RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 MMP20O60882 483 aa7.06□□□□□ -1.28
ATXN3-228ENST00000554592 HOXD8P13378 290 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-228ENST00000554592 NPR3P17342 541 aa7.06□□□□□ -1.28
ATXN3-228ENST00000554592 AFF1P51825 1210 aaKnown RBP7.06□□□□□ -1.28
ATXN3-228ENST00000554592 MFAP1P55081 439 aaKnown RBP7.06□□□□□ -1.28
ATXN3-228ENST00000554592 PLAURQ03405 335 aa7.06□□□□□ -1.28
ATXN3-228ENST00000554592 GPR162Q16538 588 aa7.06□□□□□ -1.28
ATXN3-228ENST00000554592 PSAPL1Q6NUJ1 521 aa7.06□□□□□ -1.28
ATXN3-228ENST00000554592 PTF1AQ7RTS3 328 aa7.06□□□□□ -1.28
ATXN3-228ENST00000554592 GTF3C2Q8WUA4 911 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-228ENST00000554592 SPOCK3Q9BQ16 436 aa7.06□□□□□ -1.28
ATXN3-228ENST00000554592 LPIN3Q9BQK8 851 aa7.06□□□□□ -1.28
ATXN3-228ENST00000554592 KNDC1Q76NI1 1749 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 OVOS2A0A0G2JMS6 1433 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 OVOS2A0A0J9YW53 1432 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 OVOS2Q6IE36 1432 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 SOWAHDA6NJG2 315 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 LILRB5O75023 590 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 NRLP54845 237 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 PCSK7Q16549 785 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 PERM1Q5SV97 790 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 TOM1L2Q6ZVM7 507 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 FAM35AQ86V20 835 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 CD163Q86VB7 1156 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 ATCAYQ86WG3 371 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 MARCH10Q8NA82 808 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-228ENST00000554592 GPR152Q8TDT2 470 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 NUDT8Q8WV74 236 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 PIK3R5Q8WYR1 880 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 FRRS1LQ9P0K9 344 aa7.05□□□□□ -1.28
ATXN3-228ENST00000554592 POLR3AO14802 1390 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-228ENST00000554592 TNS1Q9HBL0 1735 aaKnown RBP7.04□□□□□ -1.28
ATXN3-228ENST00000554592 USP19O94966 1318 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 CAMTA1Q9Y6Y1 1673 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 C1QTNF9BB2RNN3 333 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 EXOC5O00471 708 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 CPB1P15086 417 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 SOX18P35713 384 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 CHRNA4P43681 627 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 MLLT1Q03111 559 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-228ENST00000554592 DCAF11Q8TEB1 546 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 TTC9Q92623 222 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 JPH1Q9HDC5 661 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-228ENST00000554592 FAM13BQ9NYF5 915 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 MTMR7Q9Y216 660 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 TULP4Q9NRJ4 1543 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 ATP7BP35670 1465 aa7.04□□□□□ -1.28
ATXN3-228ENST00000554592 BCL9O00512 1426 aa7.03□□□□□ -1.28
ATXN3-228ENST00000554592 CRB1P82279 1406 aa7.03□□□□□ -1.28
ATXN3-228ENST00000554592 MSTNO14793 375 aa7.03□□□□□ -1.28
ATXN3-228ENST00000554592 ABL1P00519 1130 aa7.03□□□□□ -1.28
ATXN3-228ENST00000554592 SPATA31C1P0DKV0 1188 aa7.03□□□□□ -1.28
ATXN3-228ENST00000554592 MTMR3Q13615 1198 aa7.03□□□□□ -1.28
ATXN3-228ENST00000554592 HFE2Q6ZVN8 426 aa7.03□□□□□ -1.28
ATXN3-228ENST00000554592 RGS22Q8NE09 1264 aa7.03□□□□□ -1.28
ATXN3-228ENST00000554592 ANO2Q9NQ90 1003 aa7.03□□□□□ -1.28
ATXN3-228ENST00000554592 AATKQ6ZMQ8 1374 aa7.03□□□□□ -1.28
ATXN3-228ENST00000554592 MAP3K5Q99683 1374 aa7.03□□□□□ -1.28
ATXN3-228ENST00000554592 ALS2Q96Q42 1657 aa7.03□□□□□ -1.28
ATXN3-228ENST00000554592 ABCA3Q99758 1704 aa7.02□□□□□ -1.29
ATXN3-228ENST00000554592 TRPM3Q9HCF6 1732 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-228ENST00000554592 LOC102724428A0A0B4J2F2 783 aa7.02□□□□□ -1.29
ATXN3-228ENST00000554592 FAM229AH3BQW9 127 aa7.02□□□□□ -1.29
ATXN3-228ENST00000554592 RGS9O75916 674 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-228ENST00000554592 MPSTP25325 297 aa7.02□□□□□ -1.29
ATXN3-228ENST00000554592 EIF1AXP47813 144 aaKnown RBP7.02□□□□□ -1.29
ATXN3-228ENST00000554592 SIK1P57059 783 aa7.02□□□□□ -1.29
ATXN3-228ENST00000554592 ZNF211Q13398 564 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-228ENST00000554592 COL13A1Q5TAT6 717 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-228ENST00000554592 OR13H1Q8NG92 308 aa7.02□□□□□ -1.29
ATXN3-228ENST00000554592 CARD10Q9BWT7 1032 aa7.02□□□□□ -1.29
ATXN3-228ENST00000554592 EGFL7Q9UHF1 273 aa7.02□□□□□ -1.29
ATXN3-228ENST00000554592 BRD4O60885 1362 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-228ENST00000554592 WDR17Q8IZU2 1322 aa7.01□□□□□ -1.29
ATXN3-228ENST00000554592 RGPD8O14715 1765 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-228ENST00000554592 RREB1Q92766 1687 aa7.01□□□□□ -1.29
ATXN3-228ENST00000554592 COL5A2P05997 1499 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-228ENST00000554592 A0A0A0MRY4 1105 aa7.01□□□□□ -1.29
ATXN3-228ENST00000554592 J3QW42 95 aa7.01□□□□□ -1.29
ATXN3-228ENST00000554592 GRIN3BO60391 1043 aa7.01□□□□□ -1.29
ATXN3-228ENST00000554592 ICMTO60725 284 aa7.01□□□□□ -1.29
ATXN3-228ENST00000554592 PSAPP07602 524 aa7.01□□□□□ -1.29
ATXN3-228ENST00000554592 POLD1P28340 1107 aa7.01□□□□□ -1.29
ATXN3-228ENST00000554592 ECM1Q16610 540 aa7.01□□□□□ -1.29
ATXN3-228ENST00000554592 CCDC27Q2M243 656 aa7.01□□□□□ -1.29
ATXN3-228ENST00000554592 NOM1Q5C9Z4 860 aaKnown RBP7.01□□□□□ -1.29
ATXN3-228ENST00000554592 GGNBP2Q9H3C7 697 aa7.01□□□□□ -1.29
ATXN3-228ENST00000554592 ADGRB1O14514 1584 aa7□□□□□ -1.29
ATXN3-228ENST00000554592 SPDYE3A6NKU9 549 aa7□□□□□ -1.29
ATXN3-228ENST00000554592 PDGFAP04085 211 aa7□□□□□ -1.29
ATXN3-228ENST00000554592 XKR5Q6UX68 686 aa7□□□□□ -1.29
ATXN3-228ENST00000554592 EDEM1Q92611 657 aa7□□□□□ -1.29
ATXN3-228ENST00000554592 SMG9Q9H0W8 520 aaKnown RBP7□□□□□ -1.29
ATXN3-228ENST00000554592 TMEM63CQ9P1W3 806 aa7□□□□□ -1.29
ATXN3-228ENST00000554592 FNDC3AQ9Y2H6 1198 aaKnown RBP7□□□□□ -1.29
ATXN3-228ENST00000554592 NUP188Q5SRE5 1749 aa7□□□□□ -1.29
ATXN3-228ENST00000554592 IFT172Q9UG01 1749 aa7□□□□□ -1.29
ATXN3-228ENST00000554592 NRKQ7Z2Y5 1582 aa6.99□□□□□ -1.29
ATXN3-228ENST00000554592 H3BRB1 525 aa6.99□□□□□ -1.29
ATXN3-228ENST00000554592 TRIM28Q13263 835 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms