCC3-211ENST00000555055 TM4SF1P30408 202 aa17.2■□□□□ 0.34
XRCC3-211ENST00000555055 IARSP41252 1262 aaKnown RBP17.2■□□□□ 0.34
XRCC3-211ENST00000555055 NDUFA8P51970 172 aa17.2■□□□□ 0.34
XRCC3-211ENST00000555055 MECOMQ03112 1051 aa17.2■□□□□ 0.34
XRCC3-211ENST00000555055 ALX1Q15699 326 aa17.2■□□□□ 0.34
XRCC3-211ENST00000555055 C11orf57Q6ZUT1 292 aaPredicted RBP17.2■□□□□ 0.34
XRCC3-211ENST00000555055 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
XRCC3-211ENST00000555055 LINC00301Q8NCQ3 95 aa17.2■□□□□ 0.34
XRCC3-211ENST00000555055 PRDM10Q9NQV6 1147 aa17.2■□□□□ 0.34
XRCC3-211ENST00000555055 ANKIB1Q9P2G1 1089 aa17.2■□□□□ 0.34
XRCC3-211ENST00000555055 CYP2D6P10635 497 aa17.19■□□□□ 0.34
XRCC3-211ENST00000555055 GNL2Q13823 731 aaKnown RBP17.19■□□□□ 0.34
XRCC3-211ENST00000555055 TMEM87BQ96K49 555 aa17.19■□□□□ 0.34
XRCC3-211ENST00000555055 WTAPQ15007 396 aa17.19■□□□□ 0.34
XRCC3-211ENST00000555055 GRIK5Q16478 980 aa17.19■□□□□ 0.34
XRCC3-211ENST00000555055 TRAPPC3LQ5T215 181 aa17.19■□□□□ 0.34
XRCC3-211ENST00000555055 FAM200AQ8TCP9 573 aa17.19■□□□□ 0.34
XRCC3-211ENST00000555055 PNPLA7Q6ZV29 1317 aa17.19■□□□□ 0.34
XRCC3-211ENST00000555055 C4AP0C0L4 1744 aa17.18■□□□□ 0.34
XRCC3-211ENST00000555055 C4BP0C0L5 1744 aa17.18■□□□□ 0.34
XRCC3-211ENST00000555055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.18■□□□□ 0.34
XRCC3-211ENST00000555055 HIBADHP31937 336 aaKnown RBP17.18■□□□□ 0.34
XRCC3-211ENST00000555055 SLC10A5Q5PT55 438 aa17.18■□□□□ 0.34
XRCC3-211ENST00000555055 ISM2Q6H9L7 571 aa17.18■□□□□ 0.34
XRCC3-211ENST00000555055 CCDC73Q6ZRK6 1079 aa17.18■□□□□ 0.34
XRCC3-211ENST00000555055 STAG1Q8WVM7 1258 aa17.18■□□□□ 0.34
XRCC3-211ENST00000555055 MYH15Q9Y2K3 1946 aa17.18■□□□□ 0.34
XRCC3-211ENST00000555055 USP17L12C9JPN9 530 aa17.18■□□□□ 0.34
XRCC3-211ENST00000555055 USP17L21D6R901 530 aa17.18■□□□□ 0.34
XRCC3-211ENST00000555055 RIOK3O14730 519 aaKnown RBP17.18■□□□□ 0.34
XRCC3-211ENST00000555055 ATP2B1P20020 1258 aa17.18■□□□□ 0.34
XRCC3-211ENST00000555055 NYXQ9GZU5 481 aa17.18■□□□□ 0.34
XRCC3-211ENST00000555055 LAMB2P55268 1798 aa17.18■□□□□ 0.34
XRCC3-211ENST00000555055 WDHD1O75717 1129 aaPredicted RBP17.17■□□□□ 0.34
XRCC3-211ENST00000555055 TNKSO95271 1327 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 FAM47AQ5JRC9 791 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 SPECC1Q5M775 1068 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 SYNE3Q6ZMZ3 975 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 NSUN4Q96CB9 384 aaKnown RBP17.17■□□□□ 0.34
XRCC3-211ENST00000555055 PYCARDQ9ULZ3 195 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 CHD4Q14839 1912 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms