RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 SOCS7O14512 581 aa16.29■□□□□ 0.2
APEX1-205ENST00000553555 EXOSC10Q01780 885 aaKnown RBP16.29■□□□□ 0.2
APEX1-205ENST00000553555 AKNAD1Q5T1N1 836 aa16.29■□□□□ 0.2
APEX1-205ENST00000553555 USP40Q9NVE5 1235 aa16.29■□□□□ 0.2
APEX1-205ENST00000553555 MCM9Q9NXL9 1143 aa16.29■□□□□ 0.2
APEX1-205ENST00000553555 ARPP21Q9UBL0 812 aaPredicted RBP16.29■□□□□ 0.2
APEX1-205ENST00000553555 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
APEX1-205ENST00000553555 TACC3Q9Y6A5 838 aa16.29■□□□□ 0.2
APEX1-205ENST00000553555 CYP2D7A0A087X1C5 515 aa16.28■□□□□ 0.2
APEX1-205ENST00000553555 CDC42EP5Q6NZY7 148 aa16.28■□□□□ 0.2
APEX1-205ENST00000553555 MAPKAPK5Q8IW41 473 aa16.28■□□□□ 0.2
APEX1-205ENST00000553555 MB21D2Q8IYB1 491 aaPredicted RBP16.28■□□□□ 0.2
APEX1-205ENST00000553555 STAG1Q8WVM7 1258 aa16.28■□□□□ 0.2
APEX1-205ENST00000553555 TCEANC2Q96MN5 208 aa16.28■□□□□ 0.2
APEX1-205ENST00000553555 HDAC9Q9UKV0 1011 aa16.28■□□□□ 0.2
APEX1-205ENST00000553555 PCDHAC2Q9Y5I4 1007 aa16.28■□□□□ 0.2
APEX1-205ENST00000553555 DDX60LQ5H9U9 1706 aaKnown RBP16.28■□□□□ 0.2
APEX1-205ENST00000553555 USP17L8P0C7I0 530 aa16.27■□□□□ 0.2
APEX1-205ENST00000553555 YBX3P16989 372 aaKnown RBP eCLIP16.27■□□□□ 0.26e-9■■□□□ 13.2
APEX1-205ENST00000553555 LMNB1P20700 586 aa16.27■□□□□ 0.2
APEX1-205ENST00000553555 RBM5P52756 815 aaKnown RBP eCLIP16.27■□□□□ 0.24e-13■■■□□ 17.9
APEX1-205ENST00000553555 EIF6P56537 245 aaKnown RBP16.27■□□□□ 0.2
APEX1-205ENST00000553555 TRDNQ13061 729 aa16.27■□□□□ 0.2
APEX1-205ENST00000553555 CFAP100Q494V2 611 aa16.27■□□□□ 0.2
APEX1-205ENST00000553555 MFSD6Q6ZSS7 791 aa16.27■□□□□ 0.2
APEX1-205ENST00000553555 INCENPQ9NQS7 918 aa16.27■□□□□ 0.2
APEX1-205ENST00000553555 SMIM22K7EJ46 135 aa16.27■□□□□ 0.19
APEX1-205ENST00000553555 WDHD1O75717 1129 aaPredicted RBP16.27■□□□□ 0.19
APEX1-205ENST00000553555 CYP2D6P10635 497 aa16.27■□□□□ 0.19
APEX1-205ENST00000553555 ANKRD1Q15327 319 aa16.27■□□□□ 0.19
APEX1-205ENST00000553555 C12orf60Q5U649 245 aa16.27■□□□□ 0.19
APEX1-205ENST00000553555 RALYLQ86SE5 291 aaKnown RBP16.27■□□□□ 0.19
APEX1-205ENST00000553555 OGFOD1Q8N543 542 aa16.27■□□□□ 0.19
APEX1-205ENST00000553555 RNF41Q9H4P4 317 aaPredicted RBP16.27■□□□□ 0.19
APEX1-205ENST00000553555 CNNM2Q9H8M5 875 aa16.27■□□□□ 0.19
APEX1-205ENST00000553555 LIMCH1Q9UPQ0 1083 aa16.27■□□□□ 0.19
APEX1-205ENST00000553555 FLT1P17948 1338 aa16.26■□□□□ 0.19
APEX1-205ENST00000553555 FGRP09769 529 aa16.26■□□□□ 0.19
APEX1-205ENST00000553555 MCM5P33992 734 aa16.26■□□□□ 0.19
APEX1-205ENST00000553555 TOB2Q14106 344 aaPredicted RBP16.26■□□□□ 0.19
APEX1-205ENST00000553555 Q6ZUG5 572 aa16.26■□□□□ 0.19
APEX1-205ENST00000553555 NOL8Q76FK4 1167 aaKnown RBP16.26■□□□□ 0.19
APEX1-205ENST00000553555 TMX3Q96JJ7 454 aa16.26■□□□□ 0.19
APEX1-205ENST00000553555 KRT23Q9C075 422 aa16.26■□□□□ 0.19
APEX1-205ENST00000553555 NEDD4P46934 1319 aa16.26■□□□□ 0.19
APEX1-205ENST00000553555 B4E1Z4 1266 aa16.25■□□□□ 0.19
APEX1-205ENST00000553555 RPS12P25398 132 aaKnown RBP16.25■□□□□ 0.19
APEX1-205ENST00000553555 MMP14P50281 582 aa16.25■□□□□ 0.19
APEX1-205ENST00000553555 ANTXR2P58335 489 aa16.25■□□□□ 0.19
APEX1-205ENST00000553555 EVX2Q03828 476 aa16.25■□□□□ 0.19
APEX1-205ENST00000553555 CHST3Q7LGC8 479 aa16.25■□□□□ 0.19
APEX1-205ENST00000553555 AMOTL1Q8IY63 956 aa16.25■□□□□ 0.19
APEX1-205ENST00000553555 STK11IPQ8N1F8 1099 aa16.25■□□□□ 0.19
APEX1-205ENST00000553555 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
APEX1-205ENST00000553555 PRMT6Q96LA8 375 aaPredicted RBP16.25■□□□□ 0.19
APEX1-205ENST00000553555 AGXT2Q9BYV1 514 aa16.25■□□□□ 0.19
APEX1-205ENST00000553555 WDR19Q8NEZ3 1342 aa16.25■□□□□ 0.19
APEX1-205ENST00000553555 PRC1O43663 620 aa16.24■□□□□ 0.19
APEX1-205ENST00000553555 POLR3DP05423 398 aaPredicted RBP16.24■□□□□ 0.19
APEX1-205ENST00000553555 SLC3A2P08195 630 aaKnown RBP16.24■□□□□ 0.19
APEX1-205ENST00000553555 PCP11498 1178 aaKnown RBP16.24■□□□□ 0.19
APEX1-205ENST00000553555 CYB5R4Q7L1T6 521 aa16.24■□□□□ 0.19
APEX1-205ENST00000553555 FBXL16Q8N461 479 aa16.24■□□□□ 0.19
APEX1-205ENST00000553555 MTMR14Q8NCE2 650 aa16.24■□□□□ 0.19
APEX1-205ENST00000553555 ZSCAN31Q96LW9 406 aaPredicted RBP16.24■□□□□ 0.19
APEX1-205ENST00000553555 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
APEX1-205ENST00000553555 LRRC2Q9BYS8 371 aa16.24■□□□□ 0.19
APEX1-205ENST00000553555 DDX4Q9NQI0 724 aaKnown RBP16.24■□□□□ 0.19
APEX1-205ENST00000553555 SAP30BPQ9UHR5 308 aaKnown RBP16.24■□□□□ 0.19
APEX1-205ENST00000553555 PLCD1P51178 756 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 PICALMQ13492 652 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 DLGAP5Q15398 846 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 SPRYD3Q8NCJ5 442 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 IDI2Q9BXS1 227 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 TDRD3Q9H7E2 651 aaKnown RBP16.23■□□□□ 0.19
APEX1-205ENST00000553555 ZSWIM5Q9P217 1185 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
APEX1-205ENST00000553555 MYH8P13535 1937 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 SPDYE2BA6NHP3 402 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 ORC4O43929 436 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 KDM4AO75164 1064 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 NPM3O75607 178 aaKnown RBP16.23■□□□□ 0.19
APEX1-205ENST00000553555 SPDYE6P0CI01 402 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 CUL4AQ13619 759 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 RRP12Q5JTH9 1297 aaKnown RBP16.23■□□□□ 0.19
APEX1-205ENST00000553555 DPF2Q92785 391 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 TOMM22Q9NS69 142 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 TPCN1Q9ULQ1 816 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 GJA3Q9Y6H8 435 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 ZNF541Q9H0D2 1346 aa16.23■□□□□ 0.19
APEX1-205ENST00000553555 ROBO3Q96MS0 1386 aa16.22■□□□□ 0.19
APEX1-205ENST00000553555 ZNF280AP59817 542 aaPredicted RBP16.22■□□□□ 0.19
APEX1-205ENST00000553555 FGD1P98174 961 aa16.22■□□□□ 0.19
APEX1-205ENST00000553555 PDE4BQ07343 736 aa16.22■□□□□ 0.19
APEX1-205ENST00000553555 NFIAQ12857 509 aa16.22■□□□□ 0.19
APEX1-205ENST00000553555 SLC4A8Q2Y0W8 1093 aa16.22■□□□□ 0.19
APEX1-205ENST00000553555 BRF1Q92994 677 aa16.22■□□□□ 0.19
APEX1-205ENST00000553555 ZBED3Q96IU2 234 aaPredicted RBP16.22■□□□□ 0.19
APEX1-205ENST00000553555 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
APEX1-205ENST00000553555 GMPSP49915 693 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms