RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 ALS2Q96Q42 1657 aa13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 CSF1RP07333 972 aa13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 HSPA2P54652 639 aa13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 MNS1Q8NEH6 495 aa13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 hCG_1642624A0A1W2PR95 340 aa13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 POLR2DO15514 142 aaKnown RBP13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 PDE8BO95263 885 aa13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 NR5A1Q13285 461 aa13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 SAFBQ15424 915 aaKnown RBP eCLIP13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 KRBA2Q6ZNG9 492 aa13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 DIS3L2Q8IYB7 885 aaKnown RBP13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 EPC1Q9H2F5 836 aa13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 LY9Q9HBG7 655 aa13.72□□□□□ -0.21
RAPGEF3-219ENST00000549151 LMTK3Q96Q04 1460 aa13.71□□□□□ -0.21
RAPGEF3-219ENST00000549151 ABCC6O95255 1503 aa13.71□□□□□ -0.21
RAPGEF3-219ENST00000549151 ERICH4A6NGS2 130 aa13.71□□□□□ -0.21
RAPGEF3-219ENST00000549151 ADKP55263 362 aaKnown RBP13.71□□□□□ -0.21
RAPGEF3-219ENST00000549151 TTF1Q15361 905 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF3-219ENST00000549151 GIGYF2Q6Y7W6 1299 aaKnown RBP13.71□□□□□ -0.21
RAPGEF3-219ENST00000549151 IGDCC4Q8TDY8 1250 aa13.71□□□□□ -0.21
RAPGEF3-219ENST00000549151 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.71□□□□□ -0.21
RAPGEF3-219ENST00000549151 IKBKBO14920 756 aa13.71□□□□□ -0.22
RAPGEF3-219ENST00000549151 CBFA2T2O43439 604 aa13.71□□□□□ -0.22
RAPGEF3-219ENST00000549151 ETF1P62495 437 aaKnown RBP13.71□□□□□ -0.22
RAPGEF3-219ENST00000549151 KLHL10Q6JEL2 608 aa13.71□□□□□ -0.22
RAPGEF3-219ENST00000549151 IFNL3Q8IZI9 196 aa13.71□□□□□ -0.22
RAPGEF3-219ENST00000549151 STRBPQ96SI9 672 aaKnown RBP13.71□□□□□ -0.22
RAPGEF3-219ENST00000549151 RIC1Q4ADV7 1423 aa13.71□□□□□ -0.22
RAPGEF3-219ENST00000549151 TJP1Q07157 1748 aa13.71□□□□□ -0.22
RAPGEF3-219ENST00000549151 PSDA5PKW4 1024 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 RESP18Q5W5W9 173 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 UBXN4Q92575 508 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 MAP3K14Q99558 947 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 EPB41L4AQ9HCS5 686 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 FAM217BQ9NTX9 383 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 SERTAD1Q9UHV2 236 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 TUBE1Q9UJT0 475 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 HPSEQ9Y251 543 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 ZBTB1Q9Y2K1 713 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 MINDY4BA8MYZ0 360 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 PPP6R2O75170 966 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 NTRK3Q16288 839 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 MAP3K15Q6ZN16 1313 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 MFSD6Q6ZSS7 791 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 CARD6Q9BX69 1037 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 MORC2Q9Y6X9 1032 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 BMP6P22004 513 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 TMEM87BQ96K49 555 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 NFE2L3Q9Y4A8 694 aa13.7□□□□□ -0.22
RAPGEF3-219ENST00000549151 COL18A1P39060 1754 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 CUTAO60888 179 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 UBE3CQ15386 1083 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 USP49Q70CQ1 688 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 TICAM2Q86XR7 235 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 CREBRFQ8IUR6 639 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 NOSTRINQ8IVI9 506 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 TRIM22Q8IYM9 498 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 CPLX3Q8WVH0 158 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 TIGD1Q96MW7 591 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 DESI2Q9BSY9 194 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 ZNF446Q9NWS9 450 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 GLI3P10071 1580 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 STX17P56962 302 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 GNG11P61952 73 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 BRINP3Q76B58 766 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 SPATA5Q8NB90 893 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 PCDHB6Q9Y5E3 794 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 TACC3Q9Y6A5 838 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 SLC4A4Q9Y6R1 1079 aa13.69□□□□□ -0.22
RAPGEF3-219ENST00000549151 CASP1P29466 404 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 AFMP43652 599 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 MAP3K12Q12852 859 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 RASGRF1Q13972 1273 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 RTN1Q16799 776 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 VSTM4Q8IW00 320 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 OXER1Q8TDS5 423 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 MPHOSPH8Q99549 860 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 CABP5Q9NP86 173 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 MYO5AQ9Y4I1 1855 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 ERICH2A1L162 156 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 SMIM22K7EJ46 135 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 CLCN6P51797 869 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 TRIM28Q13263 835 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 WTAPQ15007 396 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 KARSQ15046 597 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 ZSWIM4Q9H7M6 989 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 SEC31BQ9NQW1 1179 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 ABCF2Q9UG63 623 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 LAMB4A4D0S4 1761 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 COBLO75128 1261 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 POSTNQ15063 836 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 LCORLQ8N3X6 602 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 L2HGDHQ9H9P8 463 aa13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 SAMSN1Q9NSI8 373 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-219ENST00000549151 MAN1B1Q9UKM7 699 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms