RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 TBC1D10CQ8IV04 446 aa16.65■□□□□ 0.26
ABCD4-219ENST00000553745 TM6SF1Q9BZW5 370 aa16.65■□□□□ 0.26
ABCD4-219ENST00000553745 DCP1AQ9NPI6 582 aaPredicted RBP16.65■□□□□ 0.26
ABCD4-219ENST00000553745 PCDHAC2Q9Y5I4 1007 aa16.65■□□□□ 0.26
ABCD4-219ENST00000553745 E7EWF7 191 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 BRD1O95696 1058 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 XRCC6P12956 609 aaKnown RBP eCLIP16.64■□□□□ 0.25
ABCD4-219ENST00000553745 TEX11Q8IYF3 940 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 GMLQ99445 158 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 LMBRD1Q9NUN5 540 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 ISY1Q9ULR0 285 aaKnown RBP16.64■□□□□ 0.25
ABCD4-219ENST00000553745 PLCG2P16885 1265 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 USP5P45974 858 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 HDLBPQ00341 1268 aaKnown RBP16.64■□□□□ 0.25
ABCD4-219ENST00000553745 KLHL40Q2TBA0 621 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 GIMAP6Q6P9H5 292 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 TGFBRAP1Q8WUH2 860 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 ZDHHC15Q96MV8 337 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 ZSWIM6Q9HCJ5 1215 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 ATP8A2Q9NTI2 1148 aa16.64■□□□□ 0.25
ABCD4-219ENST00000553745 ZNF541Q9H0D2 1346 aa16.63■□□□□ 0.25
ABCD4-219ENST00000553745 FZD9O00144 591 aa16.63■□□□□ 0.25
ABCD4-219ENST00000553745 LMNB1P20700 586 aa16.63■□□□□ 0.25
ABCD4-219ENST00000553745 PSMA5P28066 241 aa16.63■□□□□ 0.25
ABCD4-219ENST00000553745 CTDSPL2Q05D32 466 aa16.63■□□□□ 0.25
ABCD4-219ENST00000553745 MCTP1Q6DN14 999 aa16.63■□□□□ 0.25
ABCD4-219ENST00000553745 APOBEC3HQ6NTF7 200 aaKnown RBP16.63■□□□□ 0.25
ABCD4-219ENST00000553745 NEK1Q96PY6 1258 aa16.63■□□□□ 0.25
ABCD4-219ENST00000553745 MKRN1Q9UHC7 482 aaKnown RBP16.63■□□□□ 0.25
ABCD4-219ENST00000553745 SERPINA10Q9UK55 444 aa16.63■□□□□ 0.25
ABCD4-219ENST00000553745 CYP2D7A0A087X1C5 515 aa16.62■□□□□ 0.25
ABCD4-219ENST00000553745 RBM5P52756 815 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■□□□□ 10.6
ABCD4-219ENST00000553745 PPARAQ07869 468 aa16.62■□□□□ 0.25
ABCD4-219ENST00000553745 CTR9Q6PD62 1173 aa16.62■□□□□ 0.25
ABCD4-219ENST00000553745 BLOC1S2Q6QNY1 142 aa16.62■□□□□ 0.25
ABCD4-219ENST00000553745 NOL8Q76FK4 1167 aaKnown RBP16.62■□□□□ 0.25
ABCD4-219ENST00000553745 RUFY3Q7L099 469 aa16.62■□□□□ 0.25
ABCD4-219ENST00000553745 MAPKAPK5Q8IW41 473 aa16.62■□□□□ 0.25
ABCD4-219ENST00000553745 AGBL3Q8NEM8 1001 aa16.62■□□□□ 0.25
ABCD4-219ENST00000553745 MRIQ9BWK5 157 aa16.62■□□□□ 0.25
ABCD4-219ENST00000553745 CYP46A1Q9Y6A2 500 aa16.62■□□□□ 0.25
ABCD4-219ENST00000553745 FLT1P17948 1338 aa16.62■□□□□ 0.25
ABCD4-219ENST00000553745 NEDD4P46934 1319 aa16.62■□□□□ 0.25
ABCD4-219ENST00000553745 MINDY4BA8MYZ0 360 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 SMIM22K7EJ46 135 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 RPS6KB1P23443 525 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 EIF6P56537 245 aaKnown RBP16.61■□□□□ 0.25
ABCD4-219ENST00000553745 EVX2Q03828 476 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 TNIP1Q15025 636 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 TCEANC2Q96MN5 208 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 ARPP21Q9UBL0 812 aaPredicted RBP16.61■□□□□ 0.25
ABCD4-219ENST00000553745 TACC3Q9Y6A5 838 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 USP17L12C9JPN9 530 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 USP17L21D6R901 530 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 MRE11P49959 708 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 AK2P54819 239 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 SLC4A8Q2Y0W8 1093 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 CFAP100Q494V2 611 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 CDC42EP5Q6NZY7 148 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 USP40Q9NVE5 1235 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 MCM9Q9NXL9 1143 aa16.61■□□□□ 0.25
ABCD4-219ENST00000553745 WDHD1O75717 1129 aaPredicted RBP16.6■□□□□ 0.25
ABCD4-219ENST00000553745 USP17L8P0C7I0 530 aa16.6■□□□□ 0.25
ABCD4-219ENST00000553745 CYP2D6P10635 497 aa16.6■□□□□ 0.25
ABCD4-219ENST00000553745 STK11IPQ8N1F8 1099 aa16.6■□□□□ 0.25
ABCD4-219ENST00000553745 HDAC9Q9UKV0 1011 aa16.6■□□□□ 0.25
ABCD4-219ENST00000553745 LIMCH1Q9UPQ0 1083 aa16.6■□□□□ 0.25
ABCD4-219ENST00000553745 DDX49Q9Y6V7 483 aaKnown RBP16.6■□□□□ 0.25
ABCD4-219ENST00000553745 PICALMQ13492 652 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 GAS2L3Q86XJ1 694 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 STAG1Q8WVM7 1258 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 DDX4Q9NQI0 724 aaKnown RBP16.59■□□□□ 0.25
ABCD4-219ENST00000553745 INCENPQ9NQS7 918 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 PDRG1Q9NUG6 133 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 SAP30BPQ9UHR5 308 aaKnown RBP16.59■□□□□ 0.25
ABCD4-219ENST00000553745 ANAPC4Q9UJX5 808 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 GJA3Q9Y6H8 435 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 MYH8P13535 1937 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 SHTN1A0MZ66 631 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 SBK1Q52WX2 424 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 AKNAD1Q5T1N1 836 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 MB21D2Q8IYB1 491 aaPredicted RBP16.59■□□□□ 0.25
ABCD4-219ENST00000553745 OGFOD1Q8N543 542 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 NCOA7Q8NI08 942 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 NKX2-3Q8TAU0 364 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 RNF181Q9P0P0 153 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 SIPA1L1O43166 1804 aa16.59■□□□□ 0.25
ABCD4-219ENST00000553745 HMGB1P09429 215 aaKnown RBP16.58■□□□□ 0.24
ABCD4-219ENST00000553745 CACNB3P54284 484 aa16.58■□□□□ 0.24
ABCD4-219ENST00000553745 RALYLQ86SE5 291 aaKnown RBP16.58■□□□□ 0.24
ABCD4-219ENST00000553745 ROBO3Q96MS0 1386 aa16.58■□□□□ 0.24
ABCD4-219ENST00000553745 SPDYE2BA6NHP3 402 aa16.57■□□□□ 0.24
ABCD4-219ENST00000553745 B4E1Z4 1266 aa16.57■□□□□ 0.24
ABCD4-219ENST00000553745 SPDYE6P0CI01 402 aa16.57■□□□□ 0.24
ABCD4-219ENST00000553745 RPS12P25398 132 aaKnown RBP16.57■□□□□ 0.24
ABCD4-219ENST00000553745 GMPSP49915 693 aaPredicted RBP16.57■□□□□ 0.24
ABCD4-219ENST00000553745 NFIAQ12857 509 aa16.57■□□□□ 0.24
ABCD4-219ENST00000553745 GPR162Q16538 588 aa16.57■□□□□ 0.24
ABCD4-219ENST00000553745 DHX32Q7L7V1 743 aaKnown RBP16.57■□□□□ 0.24
ABCD4-219ENST00000553745 CHST3Q7LGC8 479 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms