RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, human

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-223	ENST00000552352	TUBE1	Q9UJT0	475 aa		9.22	□□□□□ -0.93
RPH3A-223	ENST00000552352	PPP2R2C	Q9Y2T4	447 aa		9.22	□□□□□ -0.93
RPH3A-223	ENST00000552352	RGL2	O15211	777 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	TOP1	P11387	765 aa	Known RBP	9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	PFKFB1	P16118	471 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	IL6ST	P40189	918 aa	Predicted RBP	9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	PPP2R3A	Q06190	1150 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	CFAP100	Q494V2	611 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	MYSM1	Q5VVJ2	828 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	JAKMIP3	Q5VZ66	844 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	TMEM139	Q8IV31	216 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	GOLGA5	Q8TBA6	731 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	RABGGTA	Q92696	567 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	EXOC4	Q96A65	974 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	RASSF4	Q9H2L5	321 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	HELLS	Q9NRZ9	838 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	NDUFB9	Q9Y6M9	179 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	AXDND1	Q5T1B0	1012 aa	Predicted RBP	9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	DDX46	Q7L014	1031 aa	Known RBP	9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	DPF2	Q92785	391 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	CCDC34	Q96HJ3	373 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	C8orf76	Q96K31	380 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	FUT8	Q9BYC5	575 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	ZBTB3	Q9H5J0	574 aa		9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	ZCCHC17	Q9NP64	241 aa	Known RBP	9.21	□□□□□ -0.94
RPH3A-223	ENST00000552352	SPATA31A5	Q5VU36	1347 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	SPATA31A7	Q8IWB4	1347 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	PPFIA3	O75145	1194 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	GOLGA1	Q92805	767 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	DBNDD2	Q9BQY9	259 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	EPC1	Q9H2F5	836 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	MROH7-TTC4	A0A0A0MT08	1334 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	CCDC151	A5D8V7	595 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	POLR3D	P05423	398 aa	Predicted RBP	9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	GNG11	P61952	73 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	GNL2	Q13823	731 aa	Known RBP	9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	ANO1	Q5XXA6	986 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	SYNE3	Q6ZMZ3	975 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	FBXO18	Q8NFZ0	1043 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	WDR24	Q96S15	920 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	PARD6B	Q9BYG5	372 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	EFCC1	Q9HA90	598 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	AKAP2	Q9Y2D5	859 aa		9.2	□□□□□ -0.94
RPH3A-223	ENST00000552352	DHX16	O60231	1041 aa	Known RBP	9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	STX10	O60499	249 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	TXLNA	P40222	546 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	IQUB	Q8NA54	791 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	RGS22	Q8NE09	1264 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	KIFC2	Q96AC6	838 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	SLC4A9	Q96Q91	983 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	BAG1	Q99933	345 aa	Predicted RBP	9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	ADAM21	Q9UKJ8	722 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	LAMB2	P55268	1798 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	TMEM232	C9JQI7	657 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	MYO1C	O00159	1063 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	MAP2K7	O14733	419 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	HSPD1	P10809	573 aa	Known RBP	9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	SYK	P43405	635 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	TBX2	Q13207	712 aa	Predicted RBP	9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	BRD3	Q15059	726 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	LONRF2	Q1L5Z9	754 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	OTUD7B	Q6GQQ9	843 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	NLRP10	Q86W26	655 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	FAM177A1	Q8N128	213 aa	Predicted RBP	9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	HPSE	Q9Y251	543 aa		9.19	□□□□□ -0.94
RPH3A-223	ENST00000552352	MYH3	P11055	1940 aa		9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352	KIF23	Q02241	960 aa	Predicted RBP	9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352	GOLGA8F	Q08AF8	430 aa		9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352	GOLGA8DP	Q0D2H9	430 aa		9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352	SLC39A14	Q15043	492 aa		9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352	ZMYM1	Q5SVZ6	1142 aa		9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352	ISM2	Q6H9L7	571 aa		9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352	CHST3	Q7LGC8	479 aa		9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352	ZNF512B	Q96KM6	892 aa	Predicted RBP	9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352	PAG1	Q9NWQ8	432 aa		9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352	NUP98	P52948	1817 aa		9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352	ARAP2	Q8WZ64	1704 aa		9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352	RIC1	Q4ADV7	1423 aa		9.18	□□□□□ -0.94
RPH3A-223	ENST00000552352		A0A0G2JLW4	131 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	KIF28P	B7ZC32	967 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	WDHD1	O75717	1129 aa	Predicted RBP	9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	LMAN1	P49257	510 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	CCDC57	Q2TAC2	916 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	OLFM4	Q6UX06	510 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	SRL	Q86TD4	932 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	HNRNPLL	Q8WVV9	542 aa	Known RBP	9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	DHX58	Q96C10	678 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	INTS13	Q9NVM9	706 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	COL5A3	P25940	1745 aa	Predicted RBP	9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	RTL9	Q8NET4	1388 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	DDX60	Q8IY21	1712 aa	Known RBP	9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	FAM237A	A0A1B0GTK4	181 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352		H3BQF6	201 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	GOLIM4	O00461	696 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	PPP6R2	O75170	966 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	ACTN2	P35609	894 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	TNNT3	P45378	269 aa	Predicted RBP	9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	DDB1	Q16531	1140 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	TOGARAM2	Q6ZUX3	1019 aa		9.17	□□□□□ -0.94
RPH3A-223	ENST00000552352	ZNF34	Q8IZ26	560 aa		9.17	□□□□□ -0.94

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