RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 DIXDC1Q155Q3 683 aa16.57■□□□□ 0.24
TUBB3-207ENST00000554927 GPR153Q6NV75 609 aa16.57■□□□□ 0.24
TUBB3-207ENST00000554927 PRRT2Q7Z6L0 340 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-207ENST00000554927 SCYL3Q8IZE3 742 aa16.57■□□□□ 0.24
TUBB3-207ENST00000554927 CRISPLD2Q9H0B8 497 aa16.57■□□□□ 0.24
TUBB3-207ENST00000554927 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.57■□□□□ 0.248e-7■■■■□ 24.2
TUBB3-207ENST00000554927 STXBP5LQ9Y2K9 1186 aa16.57■□□□□ 0.24
TUBB3-207ENST00000554927 NBPF7P0C2Y1 421 aaPredicted RBP16.56■□□□□ 0.24
TUBB3-207ENST00000554927 SYN1P17600 705 aa16.56■□□□□ 0.24
TUBB3-207ENST00000554927 PTPRAP18433 802 aa16.56■□□□□ 0.24
TUBB3-207ENST00000554927 PUM3Q15397 648 aaKnown RBP16.56■□□□□ 0.24
TUBB3-207ENST00000554927 ANKRD13CQ8N6S4 541 aa16.56■□□□□ 0.24
TUBB3-207ENST00000554927 VGLL2Q8N8G2 317 aa16.56■□□□□ 0.24
TUBB3-207ENST00000554927 KAZALD1Q96I82 304 aa16.56■□□□□ 0.24
TUBB3-207ENST00000554927 FAM198AQ9UFP1 575 aa16.56■□□□□ 0.24
TUBB3-207ENST00000554927 LRRFIP2Q9Y608 721 aaKnown RBP16.56■□□□□ 0.24
TUBB3-207ENST00000554927 TRIM75PA6NK02 468 aa16.55■□□□□ 0.24
TUBB3-207ENST00000554927 ZSCAN29Q8IWY8 852 aaPredicted RBP16.55■□□□□ 0.24
TUBB3-207ENST00000554927 ZFPM1Q8IX07 1006 aa16.55■□□□□ 0.24
TUBB3-207ENST00000554927 KLHDC4Q8TBB5 520 aa16.55■□□□□ 0.24
TUBB3-207ENST00000554927 SLC45A1Q9Y2W3 748 aa16.55■□□□□ 0.24
TUBB3-207ENST00000554927 AK9Q5TCS8 1911 aa16.55■□□□□ 0.24
TUBB3-207ENST00000554927 MGAMO43451 1857 aa16.54■□□□□ 0.24
TUBB3-207ENST00000554927 LDHBP07195 334 aaKnown RBP16.54■□□□□ 0.24
TUBB3-207ENST00000554927 SLC5A1P13866 664 aa16.54■□□□□ 0.24
TUBB3-207ENST00000554927 MAGEA10P43363 369 aaPredicted RBP16.54■□□□□ 0.24
TUBB3-207ENST00000554927 ANKLE1Q8NAG6 615 aa16.54■□□□□ 0.24
TUBB3-207ENST00000554927 NBPF3Q9H094 633 aa16.54■□□□□ 0.24
TUBB3-207ENST00000554927 AFG3L2Q9Y4W6 797 aa16.54■□□□□ 0.24
TUBB3-207ENST00000554927 CACNA1FO60840 1977 aa16.53■□□□□ 0.24
TUBB3-207ENST00000554927 KIF16BQ96L93 1317 aa16.53■□□□□ 0.24
TUBB3-207ENST00000554927 PHF20L1A8MW92 1017 aa16.53■□□□□ 0.24
TUBB3-207ENST00000554927 PRDX5P30044 214 aa16.53■□□□□ 0.24
TUBB3-207ENST00000554927 LRIT3Q3SXY7 679 aa16.53■□□□□ 0.24
TUBB3-207ENST00000554927 TDHQ8IZJ6 230 aa16.53■□□□□ 0.24
TUBB3-207ENST00000554927 ANKRD44Q8N8A2 993 aa16.53■□□□□ 0.24
TUBB3-207ENST00000554927 UBE2OQ9C0C9 1292 aaKnown RBP16.53■□□□□ 0.24
TUBB3-207ENST00000554927 C11orf49Q9H6J7 331 aa16.53■□□□□ 0.24
TUBB3-207ENST00000554927 MTMR10Q9NXD2 777 aa16.53■□□□□ 0.24
TUBB3-207ENST00000554927 LAMA3Q16787 3333 aa16.53■□□□□ 0.24
TUBB3-207ENST00000554927 HMGCRP04035 888 aa16.52■□□□□ 0.24
TUBB3-207ENST00000554927 RGS3P49796 1198 aa16.52■□□□□ 0.24
TUBB3-207ENST00000554927 RABL6Q3YEC7 729 aaPredicted RBP16.52■□□□□ 0.24
TUBB3-207ENST00000554927 HMX1Q9NP08 348 aaPredicted RBP16.52■□□□□ 0.24
TUBB3-207ENST00000554927 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
TUBB3-207ENST00000554927 AGTPBP1Q9UPW5 1226 aa16.52■□□□□ 0.24
TUBB3-207ENST00000554927 E9PSI1 815 aa16.51■□□□□ 0.23
TUBB3-207ENST00000554927 FGFR2P21802 821 aa16.51■□□□□ 0.23
TUBB3-207ENST00000554927 LPIN2Q92539 896 aa16.51■□□□□ 0.23
TUBB3-207ENST00000554927 COL25A1Q9BXS0 654 aaPredicted RBP16.51■□□□□ 0.23
TUBB3-207ENST00000554927 GNL3LQ9NVN8 582 aaKnown RBP16.51■□□□□ 0.23
TUBB3-207ENST00000554927 UTYO14607 1347 aa16.5■□□□□ 0.23
TUBB3-207ENST00000554927 RPTORQ8N122 1335 aa16.5■□□□□ 0.23
TUBB3-207ENST00000554927 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
TUBB3-207ENST00000554927 FAM110CQ1W6H9 321 aa16.5■□□□□ 0.23
TUBB3-207ENST00000554927 TREML2Q5T2D2 321 aa16.5■□□□□ 0.23
TUBB3-207ENST00000554927 CCDC84Q86UT8 332 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-207ENST00000554927 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-207ENST00000554927 ATRNL1Q5VV63 1379 aa16.5■□□□□ 0.23
TUBB3-207ENST00000554927 ENTPD3O75355 529 aa16.49■□□□□ 0.23
TUBB3-207ENST00000554927 TRIM32Q13049 653 aa16.49■□□□□ 0.23
TUBB3-207ENST00000554927 PICALMQ13492 652 aa16.49■□□□□ 0.23
TUBB3-207ENST00000554927 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.49■□□□□ 0.23
TUBB3-207ENST00000554927 SLURP2P0DP57 97 aa16.48■□□□□ 0.23
TUBB3-207ENST00000554927 SH3BP5LQ7L8J4 393 aa16.48■□□□□ 0.23
TUBB3-207ENST00000554927 IDI2Q9BXS1 227 aa16.48■□□□□ 0.23
TUBB3-207ENST00000554927 ALPK3Q96L96 1907 aa16.48■□□□□ 0.23
TUBB3-207ENST00000554927 ZNF521Q96K83 1311 aa16.47■□□□□ 0.23
TUBB3-207ENST00000554927 DDTLA6NHG4 134 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-207ENST00000554927 EYA2O00167 538 aa16.47■□□□□ 0.23
TUBB3-207ENST00000554927 GCLCP48506 637 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-207ENST00000554927 PABPC4Q13310 644 aaKnown RBP eCLIP16.46■□□□□ 0.23
TUBB3-207ENST00000554927 ATP2B3Q16720 1220 aa16.46■□□□□ 0.23
TUBB3-207ENST00000554927 DZIP1Q86YF9 867 aaKnown RBP16.46■□□□□ 0.23
TUBB3-207ENST00000554927 PROCA1Q8NCQ7 364 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-207ENST00000554927 DENND2AQ9ULE3 1009 aa16.46■□□□□ 0.23
TUBB3-207ENST00000554927 MDM2Q00987 491 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-207ENST00000554927 SPP2Q13103 211 aa16.45■□□□□ 0.22
TUBB3-207ENST00000554927 SLF2Q8IX21 1173 aa16.45■□□□□ 0.22
TUBB3-207ENST00000554927 ZGPATQ8N5A5 531 aaKnown RBP16.45■□□□□ 0.22
TUBB3-207ENST00000554927 FAM161BQ96MY7 647 aa16.45■□□□□ 0.22
TUBB3-207ENST00000554927 SIL1Q9H173 461 aa16.45■□□□□ 0.22
TUBB3-207ENST00000554927 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.45■□□□□ 0.22
TUBB3-207ENST00000554927 GJD2Q9UKL4 321 aa16.45■□□□□ 0.22
TUBB3-207ENST00000554927 OGDHLQ9ULD0 1010 aa16.45■□□□□ 0.22
TUBB3-207ENST00000554927 DOCK2Q92608 1830 aa16.45■□□□□ 0.22
TUBB3-207ENST00000554927 PTPRCP08575 1304 aa16.45■□□□□ 0.22
TUBB3-207ENST00000554927 SALL1Q9NSC2 1324 aa16.45■□□□□ 0.22
TUBB3-207ENST00000554927 PRKAR2AP13861 404 aaKnown RBP16.44■□□□□ 0.22
TUBB3-207ENST00000554927 CYP2B6P20813 491 aa16.44■□□□□ 0.22
TUBB3-207ENST00000554927 HMGCS2P54868 508 aa16.44■□□□□ 0.22
TUBB3-207ENST00000554927 MAP3K10Q02779 954 aa16.44■□□□□ 0.22
TUBB3-207ENST00000554927 MRPL50Q8N5N7 158 aaKnown RBP16.44■□□□□ 0.22
TUBB3-207ENST00000554927 TRIB2Q92519 343 aa16.44■□□□□ 0.22
TUBB3-207ENST00000554927 ASCC2Q9H1I8 757 aaPredicted RBP16.44■□□□□ 0.22
TUBB3-207ENST00000554927 DDX4Q9NQI0 724 aaKnown RBP16.44■□□□□ 0.22
TUBB3-207ENST00000554927 CEP126Q9P2H0 1117 aa16.44■□□□□ 0.22
TUBB3-207ENST00000554927 ABCF2Q9UG63 623 aa16.44■□□□□ 0.22
TUBB3-207ENST00000554927 MYH13Q9UKX3 1938 aa16.44■□□□□ 0.22
TUBB3-207ENST00000554927 PFASO15067 1338 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms