RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 TRDNQ13061 729 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 ANKRD1Q15327 319 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 SBK1Q52WX2 424 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 APOBEC3HQ6NTF7 200 aaKnown RBP14.35□□□□□ -0.11
CACNB3-213ENST00000550064 MFSD6Q6ZSS7 791 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 CHST3Q7LGC8 479 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 RALYLQ86SE5 291 aaKnown RBP14.35□□□□□ -0.11
CACNB3-213ENST00000550064 MAPKAPK5Q8IW41 473 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 NKX2-3Q8TAU0 364 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 STAG1Q8WVM7 1258 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 JDP2Q8WYK2 163 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 GMLQ99445 158 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 LRRC2Q9BYS8 371 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 USP40Q9NVE5 1235 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 NAV1Q8NEY1 1877 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 NEDD4P46934 1319 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 MYO3BQ8WXR4 1341 aa14.35□□□□□ -0.11
CACNB3-213ENST00000550064 PRC1O43663 620 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 HSP90AA1P07900 732 aaKnown RBP14.34□□□□□ -0.11
CACNB3-213ENST00000550064 CYP2D6P10635 497 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 MCM5P33992 734 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 ANTXR2P58335 489 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 CUL4AQ13619 759 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 CDC42EP5Q6NZY7 148 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 STK11IPQ8N1F8 1099 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 ZSCAN31Q96LW9 406 aaPredicted RBP14.34□□□□□ -0.11
CACNB3-213ENST00000550064 ZDHHC15Q96MV8 337 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 SLKQ9H2G2 1235 aaPredicted RBP14.34□□□□□ -0.11
CACNB3-213ENST00000550064 MCM9Q9NXL9 1143 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 ARPP21Q9UBL0 812 aaPredicted RBP14.34□□□□□ -0.11
CACNB3-213ENST00000550064 SERPINA10Q9UK55 444 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 PCDHAC2Q9Y5I4 1007 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 LAMB1P07942 1786 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 FOCADQ5VW36 1801 aa14.34□□□□□ -0.11
CACNB3-213ENST00000550064 B4E1Z4 1266 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 LARGE1O95461 756 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 RBM5P52756 815 aaKnown RBP eCLIP14.33□□□□□ -0.12
CACNB3-213ENST00000550064 FGD1P98174 961 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 EVX2Q03828 476 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 C12orf60Q5U649 245 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 CIAPIN1Q6FI81 312 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 ARHGAP27Q6ZUM4 889 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 CYB5R4Q7L1T6 521 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 KRT23Q9C075 422 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 RNF41Q9H4P4 317 aaPredicted RBP14.33□□□□□ -0.12
CACNB3-213ENST00000550064 CNNM2Q9H8M5 875 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 TPCN1Q9ULQ1 816 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 ZBTB12Q9Y330 459 aaPredicted RBP14.33□□□□□ -0.12
CACNB3-213ENST00000550064 WDR19Q8NEZ3 1342 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 MYH1P12882 1939 aa14.33□□□□□ -0.12
CACNB3-213ENST00000550064 ECM29Q5VYK3 1845 aa14.32□□□□□ -0.12
CACNB3-213ENST00000550064 ME3Q16798 604 aa14.32□□□□□ -0.12
CACNB3-213ENST00000550064 RRP12Q5JTH9 1297 aaKnown RBP14.32□□□□□ -0.12
CACNB3-213ENST00000550064 AGBL3Q8NEM8 1001 aa14.32□□□□□ -0.12
CACNB3-213ENST00000550064 BRF1Q92994 677 aa14.32□□□□□ -0.12
CACNB3-213ENST00000550064 AGXT2Q9BYV1 514 aa14.32□□□□□ -0.12
CACNB3-213ENST00000550064 TOMM22Q9NS69 142 aa14.32□□□□□ -0.12
CACNB3-213ENST00000550064 SAP30BPQ9UHR5 308 aaKnown RBP14.32□□□□□ -0.12
CACNB3-213ENST00000550064 FLT1P17948 1338 aa14.32□□□□□ -0.12
CACNB3-213ENST00000550064 KDM4AO75164 1064 aa14.31□□□□□ -0.12
CACNB3-213ENST00000550064 WDHD1O75717 1129 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-213ENST00000550064 POLR3DP05423 398 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-213ENST00000550064 SLC3A2P08195 630 aaKnown RBP14.31□□□□□ -0.12
CACNB3-213ENST00000550064 FGRP09769 529 aa14.31□□□□□ -0.12
CACNB3-213ENST00000550064 TNIP1Q15025 636 aa14.31□□□□□ -0.12
CACNB3-213ENST00000550064 SLC4A8Q2Y0W8 1093 aa14.31□□□□□ -0.12
CACNB3-213ENST00000550064 CFAP100Q494V2 611 aa14.31□□□□□ -0.12
CACNB3-213ENST00000550064 AMOTL1Q8IY63 956 aa14.31□□□□□ -0.12
CACNB3-213ENST00000550064 FBXL16Q8N461 479 aa14.31□□□□□ -0.12
CACNB3-213ENST00000550064 GPHNQ9NQX3 736 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-213ENST00000550064 SH2B1Q9NRF2 756 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-213ENST00000550064 ZSWIM5Q9P217 1185 aa14.31□□□□□ -0.12
CACNB3-213ENST00000550064 HDAC9Q9UKV0 1011 aa14.31□□□□□ -0.12
CACNB3-213ENST00000550064 DDX60LQ5H9U9 1706 aaKnown RBP14.31□□□□□ -0.12
CACNB3-213ENST00000550064 FZD9O00144 591 aa14.3□□□□□ -0.12
CACNB3-213ENST00000550064 PCP11498 1178 aaKnown RBP14.3□□□□□ -0.12
CACNB3-213ENST00000550064 DDIT3P35638 169 aa14.3□□□□□ -0.12
CACNB3-213ENST00000550064 APOBRQ0VD83 1088 aa14.3□□□□□ -0.12
CACNB3-213ENST00000550064 PICALMQ13492 652 aa14.3□□□□□ -0.12
CACNB3-213ENST00000550064 NECAB1Q8N987 351 aa14.3□□□□□ -0.12
CACNB3-213ENST00000550064 INTS4Q96HW7 963 aaKnown RBP14.3□□□□□ -0.12
CACNB3-213ENST00000550064 DDX4Q9NQI0 724 aaKnown RBP14.3□□□□□ -0.12
CACNB3-213ENST00000550064 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.3□□□□□ -0.12
CACNB3-213ENST00000550064 SH2B2O14492 632 aaPredicted RBP14.29□□□□□ -0.12
CACNB3-213ENST00000550064 ORC4O43929 436 aa14.29□□□□□ -0.12
CACNB3-213ENST00000550064 PRDM1O75626 825 aa14.29□□□□□ -0.12
CACNB3-213ENST00000550064 PLCD1P51178 756 aa14.29□□□□□ -0.12
CACNB3-213ENST00000550064 EIF6P56537 245 aaKnown RBP14.29□□□□□ -0.12
CACNB3-213ENST00000550064 OGFOD1Q8N543 542 aa14.29□□□□□ -0.12
CACNB3-213ENST00000550064 IGDCC4Q8TDY8 1250 aa14.29□□□□□ -0.12
CACNB3-213ENST00000550064 DYNLL2Q96FJ2 89 aa14.29□□□□□ -0.12
CACNB3-213ENST00000550064 PRMT6Q96LA8 375 aaPredicted RBP14.29□□□□□ -0.12
CACNB3-213ENST00000550064 SBF1O95248 1867 aa14.29□□□□□ -0.12
CACNB3-213ENST00000550064 DICER1Q9UPY3 1922 aaKnown RBP14.29□□□□□ -0.12
CACNB3-213ENST00000550064 YBX3P16989 372 aaKnown RBP eCLIP14.28□□□□□ -0.12
CACNB3-213ENST00000550064 LMNB1P20700 586 aa14.28□□□□□ -0.12
CACNB3-213ENST00000550064 EVCP57679 992 aa14.28□□□□□ -0.12
CACNB3-213ENST00000550064 PDE4BQ07343 736 aa14.28□□□□□ -0.12
CACNB3-213ENST00000550064 ST3GAL1Q11201 340 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms